BS02528.complete Sequence
1324 bp (1324 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ634669
> BS02528.complete
GAAGTTATCAGTCGACATGAACCAGACATGCAAAGTGTGCGGTGAGCCGG
CGGCGGGCTTCCATTTTGGCGCCTTCACCTGCGAGGGCTGCAAGTCCTTC
TTTGGCCGCTCTTACAACAACATCAGCACCATCAGCGAGTGCAAGAACGA
GGGCAAGTGCATCATCGACAAGAAGAACCGCACCACCTGCAAGGCGTGCC
GCTTGAGGAAGTGCTACAACGTGGGCATGTCGAAGGGGGGATCCCGCTAC
GGACGTCGCTCCAACTGGTTCAAGATCCATTGTCTGCTGCAGGAGCACGA
ACAGGCCGCCGCAGCGGCGGGCAAGGCGCCTCCATTAGCGGGTGGCGTAT
CGGTGGGTGGTGCCCCGTCGGCCTCTTCCCCGGTGGGCTCGCCACACACT
CCCGGATTTGGGGACATGGCCGCCCATTTGCACCACCATCATCAGCAGCA
GCAGCAGCAGCAGGTGCCGCGTCATCCACATATGCCTCTGCTGGGCTATC
CCAGCTATCTGTCCGACCCATCCGCCGCCCTGCCCTTCTTCAGCATGATG
GGCGGTGTACCGCACCAGTCGCCCTTCCAGCTGCCCCCACACCTCCTCTT
CCCAGGCTACCATGCAAGTGCTGCCGCTGCAGCGGCTTCTGCTGCCGATG
CCGCTTACCGGCAGGAGATGTACAAGCACCGCCAGAGCGTGGATTCCGTT
GAGTCGCAGAACCGCTTTAGTCCCGCCAGCCAGCCACCAGTGGTGCAGCC
CACCTCCTCGGCCCGCCAGTCGCCCATCGATGTCTGCCTGGAGGAGGATG
TTCACTCCGTGCACAGCCATCAGTCGTCCGCAAGCCTCCTGCATCCCATT
GCCATCCGAGCCACGCCAACCACTCCGACTAGCAGCAGCCCGCTGAGTTT
TGCGGCCAAGATGCAGAGCTTGTCGCCCGTTTCGGTTTGCTCCATTGGCG
GCGAAACCACCAGCGTTGTACCAGTGCATCCTCCCACCGTTTCCGCTCAA
GAAGGACCCATGGATCTGAGCATGAAGACCTCGCGGAGCTCCGTGCACAG
CTTCAACGACAGCGGCTCCGAGGATCAAGAAGTGGAGGTGGCTCCGCGCC
GGAAGTTCTACCAACTGGAGGCCGAGTGCCTGACCACCAGCAGCAGCAGT
TCCTCCCACTCCGCCGCCCACTCACCGAACACCACCACCGCCCATGCGGA
AGTCAAGCGGCAGAAGCTAGGTGGTGCAGAGGCCACCCACTTCGGTGGCT
TCGCGGTGGCCCACAATGCGGCTAGTGCCATGAGGGGAATATTCGTGTGT
GTCTAACGAAGCTTTCTAGACCAT
BS02528.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:39:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
kni-RB | 1305 | CG4717-PB | 16..1305 | 17..1306 | 6450 | 100 | Plus |
kni-RA | 1290 | CG4717-PA | 1..1290 | 17..1306 | 6450 | 100 | Plus |
knrl-RB | 1944 | CG4761-PB | 28..308 | 17..297 | 730 | 84 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:39:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
kni-RB | 1911 | CG4717-RB | 116..1405 | 17..1306 | 6450 | 100 | Plus |
kni-RA | 2100 | CG4717-RA | 305..1594 | 17..1306 | 6450 | 100 | Plus |
knrl-RB | 2925 | CG4761-RB | 992..1272 | 17..297 | 730 | 84 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:39:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20692836..20694049 | 1306..93 | 6070 | 100 | Minus |
3L | 28110227 | 3L | 20599778..20599982 | 297..93 | 515 | 83.4 | Minus |
3L | 28110227 | 3L | 20694263..20694340 | 94..17 | 390 | 100 | Minus |
3L | 28110227 | 3L | 21816347..21816480 | 164..297 | 355 | 84.3 | Plus |
3L | 28110227 | 3L | 20602193..20602270 | 94..17 | 225 | 85.9 | Minus |
3L | 28110227 | 3L | 21814779..21814856 | 17..94 | 195 | 83.3 | Plus |
Blast to na_te.dros performed 2014-11-26 21:39:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2443..2519 | 113..192 | 150 | 67.5 | Plus |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 596..728 | 523..650 | 113 | 60.6 | Plus |
BS02528.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:29:54 Download gff for
BS02528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kni-RA | 1..1290 | 17..1306 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:13:22 Download gff for
BS02528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kni-RA | 290..1579 | 17..1306 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:32:57 Download gff for
BS02528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kni-RA | 305..1595 | 17..1308 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:29:54 Download gff for
BS02528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kni-RA | 290..1579 | 17..1306 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:58 Download gff for
BS02528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kni-RA | 305..1595 | 17..1308 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:38:58 Download gff for
BS02528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20692835..20694047 | 95..1308 | 99 | <- | Minus |
3L | 20694263..20694340 | 17..94 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:32:57 Download gff for
BS02528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20685935..20687147 | 95..1308 | 99 | <- | Minus |
arm_3L | 20687363..20687440 | 17..94 | 100 | | Minus |
BS02528.pep Sequence
Translation from 16 to 1305
> BS02528.pep
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCII
DKKNRTTCKACRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAA
AGKAPPLAGGVSVGGAPSASSPVGSPHTPGFGDMAAHLHHHHQQQQQQQV
PRHPHMPLLGYPSYLSDPSAALPFFSMMGGVPHQSPFQLPPHLLFPGYHA
SAAAAAASAADAAYRQEMYKHRQSVDSVESQNRFSPASQPPVVQPTSSAR
QSPIDVCLEEDVHSVHSHQSSASLLHPIAIRATPTTPTSSSPLSFAAKMQ
SLSPVSVCSIGGETTSVVPVHPPTVSAQEGPMDLSMKTSRSSVHSFNDSG
SEDQEVEVAPRRKFYQLEAECLTTSSSSSSHSAAHSPNTTTAHAEVKRQK
LGGAEATHFGGFAVAHNAASAMRGIFVCV*
BS02528.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:30:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
kni-PB | 434 | CG4717-PB | 6..434 | 1..429 | 2276 | 100 | Plus |
kni-PA | 429 | CG4717-PA | 1..429 | 1..429 | 2276 | 100 | Plus |
knrl-PB | 647 | CG4761-PB | 10..128 | 1..116 | 503 | 78.2 | Plus |
knrl-PA | 647 | CG4761-PA | 10..128 | 1..116 | 503 | 78.2 | Plus |
eg-PA | 373 | CG7383-PA | 1..118 | 1..120 | 470 | 71.7 | Plus |