Clone Sequence Records
BS03216.3prime Sequence
788 bp (787 high quality bases) assembled on 2005-11-30
> BS03216.3prime
ATGGTCTAGAAAGCTTCTAGAGCTGCACCTGGAATGACTGCGCCGGCGCC
TTGGGCGGTGAGATGAACGGATTGGTGCTGTGCCTGGCCAGAGGCGAGCG
CGCAGTGCTCGGGATTGGCAAGTCTGGCGACAATTGCTTGGCCGCTGCCA
CATTGGCCACCCACTCGGCGTCAAATGGATCGTCTGGGCCACCGCCTCCA
ACTGCAGCGCCAGTGCCACTGGCCAGTGTCTGAGCTCGGCCAACGTTGGC
CAAATAAGTGGGCCGCTTCGGTGCTGCCGGAGACGTACTGCGCACCACAT
GACCCAGCCATTGCTCGGCATTGGGCAGTTCCGTCGAGGTTTCGATGCTC
TGCTCCGATCGCGAGGGCGACTGCGAATGGAGCGTCTGATATGTGGGCGT
GGTGCTGGCCACTCGAGGCGTCACTTGTGCCGTCGGCGGGGCATATGAGT
GTACATGTTGCACCTGCTTCTCGGCGGCAATGATGTTCTGATTAATGCTG
CGATTGTTGTTGAAGTTTAGATCCTCGCCGGCGGCTAATAGGGCGTCTGT
CTGGGTCAAGAGCGAGAGACCCTGGCTGAGCTCCTGACACAGTTGGCTCA
CAGAATCGGCGGCTACAGCGGCAGCTGACAACGGATCCGCTCCAGCAGAC
TTGGCCGGCGAGACCTCGGCAATGGGAGAAACACTTCGCAGTGGCGTCTG
CATTGGATTGCCAGCGGCGGCGGTCAGGAAGGCCCTCTGACGATCGGCAT
TGGACGGAAGATCGTTGATGCGCAGTGACATCTGGCGC
BS03216.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:28:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3779-PA | 1671 | numb-RA | 900..1671 | 788..17 | 3860 | 100 | Minus |
| CG3779-PB | 1548 | numb-RB | 777..1548 | 788..17 | 3860 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RA | 3309 | CG3779-RA | 1693..2464 | 788..17 | 3860 | 100 | Minus |
| numb-RD | 4395 | CG3779-RD | 1718..2489 | 788..17 | 3860 | 100 | Minus |
| numb-RB | 2956 | CG3779-RB | 1340..2111 | 788..17 | 3860 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:26:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9461507..9462278 | 788..17 | 3860 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 09:26:53 has no hits.
BS03216.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:21:32 Download gff for
BS03216.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-PB | 777..1548 | 17..788 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:34:48 Download gff for
BS03216.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3779-PB | 777..1548 | 17..788 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 15:54:46 Download gff for
BS03216.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1693..2466 | 13..788 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:16:24 Download gff for
BS03216.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1693..2466 | 13..788 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:16:24 Download gff for
BS03216.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9461507..9462280 | 13..788 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 15:54:46 Download gff for
BS03216.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9461507..9462280 | 13..788 | 99 | | Minus |
BS03216.5prime Sequence
776 bp (709 high quality bases) assembled on 2005-11-29
> BS03216.5prime
GAAGTTATCAGTCGACATGCAGGTCTGCGAGGAGGCACTCAAGGTCTTGA
GGCAATCCCGTCGTCGTCCTGTCCGCGGATTACTTCATGTCAGCGGAGAC
GGCCTGCGAGTGGTGGACGACGAGACCAAGGGCCTGATAGTGGACCAGAC
CATCGAGAAGGTCAGCTTCTGTGCACCGGATCGCAATCACGAACGCGGCT
TCAGCTACATATGCCGGGATGGAACCACTCGTCGCTGGATGTGTCACGGC
TTCCTGGCGTGCAAGGACTCCGGCGAGCGATTGTCCCATGCCGTTGGCTG
TGCTTTTGCCGTTTGTCTGGAGCGAAAGCAGCGACGCGACAAGGAGTGCG
GCGTGACAATGACCTTCGACACGAAGAACTCGACCTTCACGCGGACCGGA
TCCTTCCGTCAGCAGACGTTGACGGAGCGTCTGGCAATGGCCACAGTGGG
CACAAATGAGCGGAGCGTAGATGGGCCGGGATCAGCAATGCCGGGTCCTC
CGGCGGCCACCGTCAAGCCTTTCAATCCCTTCGCCATCGAACGGCCCCAT
GCCACGCCCAACATGCTGGAGCGTCAGAGTTCGTTCCGTTTGAGCACGAT
TGGCAGTCAGTCGCCGTTCAAGCGCCAGATGTCACTGCGCATCAACGATC
TTCCGTCCAATGCCGATCGTCAGAGGGCCTTCCTGACCGCCGCCGCTGGC
AATCCAATGCAGACGCCACTGCGAAGTGTTTCTCCCATTGCCGAGGTCTC
GCCGGCCAAGTCTGCTGGAGCGGATC
BS03216.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:28:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3779-PA | 1671 | numb-RA | 294..1054 | 16..776 | 3805 | 100 | Plus |
| CG3779-PB | 1548 | numb-RB | 171..931 | 16..776 | 3805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:18:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 1112..1872 | 16..776 | 3805 | 100 | Plus |
| numb-RB | 2956 | CG3779-RB | 734..1494 | 16..776 | 3805 | 100 | Plus |
| numb-RA | 3309 | CG3779-RA | 1087..1847 | 16..776 | 3805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 12:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9461661 | 52..776 | 3625 | 100 | Plus |
| 2L | 23513712 | 2L | 9460717..9460753 | 16..52 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 12:18:35 has no hits.
BS03216.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:21:33 Download gff for
BS03216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-PB | 168..931 | 13..776 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:34:49 Download gff for
BS03216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3779-PB | 168..931 | 13..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 13:58:13 Download gff for
BS03216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1084..1847 | 13..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:39:33 Download gff for
BS03216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1084..1847 | 13..776 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:39:33 Download gff for
BS03216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460714..9460753 | 13..52 | 97 | -> | Plus |
| 2L | 9460938..9461661 | 53..776 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 13:58:13 Download gff for
BS03216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460714..9460753 | 13..52 | 97 | -> | Plus |
| arm_2L | 9460938..9461661 | 53..776 | 100 | | Plus |
BS03216.complete Sequence
1409 bp (1409 high quality bases) assembled on 2005-06-23
> BS03216.complete
GAAGTTATCAGTCGACATGCAGGTCTGCGAGGAGGCACTCAAGGTCTTGA
GGCAATCCCGTCGTCGTCCTGTCCGCGGATTACTTCATGTCAGCGGAGAC
GGCCTGCGAGTGGTGGACGACGAGACCAAGGGCCTGATAGTGGACCAGAC
CATCGAGAAGGTCAGCTTCTGTGCACCGGATCGCAATCACGAACGCGGCT
TCAGCTACATATGCCGGGATGGAACCACTCGTCGCTGGATGTGTCACGGC
TTCCTGGCGTGCAAGGACTCCGGCGAGCGATTGTCCCATGCCGTTGGCTG
TGCTTTTGCCGTTTGTCTGGAGCGAAAGCAGCGACGCGACAAGGAGTGCG
GCGTGACAATGACCTTCGACACGAAGAACTCGACCTTCACGCGGACCGGA
TCCTTCCGTCAGCAGACGTTGACGGAGCGTCTGGCAATGGCCACAGTGGG
CACAAATGAGCGGAGCGTAGATGGGCCGGGATCAGCAATGCCGGGTCCTC
CGGCGGCCACCGTCAAGCCTTTCAATCCCTTCGCCATCGAACGGCCCCAT
GCCACGCCCAACATGCTGGAGCGTCAGAGTTCGTTCCGTTTGAGCACGAT
TGGCAGTCAGTCGCCGTTCAAGCGCCAGATGTCACTGCGCATCAACGATC
TTCCGTCCAATGCCGATCGTCAGAGGGCCTTCCTGACCGCCGCCGCTGGC
AATCCAATGCAGACGCCACTGCGAAGTGTTTCTCCCATTGCCGAGGTCTC
GCCGGCCAAGTCTGCTGGAGCGGATCCGTTGTCAGCTGCCGCTGTAGCCG
CCGATTCTGTGAGCCAACTGTGTCAGGAGCTCAGCCAGGGTCTCTCGCTC
TTGACCCAGACAGACGCCCTATTAGCCGCCGGCGAGGATCTAAACTTCAA
CAACAATCGCAGCATTAATCAGAACATCATTGCCGCCGAGAAGCAGGTGC
AACATGTACACTCATATGCCCCGCCGACGGCACAAGTGACGCCTCGAGTG
GCCAGCACCACGCCCACATATCAGACGCTCCATTCGCAGTCGCCCTCGCG
ATCGGAGCAGAGCATCGAAACCTCGACGGAACTGCCCAATGCCGAGCAAT
GGCTGGGTCATGTGGTGCGCAGTACGTCTCCGGCAGCACCGAAGCGGCCC
ACTTATTTGGCCAACGTTGGCCGAGCTCAGACACTGGCCAGTGGCACTGG
CGCTGCAGTTGGAGGCGGTGGCCCAGACGATCCATTTGACGCCGAGTGGG
TGGCCAATGTGGCAGCGGCCAAGCAATTGTCGCCAGACTTGCCAATCCCG
AGCACTGCGCGCTCGCCTCTGGCCAGGCACAGCACCAATCCGTTCATCTC
ACCGCCCAAGGCGCCGGCGCAGTCATTCCAGGTGCAGCTCTAGAAGCTTT
CTAGACCAT
BS03216.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:13:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 1671 | CG3779-PD | 294..1671 | 16..1393 | 6890 | 100 | Plus |
| numb-RB | 1548 | CG3779-PB | 171..1548 | 16..1393 | 6890 | 100 | Plus |
| numb-RA | 1671 | CG3779-PA | 294..1671 | 16..1393 | 6890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:13:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 1112..2489 | 16..1393 | 6890 | 100 | Plus |
| numb-RB | 2956 | CG3779-RB | 734..2111 | 16..1393 | 6890 | 100 | Plus |
| numb-RA | 3309 | CG3779-RA | 1087..2464 | 16..1393 | 6890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9462278 | 52..1393 | 6710 | 100 | Plus |
| 2L | 23513712 | 2L | 9460717..9460753 | 16..52 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:13:06 has no hits.
BS03216.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:33:56 Download gff for
BS03216.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RB | 168..1548 | 13..1393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:18:26 Download gff for
BS03216.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RB | 687..2069 | 13..1397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:42:42 Download gff for
BS03216.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1088..2464 | 17..1393 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:33:56 Download gff for
BS03216.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RB | 687..2069 | 13..1397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:47:52 Download gff for
BS03216.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1088..2464 | 17..1393 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:47:52 Download gff for
BS03216.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460718..9460753 | 17..52 | 100 | -> | Plus |
| 2L | 9460938..9462278 | 53..1393 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:42:42 Download gff for
BS03216.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460718..9460753 | 17..52 | 100 | -> | Plus |
| arm_2L | 9460938..9462278 | 53..1393 | 100 | | Plus |
BS03216.pep Sequence
Translation from 16 to 1392
> BS03216.pep
MQVCEEALKVLRQSRRRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEKVS
FCAPDRNHERGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAFAVC
LERKQRRDKECGVTMTFDTKNSTFTRTGSFRQQTLTERLAMATVGTNERS
VDGPGSAMPGPPAATVKPFNPFAIERPHATPNMLERQSSFRLSTIGSQSP
FKRQMSLRINDLPSNADRQRAFLTAAAGNPMQTPLRSVSPIAEVSPAKSA
GADPLSAAAVAADSVSQLCQELSQGLSLLTQTDALLAAGEDLNFNNNRSI
NQNIIAAEKQVQHVHSYAPPTAQVTPRVASTTPTYQTLHSQSPSRSEQSI
ETSTELPNAEQWLGHVVRSTSPAAPKRPTYLANVGRAQTLASGTGAAVGG
GGPDDPFDAEWVANVAAAKQLSPDLPIPSTARSPLARHSTNPFISPPKAP
AQSFQVQL*
BS03216.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:46:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-PD | 556 | CG3779-PD | 99..556 | 1..458 | 2363 | 100 | Plus |
| numb-PB | 515 | CG3779-PB | 58..515 | 1..458 | 2363 | 100 | Plus |
| numb-PA | 556 | CG3779-PA | 99..556 | 1..458 | 2363 | 100 | Plus |
