Clone Sequence Records
BS03124.3prime Sequence
396 bp (395 high quality bases) assembled on 2005-11-30
> BS03124.3prime
ATGGTCTAGAAAGCTTTCAGTGTCCCTCGTGCTTTGCTCTGTAGATGCCT
TGGGGATCGTACTTGTTCAGGAGGAGCTTCCATTCGCCGGCTTTGTTGGC
GCGAAGGTAGTTGATTACCTTTTGTGAGTTTTTGCGTTGGACTTCCGTGC
ACTTTGAGCAGTCGGAATGAAGGGCGTCGGGTAAAAGGCGCTTAAGTTCA
CGACCCTCTGCTGTGCATGGGCCCTTGTCCATCAGGCACTTGAGATAATT
ACCCAACACTCGGTTGTTGCCCAGAACTTCATCCACGTTGACACTGTCGT
ACTTGTTGGTGTAGGTTTTTTCAGGAGCAGCTGCCGCAAGACCGACACAA
ACACAGAACACTAGAGCTAGCGAGGCTTTCATGTCGACTGATAACT
BS03124.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:28:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9358-PA | 366 | Phk-3-RA | 1..366 | 382..17 | 1830 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:07:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-RC | 718 | CG9358-RC | 257..629 | 382..10 | 1835 | 99.5 | Minus |
Phk-3-RB | 635 | CG9358-RB | 174..546 | 382..10 | 1835 | 99.5 | Minus |
Phk-3-RA | 546 | CG9358-RA | 85..457 | 382..10 | 1835 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:07:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24970932..24971304 | 10..382 | 1835 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:07:35 has no hits.
BS03124.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:20:52 Download gff for
BS03124.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-PA | 1..366 | 17..382 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:33:54 Download gff for
BS03124.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9358-PA | 1..366 | 17..382 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 14:01:41 Download gff for
BS03124.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..466 | 2..382 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:01:06 Download gff for
BS03124.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..466 | 2..382 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:01:06 Download gff for
BS03124.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24970923..24971304 | 2..382 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 14:01:41 Download gff for
BS03124.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20858446..20858827 | 2..382 | 98 | <- | Plus |
BS03124.5prime Sequence
396 bp (395 high quality bases) assembled on 2005-11-30
> BS03124.5prime
GAAGTTATCAGTCGACATGAAAGCCTCGCTAGCTCTAGTGTTCTGTGTTT
GTGTCGGTCTTGCGGCAGCTGCTCCTGAAAAAACCTACACCAACAAGTAC
GACAGTGTCAACGTGGATGAAGTTCTGGGCAACAACCGAGTGTTGGGTAA
TTATCTCAAGTGCCTGATGGACAAGGGCCCATGCACAGCAGAGGGTCGTG
AACTTAAGCGCCTTTTACCCGACGCCCTTCATTCCGACTGCTCAAAGTGC
ACGGAAGTCCAACGCAAAAACTCACAAAAGGTAATCAACTACCTTCGCGC
CAACAAAGCCGGCGAATGGAAGCTCCTCCTGAACAAGTACGATCCCCAAG
GCATCTACAGAGCAAAGCACGAGGGACACTGAAAGCTTTCTAGACC
BS03124.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:28:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9358-PA | 366 | Phk-3-RA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:55:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-RC | 718 | CG9358-RC | 257..629 | 17..389 | 1835 | 99.5 | Plus |
Phk-3-RB | 635 | CG9358-RB | 174..546 | 17..389 | 1835 | 99.5 | Plus |
Phk-3-RA | 546 | CG9358-RA | 85..457 | 17..389 | 1835 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:54:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24970932..24971304 | 389..17 | 1835 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:55:02 has no hits.
BS03124.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:20:53 Download gff for
BS03124.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-PA | 1..366 | 17..382 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:33:56 Download gff for
BS03124.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9358-PA | 1..366 | 17..382 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:56:52 Download gff for
BS03124.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..465 | 17..396 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:08:30 Download gff for
BS03124.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..465 | 17..396 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:08:30 Download gff for
BS03124.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24970924..24971304 | 17..396 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:56:52 Download gff for
BS03124.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20858447..20858827 | 17..396 | 98 | <- | Minus |
BS03124.complete Sequence
398 bp (398 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ638769
> BS03124.complete
GAAGTTATCAGTCGACATGAAAGCCTCGCTAGCTCTAGTGTTCTGTGTTT
GTGTCGGTCTTGCGGCAGCTGCTCCTGAAAAAACCTACACCAACAAGTAC
GACAGTGTCAACGTGGATGAAGTTCTGGGCAACAACCGAGTGTTGGGTAA
TTATCTCAAGTGCCTGATGGACAAGGGCCCATGCACAGCAGAGGGTCGTG
AACTTAAGCGCCTTTTACCCGACGCCCTTCATTCCGACTGCTCAAAGTGC
ACGGAAGTCCAACGCAAAAACTCACAAAAGGTAATCAACTACCTTCGCGC
CAACAAAGCCGGCGAATGGAAGCTCCTCCTGAACAAGTACGATCCCCAAG
GCATCTACAGAGCAAAGCACGAGGGACACTGAAAGCTTTCTAGACCAT
BS03124.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:54:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-RC | 366 | CG9358-PC | 1..366 | 17..382 | 1830 | 100 | Plus |
Phk-3-RB | 366 | CG9358-PB | 1..366 | 17..382 | 1830 | 100 | Plus |
Phk-3-RA | 366 | CG9358-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-RC | 718 | CG9358-RC | 257..629 | 17..389 | 1835 | 99.5 | Plus |
Phk-3-RB | 635 | CG9358-RB | 174..546 | 17..389 | 1835 | 99.5 | Plus |
Phk-3-RA | 546 | CG9358-RA | 85..457 | 17..389 | 1835 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24970932..24971304 | 389..17 | 1835 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:54:03 has no hits.
BS03124.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:09 Download gff for
BS03124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 1..366 | 17..382 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:18:46 Download gff for
BS03124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 82..463 | 17..397 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:38 Download gff for
BS03124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..449 | 17..381 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:10 Download gff for
BS03124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 82..463 | 17..397 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:07 Download gff for
BS03124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..449 | 17..381 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:07 Download gff for
BS03124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24970940..24971304 | 17..381 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:38 Download gff for
BS03124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20858463..20858827 | 17..381 | 100 | | Minus |
BS03124.pep Sequence
Translation from 16 to 381
> BS03124.pep
MKASLALVFCVCVGLAAAAPEKTYTNKYDSVNVDEVLGNNRVLGNYLKCL
MDKGPCTAEGRELKRLLPDALHSDCSKCTEVQRKNSQKVINYLRANKAGE
WKLLLNKYDPQGIYRAKHEGH*
BS03124.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:42:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-PC | 121 | CG9358-PC | 1..121 | 1..121 | 646 | 100 | Plus |
Phk-3-PB | 121 | CG9358-PB | 1..121 | 1..121 | 646 | 100 | Plus |
Phk-3-PA | 121 | CG9358-PA | 1..121 | 1..121 | 646 | 100 | Plus |
PebIII-PC | 126 | CG11390-PC | 1..111 | 1..114 | 334 | 57 | Plus |
PebIII-PB | 126 | CG11390-PB | 1..111 | 1..114 | 334 | 57 | Plus |