BS02530.complete Sequence
1324 bp (1324 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634670
> BS02530.complete
GAAGTTATCAGTCGACATGTCGTCGACATCGACGGCTGCAGCGAACGCAG
CGCCAGCGAAGACGGAGGTGCGGTACGTGACCGAGGTGCCCAGCAGTCTG
AAGCAACTGGCGCGCCTCGTGGTCCGTGGATTCTATTCCCTGGAGGATGC
GCTTATCATCGACATGCTGGTGCGGAATCCCTGCATGAAGGAGGACGACA
TCGGCGAGCTGTTGCGCTTCGAGAAGAAGCAGTTAAGGGCCCGGATAACC
ACGCTGCGCACCGACAAGTTCATCCAGATCAGGCTTAAAATGGAAACGGG
GCCGGATGGTAAGGCGCAGAAGGTCAATTACTACTTCATCAACTACAAGA
CCTTCGTGAACGTGGTGAAGTACAAGCTGGATCTCATGCGCAAGCGTATG
GAGACGGAGGAGCGTGATGCCACCAGTAGAGCAAGTTTTAAGTGCTCTTC
GTGTTCCAAAACATTCACGGACCTCGAAGCGGACCAGCTGTTCGACATGG
CCACGCTGGAGTTCCGGTGCACCTTCTGCGGCAGTTCCGTGGAGGAGGAC
AGCGCCGCCATGCCCAAGAAAGACTCCCGCCTAATGCTAGCGCACTTCAA
CGAGCAGCTGCAGCCACTGTACGACCTGCTCCGTGAGGTGGAGGGCATCA
AGCTGGCGCCAGAGGTGCTCGAACCGGAGCCCGTGGACATCGACACCATT
CGAGGACTGAACAAACCCAACGCCACGCGACCGGACGGCATGGCGTGGTC
GGGTGAGGCGACGAGAAACCAGGGCTTTGCCGTGGAGGAAACTCGTGTGG
ACGTCACCATTGGCGGCGACGACACCTCGGATGCGGTGATTGAGCGCAAG
TCGCGCCCCATTTGGATGACAGAGAGCACTGTGATAACCGACACGGATGC
TGCCGATGGCGCGGCCGATGCGGTGCAGACGGCAAGCGGATCTGGGCATC
GCAACCGAAAGGAAAACGAGGACATCATGTCCGTGCTGCTGCAGCATGAG
AAGCAGCCGGGCCAGAAGGAGCCGCATATGAAGGGTATGCGAGTGGGCTC
ATCGAACGCCAACTCTAGCGATTCCAGCGACGACGAAAAGGACATCGAAA
ATTCCAAGATTCCTGATGTCGACTTCGACAATTATATCAACTCAGATTCC
GCGGAGGAGGACGACGATGTGCCCACTGTGCTAGTGGCTGGACGACCGCA
TCCGCTCGACCAACTGGACGACAACCTGATAGCCCAGATGACGCCGCAGG
AGAAGGAGAACTACATACACGTATACCAGCAGCACTACAGCCATATATTC
GAATGACGAAGCTTTCTAGACCAT
BS02530.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:03:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIEalpha-RA | 1290 | CG10415-PA | 1..1290 | 17..1306 | 6450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:03:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIEalpha-RA | 1622 | CG10415-RA | 197..1486 | 17..1306 | 6450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:03:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11682312..11683407 | 17..1112 | 5480 | 100 | Plus |
| 3L | 28110227 | 3L | 11683476..11683669 | 1113..1306 | 970 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 11:03:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TAHRE | 10463 | TAHRE OSV 10463bp | 1844..1908 | 249..187 | 113 | 66.2 | Minus |
BS02530.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:24 Download gff for
BS02530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIEalpha-RA | 1..1290 | 17..1306 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:06 Download gff for
BS02530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIEalpha-RA | 203..1502 | 9..1312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:09:01 Download gff for
BS02530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIEalpha-RA | 197..1487 | 17..1308 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:24 Download gff for
BS02530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIEalpha-RA | 192..1491 | 9..1312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:37:43 Download gff for
BS02530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIEalpha-RA | 197..1487 | 17..1308 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:37:43 Download gff for
BS02530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11682312..11683407 | 17..1112 | 100 | -> | Plus |
| 3L | 11683476..11683670 | 1113..1308 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:09:01 Download gff for
BS02530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11675412..11676507 | 17..1112 | 100 | -> | Plus |
| arm_3L | 11676576..11676770 | 1113..1308 | 99 | | Plus |
BS02530.pep Sequence
Translation from 16 to 1305
> BS02530.pep
MSSTSTAAANAAPAKTEVRYVTEVPSSLKQLARLVVRGFYSLEDALIIDM
LVRNPCMKEDDIGELLRFEKKQLRARITTLRTDKFIQIRLKMETGPDGKA
QKVNYYFINYKTFVNVVKYKLDLMRKRMETEERDATSRASFKCSSCSKTF
TDLEADQLFDMATLEFRCTFCGSSVEEDSAAMPKKDSRLMLAHFNEQLQP
LYDLLREVEGIKLAPEVLEPEPVDIDTIRGLNKPNATRPDGMAWSGEATR
NQGFAVEETRVDVTIGGDDTSDAVIERKSRPIWMTESTVITDTDAADGAA
DAVQTASGSGHRNRKENEDIMSVLLQHEKQPGQKEPHMKGMRVGSSNANS
SDSSDDEKDIENSKIPDVDFDNYINSDSAEEDDDVPTVLVAGRPHPLDQL
DDNLIAQMTPQEKENYIHVYQQHYSHIFE*
BS02530.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIEalpha-PA | 429 | CG10415-PA | 1..429 | 1..429 | 2208 | 100 | Plus |
