BS02592.complete Sequence
1675 bp (1675 high quality bases) assembled on 2006-03-24
GenBank Submission: FJ634674
> BS02592.complete
GAAGTTATCAGTCGACATGACGCTGGACAGCTACAACATCTTCAACGATG
AGTACTTGTTCAACATGCCGCTGTCGCCGCTGCCAAAAGTGCTCGGCAAC
TTTGAGACCGGCCAGAGTGTTCTCACACTGACGACGCCCACGTTGACGCC
GACCACCACGCGCAACATCGAGGACACACTGGGCCACTTGCTCTCGGACA
CGCAGACCGATCGTGTGGCTGGTTGCGCGGGATTCGCAGTGCCAAAGGTG
CTACCCAACGCCATTGATGTCCTGGGCATGGGTATTCCCACCGGTGTTTC
GTCGCTCCCACTTCAGCAGACATTCGATTTGAGCCTGGGGCAGGGCAGCG
AGTCCGAGGACTCCAACGCTTCGTACAACGATACGCAGATGAACGAGGAG
CAGGACACGACCGATACTTCAAGTGCCCATACGGACAGCACCTCGTACCA
AGCTGGCCACATCATGGCGGGCAGCGTGAACGGCGGCGGTGTCAACAACT
TCTCCAATGTCCTGGCCGCCGTGAGCTCTAGCCGCGGATCGGCGTCGGTG
GGCAGCAGCAACGCGAATACCTCAAATACGCCGGCTCGTCGTGGCGGCGG
CAGACGCCCCAACCGGTCGACGAACATGACCCCGGAGGAGGAGCAGAAGC
GGGCCGTGCGCCGGGAGCGGAACAAACAGGCGGCGGCCCGTTGCCGCAAG
AGGCGCGTGGACCAGACCAACGAGCTCACCGAGGAGGTGGAGCAGCTGGA
GAAGCGGGGCGAGAGCATGCGCAAGGAGATCGAGGTGCTGACGAACAGCA
AGAATCAGCTGGAGTACCTTCTGGCCACCCACCGGGCCACCTGCCAAAAG
ATTCGCTCCGACATGCTGAGCGTGGTCACCTGCAACGGTCTGATTGCCCC
GGCCGGACTCCTGAGCGCCGGGAGCAGCGGCAGCGGCGCGAGCAGCCACC
ACAACCACAACAGCAACGACAGCAGCAACGGCACGATCACCGGCATGGAC
GCCACGCTGAACTCCACCGGGAGGAGCAATTCACCCTTGGATCTCAAGCC
GGCGGCGAACATCGATAGCCTGCTGATGCACATCAAGGACGAGCCACTCG
ATGGCGCCATCGACTCAGGATCCAGCCTGGACCAGGACGGTCCACCGCCC
AGCAAGCGCATCACCTTGCCGCCCATGTCCACGATGCCGCACGTTCACTT
GTCCACGATATTAACACCCACCGGCGCCTCGTCGGGATCTCTGCAGACGC
CGATCACGAGCACGGCGCCCGGCGGATTCGGCAGCGCCTTCCCGGTGACC
TCCAACGGCAGCAGCATCAACAACATCAACAGCATCGGCAACAACATGAA
CTCTCCCACGCTGAATGCGCATAACAAGGTGCCTAAGGAGCGGCCCAACA
CGTTGGCCTTCCAGCGTCCACTGGGCCAGATGCACCTCACCATGGCCAAC
AACAAGGCGGGTGGGCCCACGCAGATCCAGGGCGTGCCCATCCAGACGCC
CTCGACCGGCACCTTCAACTTTGACTCCCTGATGGACGGCGGCACTGGGC
TAACGCCCGTCTCCGGACCCCTCGTCCCGAACAGCTCCTCCACGAACAAG
CACCCGCTGGAGCTGCCCACGCCCACCGCCGAGCCGTCCAAGCTGGTCAG
CTTATAACGAAGCTTTCTAGACCAT
BS02592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:48:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kay-RB | 1641 | CG33956-PB | 1..1641 | 17..1657 | 7950 | 99 | Plus |
| kay-RF | 2268 | CG33956-PF | 702..2268 | 91..1657 | 7580 | 98.9 | Plus |
| kay-RG | 1941 | CG33956-PG | 376..1941 | 92..1657 | 7575 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kay-RB | 3194 | CG33956-RB | 465..2106 | 17..1658 | 7955 | 99 | Plus |
| kay-RF | 4574 | CG33956-RF | 1919..3486 | 91..1658 | 7585 | 98.9 | Plus |
| kay-RG | 3738 | CG33956-RG | 1084..2650 | 92..1658 | 7580 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29791787..29793025 | 420..1658 | 5970 | 98.8 | Plus |
| 3R | 32079331 | 3R | 29791392..29791720 | 91..419 | 1615 | 99.4 | Plus |
| 3R | 32079331 | 3R | 29783073..29783147 | 17..91 | 375 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:48:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2353..2468 | 914..1029 | 193 | 62.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2907..3024 | 919..1027 | 164 | 64.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1073..1161 | 919..1004 | 159 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1539..1578 | 1312..1351 | 146 | 85 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2409 | 1303..1351 | 146 | 77.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1505..1564 | 937..995 | 144 | 73.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2472..2528 | 1303..1359 | 141 | 71.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2430..2473 | 1303..1346 | 139 | 79.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1060..1140 | 918..995 | 136 | 68.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2869..2974 | 914..1014 | 132 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2582..2662 | 906..983 | 127 | 65.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2848 | 941..1028 | 126 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1493..1551 | 1294..1351 | 121 | 69.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2841 | 952..1006 | 113 | 67.3 | Plus |
BS02592.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:39:56 Download gff for
BS02592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kay-RB | 1..1641 | 17..1657 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:26:04 Download gff for
BS02592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kay-RB | 463..2104 | 17..1658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:58 Download gff for
BS02592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kay-RB | 465..2106 | 17..1659 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:39:56 Download gff for
BS02592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kay-RB | 463..2104 | 17..1658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:27:44 Download gff for
BS02592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kay-RB | 465..2106 | 17..1659 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:27:44 Download gff for
BS02592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29783073..29783147 | 17..91 | 100 | -> | Plus |
| 3R | 29791393..29791720 | 92..419 | 99 | -> | Plus |
| 3R | 29791787..29793025 | 420..1659 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:58 Download gff for
BS02592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25617115..25617442 | 92..419 | 99 | -> | Plus |
| arm_3R | 25608795..25608869 | 17..91 | 100 | -> | Plus |
| arm_3R | 25617509..25618747 | 420..1659 | 98 | | Plus |
BS02592.pep Sequence
Translation from 16 to 1656
> BS02592.pep
MTLDSYNIFNDEYLFNMPLSPLPKVLGNFETGQSVLTLTTPTLTPTTTRN
IEDTLGHLLSDTQTDRVAGCAGFAVPKVLPNAIDVLGMGIPTGVSSLPLQ
QTFDLSLGQGSESEDSNASYNDTQMNEEQDTTDTSSAHTDSTSYQAGHIM
AGSVNGGGVNNFSNVLAAVSSSRGSASVGSSNANTSNTPARRGGGRRPNR
STNMTPEEEQKRAVRRERNKQAAARCRKRRVDQTNELTEEVEQLEKRGES
MRKEIEVLTNSKNQLEYLLATHRATCQKIRSDMLSVVTCNGLIAPAGLLS
AGSSGSGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKPAANID
SLLMHIKDEPLDGAIDSGSSLDQDGPPPSKRITLPPMSTMPHVHLSTILT
PTGASSGSLQTPITSTAPGGFGSAFPVTSNGSSINNINSIGNNMNSPTLN
AHNKVPKERPNTLAFQRPLGQMHLTMANNKAGGPTQIQGVPIQTPSTGTF
NFDSLMDGGTGLTPVSGPLVPNSSSTNKHPLELPTPTAEPSKLVSL*
BS02592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:58:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kay-PB | 546 | CG33956-PB | 1..546 | 1..546 | 2807 | 100 | Plus |
| kay-PA | 595 | CG33956-PA | 74..595 | 25..546 | 2676 | 99.8 | Plus |
| kay-PG | 646 | CG33956-PG | 126..646 | 26..546 | 2673 | 100 | Plus |
| kay-PF | 755 | CG33956-PF | 235..755 | 26..546 | 2673 | 100 | Plus |
| kay-PD | 722 | CG33956-PD | 202..722 | 26..546 | 2673 | 100 | Plus |
