BS02313.complete Sequence
2278 bp assembled on 2008-08-14
> BS02313.complete
GAAGTTATCAGTCGACATGTCGGCGGCCGCTTGCCTACTGTCTTCTTCTA
CTTCTTCGTTCGAGAAGACCTGCCGCATCTGCCACAAGGCCTTCGCGAAC
GTCTACCGCCTGCAGAGGCACATGATCAGCCACGACGAGAGTGCGCTGCT
GCGGAAGTTTAAGTGCAAGGAGTGCGACAAGGCCTTCAAGTTCAAGCACC
ACCTCAAGGAGCACGTGAGGATCCATTCCGGCGAGAAGCCCTTCGGATGC
GACAACTGCGGCAAGCGATTCTCGCACTCGGGCAGCTTCTCCTCCCACAT
GACCTCCAAGAAGTGCATCAGCATGGGCCTCAAGCTGAACAACAATCGCG
CTCTGCTGAAGCGACTGGAGAAGAGCCCGGGATCCGCATCCTCCGCATCC
CGGCGATCGCCCTCCGATCACGGAAAGGGCAAGCTGCCGGAGCAGCCGTC
GCTACCGGGACTACCACATCCGATGAGCTACTTCGCCAGCGATGCGCAGG
TGCAAGGTGGAAGTGCGGCACCCGCGCCCTTCCCGCCATTCCATCCGAAC
TACATGAACGCGGCCCTGCTCGCCTTTCCCCACAACTTTATGGCGGCTGC
AGCTGGCCTGGATCCTCGGGTGCATCCCTACAGCATCCAGAGGCTGCTGC
AACTTTCCGCCGCCGGTCAGCAGCAGAGGGAGGAGGAGCGTGAGGAGCAG
CAAAAGCAGCAGCAGCATGATGAGGAGGAGACCCCCGATGAGCCCAAGCT
AGTGATGGATATCGAGGAGCCAGAGACCAAGGAGATGGCACCCACGCCAG
AGGCCACCGAAGCAGCCACTCCCATTAAGCGGGAGGAGAGCAGGGAAGCC
TCTCCCGATCCAGAGAGCTACCGTTCCTCCTCGCAAGCAATCAAACAAGA
GCAGGAGCCCCTGAACGTAGCAGAGGAACGTCAAACTCCTGTGGAAGAAC
ACGCCCCCGTGGAGCATGCCGCTGATCTGCGCTGCAGTCGCTGCTCCAAG
CAGTTCAATCATCCCACTGAGCTGGTGCAGCACGAGAAGGTGCTTTGTGG
CCTGATCAAGGAGGAGCTGGAGCAGCACTTCCAACAGCAACAGGCCACGT
CCTTTGCCTTGGCCTCCGCCAGCGAAGAGGACGAGGAAGACGAGGAGATG
GATGTGGAGGAGGAGCCCCGCCAGGAGAGTGGCGAACGGAAAGTCCGCGT
GCGAACGGCCATCAACGAGGAGCAGCAGCAGCAGTTGAAGCAGCACTACT
CCCTGAACGCTCGACCCAGTAGGGATGAGTTCCGAATGATAGCAGCTCGT
CTGCAGCTGGATCCCCGAGTGGTTCAAGTGTGGTTCCAGAACAACCGCTC
CAGGGAGCGCAAAATGCAGAGTTTCCAGAACAATCAGGCGGCAGGCGCAG
CACCGCCAATGCCCATTGACTCCCAGGCATCTCTAACCCGGGAGGATCAA
CCGCTGGACTTGTCCGTGAAGAGAGATCCCCTCACGCCGAAGAGTGAGAG
CTCGCCTCCGTATATAGCTCCACCGTCGGGAGAAGCCCTCAATCCCGAAG
CAATCAATCTCAGCAGGAAGTTCTCCACATCCGCATCGATGTCGCCGGCC
TCGATTTCACCGTCATCCGCGGCAGCCCTCTACTTTGGTGCTGCCCCGCC
GCCTTCGCCCCCAAATAGCCAACTGGATTCCACTCCTCGCAGTGGCCAGG
CCTTTCCGGGACTACCTCCCTACATGCTGCCCATGTCGCTGCCCATGGAG
GCGCTGTTTAAGATGCGCCCGGGCGGAGACTTCGCTTCCAACCATGCCTT
GATGAACAGTATTAAGCTGCCCGATTACCGGGGCACCAGCTTGAGTCCCG
GTGGATCGGAGAAGCGTTCGTGGCGGGACGACGACTCGCGCATCTCACAC
GAGGACGAGTTCGGCGCCGGCGTTCTGATGCCACCGAAACCGCGTAGGGG
CAAGGCGGAGACCCATGGACACGCTGGCGATCCCGATCTGCCCTATGTGT
GCGATCAGTGCGACAAGGCCTTCGCCAAGCAGAGTTCGCTGGCGCGACAC
AAATACGAGCATTCCGGTCAACGACCCTACCAGTGCATAGAGTGTCCGAA
GGCCTTCAAGCACAAGCACCACCTCACGGAGCACAAGCGTCTGCACAGCG
GCGAGAAGCCCTTTCAGTGCTCCAAGTGCCTGAAGCGCTTCTCGCACTCG
GGCAGCTACAGCCAGCACATGAACCACCGGTATTCCTATTGCAAGCCCTA
CAGGGAATAGCGAAGCTTTCTAGACCAT
BS02313.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:33:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zfh1-RA | 2244 | CG1322-PA | 1..2244 | 17..2260 | 11220 | 100 | Plus |
| zfh1-RB | 3165 | CG1322-PB | 971..3165 | 66..2260 | 10975 | 100 | Plus |
| zfh1-RE | 3621 | CG1322-PE | 971..3165 | 66..2260 | 10975 | 100 | Plus |
| zfh1-RA | 2244 | CG1322-PA | 163..271 | 2099..2207 | 200 | 78.9 | Plus |
| zfh1-RA | 2244 | CG1322-PA | 2083..2191 | 179..287 | 200 | 78.9 | Plus |
| zfh1-RB | 3165 | CG1322-PB | 1084..1192 | 2099..2207 | 200 | 78.9 | Plus |
| zfh1-RB | 3165 | CG1322-PB | 3004..3112 | 179..287 | 200 | 78.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:33:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zfh1-RA | 3560 | CG1322-RA | 343..2586 | 17..2260 | 11220 | 100 | Plus |
| zfh1-RB | 6522 | CG1322-RB | 1329..3523 | 66..2260 | 10975 | 100 | Plus |
| zfh1-RE | 6522 | CG1322-RE | 1329..3523 | 66..2260 | 10975 | 100 | Plus |
| zfh1-RA | 3560 | CG1322-RA | 505..613 | 2099..2207 | 200 | 78.9 | Plus |
| zfh1-RA | 3560 | CG1322-RA | 2425..2533 | 179..287 | 200 | 78.9 | Plus |
| zfh1-RB | 6522 | CG1322-RB | 1442..1550 | 2099..2207 | 200 | 78.9 | Plus |
| zfh1-RB | 6522 | CG1322-RB | 3362..3470 | 179..287 | 200 | 78.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:33:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30783941..30785943 | 66..2068 | 10015 | 100 | Plus |
| 3R | 32079331 | 3R | 30786009..30786203 | 2066..2260 | 975 | 100 | Plus |
| 3R | 32079331 | 3R | 30783600..30783650 | 17..67 | 255 | 100 | Plus |
| 3R | 32079331 | 3R | 30784054..30784162 | 2099..2207 | 200 | 78.9 | Plus |
| 3R | 32079331 | 3R | 30786042..30786150 | 179..287 | 200 | 78.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:33:08 has no hits.
BS02313.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:18:30 Download gff for
BS02313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zfh1-RA | 333..2592 | 6..2266 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:54:30 Download gff for
BS02313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zfh1-RA | 343..2587 | 17..2262 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:04:51 Download gff for
BS02313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zfh1-RA | 343..2587 | 17..2262 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:29 Download gff for
BS02313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zfh1-RA | 343..2587 | 17..2262 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:29 Download gff for
BS02313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30783600..30783650 | 17..67 | 100 | -> | Plus |
| 3R | 30783943..30785941 | 68..2066 | 100 | -> | Plus |
| 3R | 30786010..30786204 | 2067..2262 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:54:30 Download gff for
BS02313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26609322..26609372 | 17..67 | 100 | -> | Plus |
| arm_3R | 26609665..26611663 | 68..2066 | 100 | -> | Plus |
| arm_3R | 26611732..26611926 | 2067..2262 | 99 | | Plus |
BS02313.pep Sequence
Translation from 16 to 2259
> BS02313.pep
MSAAACLLSSSTSSFEKTCRICHKAFANVYRLQRHMISHDESALLRKFKC
KECDKAFKFKHHLKEHVRIHSGEKPFGCDNCGKRFSHSGSFSSHMTSKKC
ISMGLKLNNNRALLKRLEKSPGSASSASRRSPSDHGKGKLPEQPSLPGLP
HPMSYFASDAQVQGGSAAPAPFPPFHPNYMNAALLAFPHNFMAAAAGLDP
RVHPYSIQRLLQLSAAGQQQREEEREEQQKQQQHDEEETPDEPKLVMDIE
EPETKEMAPTPEATEAATPIKREESREASPDPESYRSSSQAIKQEQEPLN
VAEERQTPVEEHAPVEHAADLRCSRCSKQFNHPTELVQHEKVLCGLIKEE
LEQHFQQQQATSFALASASEEDEEDEEMDVEEEPRQESGERKVRVRTAIN
EEQQQQLKQHYSLNARPSRDEFRMIAARLQLDPRVVQVWFQNNRSRERKM
QSFQNNQAAGAAPPMPIDSQASLTREDQPLDLSVKRDPLTPKSESSPPYI
APPSGEALNPEAINLSRKFSTSASMSPASISPSSAAALYFGAAPPPSPPN
SQLDSTPRSGQAFPGLPPYMLPMSLPMEALFKMRPGGDFASNHALMNSIK
LPDYRGTSLSPGGSEKRSWRDDDSRISHEDEFGAGVLMPPKPRRGKAETH
GHAGDPDLPYVCDQCDKAFAKQSSLARHKYEHSGQRPYQCIECPKAFKHK
HHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE*
BS02313.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:09:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zfh1-PA | 747 | CG1322-PA | 1..747 | 1..747 | 3965 | 100 | Plus |
| zfh1-PB | 1054 | CG1322-PB | 317..1054 | 10..747 | 3893 | 99.1 | Plus |
| zfh1-PE | 1206 | CG1322-PE | 317..1054 | 10..747 | 3893 | 99.1 | Plus |
| gl-PA | 604 | CG7672-PA | 308..568 | 490..735 | 245 | 29.9 | Plus |
| gl-PC | 679 | CG7672-PC | 308..568 | 490..735 | 245 | 29.9 | Plus |
| zfh1-PB | 1054 | CG1322-PB | 315..405 | 651..738 | 240 | 51.6 | Plus |
| zfh1-PE | 1206 | CG1322-PE | 315..405 | 651..738 | 240 | 51.6 | Plus |
| gl-PA | 604 | CG7672-PA | 439..545 | 19..122 | 178 | 33.6 | Plus |
| gl-PA | 604 | CG7672-PA | 495..568 | 19..95 | 161 | 40.3 | Plus |
