Clone BS02951 Report

Search the DGRC for BS02951

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:29
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptdally-RA
Protein status:BS02951.pep: full length peptide match
Sequenced Size:1913

Clone Sequence Records

BS02951.3prime Sequence

785 bp (648 high quality bases) assembled on 2005-11-30

> BS02951.3prime
ATGGTCTAGAAAGCTTTTAACTACAGCTACTAAAGAGCATTGTGACTAGA
GTGAGGAGCATCCACGTCGCGGTGCCTTCCAGTGGGTTGGACCCACTGGT
CTTGCCGCTGTCACGCGACTCCACTTCGTTGGTGGTGGTGCCTTCGGATT
CCTCGATGGGCGTATGGGGTCCATCGCCGGAACCATCTCCGGAACCATGT
GCGCCTCCATACTCCTCCTCATCGTCGCCGATCTGACCTTCTCCGCCGCC
GGAGCCCTCACCCATATCATTCTGGATGTCGTGCGTCGCCTGTATGCTGT
TGGAAGGTGCCGCAGCTCCAATGCTCTTGCGAATCTTGAAGAGCTTGTCG
ACCAGCTCGTTCAGCTTGCCGGTCTGAGCCTTCGCATTGAAGGGCACCTC
GGGATTATATCGCTGGCTATCAGTGCCCGGATTAATCAGCAGCTGAGTGT
AGTCCCCGAAACGATCGCCTGACCAGCAGGAGTGATCGTCACGAGAGTGC
TGTTGCTCATCGCAGAAGTTGTCCACGATGGTCGTGTAGAACTCCTTGCT
CTTGTCGATGGTGGACAGGAAGAGGACCATGCCCGGATCCGGGTCAGTGG
CCCACTTTACGTTGTTCTTGTGGGGCGGAGGCCGCGCATCCGGTTCTCCG
GACGAATAGGGCGTCAGGCTGGGCGTGCCACATGTCTTCTTTACCTTTTT
TTCCAGTTCAGGCCCATTGTGCATGGGAACCATGATTGCCTCAGAGAAAA
TAATCTGCAGGTGTTTGATGACTTTAATGATGCCC

BS02951.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG4974-PA 1881 dally-RA 1149..1881 749..17 3615 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
dally-RB 4483 CG4974-RB 1842..2609 784..17 3750 99.3 Minus
dally-RA 3444 CG4974-RA 1842..2609 784..17 3750 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8888652..8888860 518..310 1045 100 Minus
3L 28110227 3L 8887957..8888134 696..519 890 100 Minus
3L 28110227 3L 8889163..8889318 172..17 780 100 Minus
3L 28110227 3L 8888923..8889063 311..171 705 100 Minus
3L 28110227 3L 8887197..8887290 784..691 380 93.6 Minus
Blast to na_te.dros performed on 2015-01-30 16:16:47 has no hits.

BS02951.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:19:52 Download gff for BS02951.3prime
Subject Subject Range Query Range Percent Splice Strand
dally-PA 1113..1881 17..785 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:32:33 Download gff for BS02951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4974-PA 1113..1881 17..785 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:23:36 Download gff for BS02951.3prime
Subject Subject Range Query Range Percent Splice Strand
dally-RA 1841..2609 17..785 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:50:20 Download gff for BS02951.3prime
Subject Subject Range Query Range Percent Splice Strand
dally-RA 1841..2609 17..785 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:50:20 Download gff for BS02951.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 8887196..8887286 695..785 93 -> Minus
3L 8887959..8888134 519..694 100 -> Minus
3L 8888652..8888859 311..518 100 -> Minus
3L 8888924..8889062 172..310 100 -> Minus
3L 8889164..8889318 17..171 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:23:36 Download gff for BS02951.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8882024..8882162 172..310 100 -> Minus
arm_3L 8882264..8882418 17..171 100   Minus
arm_3L 8880296..8880386 695..785 93 -> Minus
arm_3L 8881059..8881234 519..694 100 -> Minus
arm_3L 8881752..8881959 311..518 100 -> Minus

BS02951.5prime Sequence

505 bp (241 high quality bases) assembled on 2005-11-30

> BS02951.5prime
GAAGTTATCAGCCGACATGGCGGCCAGGAGCGTGCGGCTAGCGCAGCTTT
TGCTATTTACCCTGCTCTGCGGCTTCGTCGGCCTGTCAGCCGCCAAGCAC
CTGGACCTGGATGGTATCCACCACCACCAGCACCACCTGCACAGCGCCAC
CACGCACCACAGACGTCTCCTACAGCGGGACTCGCGGGCGAAGGACGCCG
TTGGGGGATCGACCCACCAGCGTGATGCCGTCAAGAGCTACTTCAAATCG
ATCGACATCAAGTCGAGTGGGACTTACAGCGAAAAAGGCGCCATTTGCGG
CGGAAACTGCTGCAACAATGCCACGGAGCTGGAGCTGCGGGACAAAGCCT
CCGGAATGTTCGAGCAACTGCTTCATCATCACACCAGCAGCCTGCGCGGA
GTCCTCGAGACGAATGCCAAACAGTTCCAAAGTCACGTCCTGGAATTGGC
GCAGATTTCGGAGAACATGACCCACTCGCTCTTTTCGAAGGTTTATACCC
CGTAT

BS02951.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:27:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG4974-PA 1881 dally-RA 1..484 17..500 2295 98.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:23:07
Subject Length Description Subject Range Query Range Score Percent Strand
dally-RB 4483 CG4974-RB 729..1212 17..500 2345 99 Plus
dally-RA 3444 CG4974-RA 729..1212 17..500 2345 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8828233..8828504 17..288 1315 98.9 Plus
3L 28110227 3L 8877156..8877303 286..433 710 98.6 Plus
3L 28110227 3L 8886275..8886343 432..500 345 100 Plus
Blast to na_te.dros performed on 2015-02-13 02:23:04 has no hits.

BS02951.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:19:53 Download gff for BS02951.5prime
Subject Subject Range Query Range Percent Splice Strand
dally-PA 1..488 17..505 98   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:32:34 Download gff for BS02951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4974-PA 1..488 17..505 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:47:47 Download gff for BS02951.5prime
Subject Subject Range Query Range Percent Splice Strand
dally-RA 721..1216 9..505 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:24:20 Download gff for BS02951.5prime
Subject Subject Range Query Range Percent Splice Strand
dally-RA 721..1216 9..505 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:24:20 Download gff for BS02951.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8828225..8828503 9..287 97 -> Plus
3L 8877158..8877301 288..431 98 -> Plus
3L 8886275..8886347 432..505 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:47:47 Download gff for BS02951.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8821325..8821603 9..287 97 -> Plus
arm_3L 8870258..8870401 288..431 98 -> Plus
arm_3L 8879375..8879447 432..505 98   Plus

BS02951.complete Sequence

1913 bp assembled on 2010-06-25

GenBank Submission: KX795981

> BS02951.complete
GAAGTTATCAGTCGACATGGCGGCCAGGAGCGTGCGGCTAGCGCAGCTTT
TGCTATTTACCCTGCTCTGCGGCTTCGTCGGCCTGTCAGCCGCCAAGCAC
CTGGACCTGGATGGTATCCACCACCACCAGCACCACCTGCACAGCGCCAC
CACGCACCACAGACGTCGCCTACAGCGGGACTCGCGGGCGAAGGACGCCG
TTGGGGGATCGACCCACCAGTGTGATGCCGTCAAGAGCTACTTCGAATCG
ATCGACATCAAGTCGAGTGGGACTTACAGCGAAAAAGGCGCCATTTGTGG
CGGAAACTGCTGCAACAATGCCACGGAGCTGGAGCTGCGGGACAAAGCCG
CCGGAATGTTCGAGCAACTGCTTCATCATCACACCAGCAGCCTGCGCGGA
GTCCTCGAGACGAATGCCAAACAGTTCCAAAGTCACGTCCTGGAATTGGC
GCAGATTTCGGAGAACATGACCCACTCGCTCTTTTCGAAGGTTTATACCC
GTATGGTGCCTTCATCGCGTATGATGATCCATCAACTGTACACCGAAATC
ATGAACCATCTGATTTACACCTCCAACTATACGAACAGCAATGGCCAACT
GGGCAGGCGAGGAATTGGCAGTGTCCAGAGCAACTTGGAGGAGGCTGTCA
GGCACTTCTTTGTTCAGTTGTTCCCCGTGGCCTACCACCAGATGGTCCAT
CTGTCCAAGAACAATTTGGGTGACTTGCACGAGGACTACGTTAACTGCCT
GCAGCACAACTTCGACGAGATGCATCCATTCGGGGACATTCCCCAGCAAG
TGCAGTCCAACTTGGGCAAGAGTGTCCATATGTCCAATGTCTTCATGAAT
GCCCTGCTCCAGGCCGCCGAGGTCCTCAGCGAAGCGGATGCCCTTTATGG
CGAACAACTGACGGACACGTGCAAACTGCATCTCCTCAAGATGCACTACT
GCCCCAACTGCAATGGACACCATTCAAGTTCTAGGAGCGAAACGAAATTG
TGCTACGGCTACTGCAAGAACGTAATGCGCGGCTGTTCGGCGGAATATGC
CGGACTACTGGACAGTCCCTGGTCAGGTGTAGTCGACTCCCTGAACAATC
TGGTCACCACCCATATTCTCTCGGACACCGGCATCATTAATGTCATCAAA
CACCTGCAGACTTATTTCTCTGAGGCAATCATGGCTGCCATGCACAATGG
GCCTGAACTGGAAAAAAAGGTAAAGAAGACATGTGGCACGCCCAGCCTGA
CGCCCTATTCGTCCGGAGAACCGGATGCGCGGCCTCCGCCCCACAAGAAC
AACGTAAAGTGGGCCACTGACCCGGATCCGGGCATGGTCCTCTTCCTGTC
CACCATCGACAAGAGCAAGGAGTTCTACACGACCATCGTGGACAACTTCT
GCGATGAGCAACAGCACTCTCGTGACGATCACTCCTGCTGGTCAGGCGAT
CGTTTCGGGGACTACACTCAGCTGCTGATTAATCCGGGCACTGATAGCCA
GCGATATAATCCCGAGGTGCCCTTCAATGCGAAGGCTCAGACCGGCAAGC
TGAACGAGCTGGTCGACAAGCTCTTCAAGATTCGCAAGAGCATTGGAGCT
GCGGCACCTTCCAACAGCATACAGGCGACGCACGACATCCAGAATGATAT
GGGTGAGGGCTCCGGCGGCGGAGAAGGTCAGATCGGCGACGATGAGGAGG
AGTATGGAGGCGCACATGGTTCCGGAGATGGTTCCGGCGATGGACCCCAT
ACGCCCATCGAGGAATCCGAAGGCACCACCACCAACGAAGTGGAGTCGCG
TGACAGCGGCAAGACCAGTGGGTCCAACCCACTGGAAGGCACCGCGACGT
GGATGCTCCTCACTCTAGTCACAATGCTCTTTAGTAGCTGTAGTTAAAAG
CTTTCTAGACCAT

BS02951.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
dally-RB 1881 CG4974-PB 1..1881 17..1897 9405 100 Plus
dally-RA 1881 CG4974-PA 1..1881 17..1897 9405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:56
Subject Length Description Subject Range Query Range Score Percent Strand
dally-RB 4483 CG4974-RB 729..2609 17..1897 9405 100 Plus
dally-RA 3444 CG4974-RA 729..2609 17..1897 9405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8886497..8886970 556..1029 2370 100 Plus
3L 28110227 3L 8828233..8828504 17..288 1360 100 Plus
3L 28110227 3L 8888652..8888860 1396..1604 1045 100 Plus
3L 28110227 3L 8887096..8887290 1029..1223 975 100 Plus
3L 28110227 3L 8887957..8888134 1218..1395 890 100 Plus
3L 28110227 3L 8889163..8889318 1742..1897 780 100 Plus
3L 28110227 3L 8877156..8877303 286..433 740 100 Plus
3L 28110227 3L 8888923..8889063 1603..1743 705 100 Plus
3L 28110227 3L 8886275..8886398 432..555 620 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:53:54 has no hits.

BS02951.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-25 16:09:56 Download gff for BS02951.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 728..2606 17..1895 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:37:49 Download gff for BS02951.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 729..2607 17..1895 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:55 Download gff for BS02951.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 729..2607 17..1895 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:55 Download gff for BS02951.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8887959..8888134 1220..1395 100 -> Plus
3L 8888652..8888859 1396..1603 100 -> Plus
3L 8888924..8889062 1604..1742 100 -> Plus
3L 8889164..8889316 1743..1895 100   Plus
3L 8828233..8828503 17..287 100 -> Plus
3L 8877158..8877301 288..431 100 -> Plus
3L 8886275..8886398 432..555 100 -> Plus
3L 8886497..8886970 556..1029 100 -> Plus
3L 8887097..8887286 1030..1219 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:37:49 Download gff for BS02951.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8882024..8882162 1604..1742 100 -> Plus
arm_3L 8882264..8882416 1743..1895 100   Plus
arm_3L 8881059..8881234 1220..1395 100 -> Plus
arm_3L 8881752..8881959 1396..1603 100 -> Plus
arm_3L 8821333..8821603 17..287 100 -> Plus
arm_3L 8870258..8870401 288..431 100 -> Plus
arm_3L 8879375..8879498 432..555 100 -> Plus
arm_3L 8879597..8880070 556..1029 100 -> Plus
arm_3L 8880197..8880386 1030..1219 100 -> Plus

BS02951.pep Sequence

Translation from 16 to 1896

> BS02951.pep
MAARSVRLAQLLLFTLLCGFVGLSAAKHLDLDGIHHHQHHLHSATTHHRR
RLQRDSRAKDAVGGSTHQCDAVKSYFESIDIKSSGTYSEKGAICGGNCCN
NATELELRDKAAGMFEQLLHHHTSSLRGVLETNAKQFQSHVLELAQISEN
MTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTNSNGQLGRRGI
GSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFD
EMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTD
TCKLHLLKMHYCPNCNGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDS
PWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYFSEAIMAAMHNGPELEK
KVKKTCGTPSLTPYSSGEPDARPPPHKNNVKWATDPDPGMVLFLSTIDKS
KEFYTTIVDNFCDEQQHSRDDHSCWSGDRFGDYTQLLINPGTDSQRYNPE
VPFNAKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSG
GGEGQIGDDEEEYGGAHGSGDGSGDGPHTPIEESEGTTTNEVESRDSGKT
SGSNPLEGTATWMLLTLVTMLFSSCS*

BS02951.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:04:19
Subject Length Description Subject Range Query Range Score Percent Strand
dally-PB 626 CG4974-PB 1..626 1..626 3342 100 Plus
dally-PA 626 CG4974-PA 1..626 1..626 3342 100 Plus
dlp-PC 764 CG32146-PC 116..397 96..411 256 24.7 Plus
dlp-PA 765 CG32146-PA 116..397 96..411 256 24.7 Plus