Clone Sequence Records
BS03269.5prime Sequence
839 bp (754 high quality bases) assembled on 2005-11-29
> BS03269.5prime
GAAGTTATCAGTCGACATGGCGACGAGAGGCAGTGGAACCCGTGTGCAAT
CGCAGCCAAAGATTTTCCCATCGCTGCTTTCCAAGCTGCACGGCGCTATC
TCGGAAGCCTGCGTCTCGCAGCGTCTGTCCACCGACAAGAAGACGCTGGA
GAAGACCTGGAAGTTGATGGACAAGGTGGTCAAACTGTGCCAGCAGCCGA
AGATGAATCTTAAGAATAGTCCACCGTTTATTTTGGACATCCTGCCGGAT
ACGTACCAGCGCCTGAGATTGATCTACTCAAAGAACGAGGACCAGATGCA
CCTGCTCCATGCCAACGAGCACTTCAACGTGTTCATCAACAACCTGATGC
GAAAGTGCAAGCAGGCCATCAAGTTGTTCAAGGAGGGCAAGGAGAAGATG
TTCGACGAGAACTCCCACTACCGCCGCAATCTCACCAAGCTCAGCCTGGT
CTTCTCCCACATGCTCAGCGAACTGAAGGCCATATTCCCCAACGGTGTCT
TTGCCGGGGATCAATTTCGGATCACCAAAGCGGATGCGGCTGACTTTTGG
AAGAGCAACTTCGGTAACAGCACATTGGTTCCCTGGAAAATCTTCCGGCA
GGAGCTTAACAAAGTACATCCCATAATCTCCGGCCTGGAGGCCATGGCCC
TAAAGACCACTATCGATCTTACCTGCAACGACTTCATTTCCAACTTCGAG
TTCGACGTCTTCACACGCCTCTTCCAGCCTTGGGTGACCCTGCTACGCAA
CTGGCAGATTCTGGCCGTCACACATCGGGGCTACGTGGCGTTTCTCACAT
ACGACGAGGTGAAGGCTCGCCTACAGCGCTACATCCTCA
BS03269.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:29:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7037-PA | 1347 | Cbl-RA | 1..823 | 17..839 | 4090 | 99.8 | Plus |
CG7037-PB | 2637 | Cbl-RB | 1..823 | 17..839 | 4090 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:50:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-RB | 4902 | CG7037-RB | 356..1178 | 17..839 | 4100 | 99.9 | Plus |
Cbl-RA | 2948 | CG7037-RA | 356..1178 | 17..839 | 4100 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:49:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8425309..8425862 | 17..570 | 2770 | 100 | Plus |
3L | 28110227 | 3L | 8426403..8426674 | 568..839 | 1345 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:49:56 has no hits.
BS03269.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:22:49 Download gff for
BS03269.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-PA | 1..822 | 17..838 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:36:30 Download gff for
BS03269.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7037-PB | 1..822 | 17..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:11:10 Download gff for
BS03269.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 349..1177 | 10..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:00:16 Download gff for
BS03269.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 349..1177 | 10..838 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:00:16 Download gff for
BS03269.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8425302..8425862 | 10..570 | 99 | -> | Plus |
3L | 8426406..8426673 | 571..838 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:11:10 Download gff for
BS03269.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8418402..8418962 | 10..570 | 99 | -> | Plus |
arm_3L | 8419506..8419773 | 571..838 | 99 | | Plus |
BS03269.3prime Sequence
906 bp (783 high quality bases) assembled on 2005-11-30
> BS03269.3prime
ATGGTCTAGAAAGCTTCTATACCTCAGTGTCGTCTTCTTCCTGCTGCTGC
TGTCGCCCATTGGTGACGTTCCGGTTGTGTTGCTTGCGCGGATCGAAAGC
GTCCACAACGATTTGTTCGGTGCCCTTGATTTCGGCCCGACAGAAGGGGC
AGCCCTGTCCCTCGGAATCCACTTGCCAGGAGGTAAGGCAGGGAGTGCAC
AACAAGTGGCCACAGGGCTCGATGCGGATATCTTTGTCGTTCTCCGCACA
GATTTTGCACAGCTGAAAGGTGCTGCCCATTTCACAGTATAGTTCGTATT
GCTCTTGGGTAACGGTTATGTGGTCCTCTGTGGGACTTTGAACGGCAGAC
GACAGATCCGGATTGTACGCTTGGCCATCTGGGTACAAGTAGAAGCCCTC
TCGATGGCCATCGAGCAGCGCCTGGCACAGCGACTTGTTCTGAGGGATTG
TCTGCAGAATCTCTCCCTCGGCAGTTACGTAGCCGATGGCCCATTGGCCC
AATCGCGTGCAGGAGAGCCGGAAAACGTAGCTGCCCGCCTTGAGGATGTA
GCGCTGTAGGCGAGCCTTCACCTCGTCGTATGTGAGAAACGCCACGTAGC
CCGGATGTGTGACGGCCAGAATCTGCCAGTTGCGTAGCAGGGTCACCCAA
GGCTGGAAGAGGCGTGTGAAGACGTCGAACTCGAAGTTGGAAATGAAGTC
GTTGCAGGTAAGATCGATAGTGGTCTTTAGGGCCATGGCCTCCAGGCCGG
AGATTATGGGATGTACTTTGTTAAGCTCCTGCCGGAAGATTTTCCAGGGA
ACCAATGTGCTGTTACCGAAGTTGCTCTTCCAAAAGTCAGCCGCATCCGC
TTTGGTGATCCGAAATTGAATCCCGGCAAAGACACCGTTTGGGGAATATG
GCCTTC
BS03269.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:29:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7037-PA | 1347 | Cbl-RA | 475..1347 | 889..17 | 4315 | 99.7 | Minus |
CG7037-PB | 2637 | Cbl-RB | 475..1342 | 889..22 | 4290 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 08:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-RA | 2948 | CG7037-RA | 814..1702 | 906..17 | 4395 | 99.7 | Minus |
Cbl-RB | 4902 | CG7037-RB | 814..1697 | 906..22 | 4370 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 08:46:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8426403..8426813 | 812..402 | 2055 | 100 | Minus |
3L | 28110227 | 3L | 8427269..8427409 | 157..17 | 705 | 100 | Minus |
3L | 28110227 | 3L | 8426901..8427027 | 402..276 | 635 | 100 | Minus |
3L | 28110227 | 3L | 8427091..8427214 | 277..154 | 620 | 100 | Minus |
3L | 28110227 | 3L | 8425767..8425862 | 906..810 | 405 | 96.9 | Minus |
Blast to na_te.dros performed on 2015-02-01 08:46:16 has no hits.
BS03269.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:22:48 Download gff for
BS03269.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-PA | 459..1347 | 17..906 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:36:29 Download gff for
BS03269.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7037-PA | 459..1347 | 17..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:10:35 Download gff for
BS03269.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 814..1705 | 10..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:51:17 Download gff for
BS03269.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 814..1705 | 10..906 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 11:51:17 Download gff for
BS03269.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8425767..8425862 | 810..906 | 96 | -> | Minus |
3L | 8426406..8426813 | 402..809 | 100 | -> | Minus |
3L | 8426902..8427026 | 277..401 | 100 | -> | Minus |
3L | 8427092..8427213 | 155..276 | 100 | -> | Minus |
3L | 8427272..8427412 | 10..154 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:10:35 Download gff for
BS03269.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8418867..8418962 | 810..906 | 96 | -> | Minus |
arm_3L | 8419506..8419913 | 402..809 | 100 | -> | Minus |
arm_3L | 8420002..8420126 | 277..401 | 100 | -> | Minus |
arm_3L | 8420192..8420313 | 155..276 | 100 | -> | Minus |
arm_3L | 8420372..8420512 | 10..154 | 97 | | Minus |
BS03269.complete Sequence
1379 bp (1379 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634710
> BS03269.complete
GAAGTTATCAGTCGACATGGCGACGAGAGGCAGTGGAACCCGTGTGCAAT
CGCAGCCAAAGATTTTCCCATCGCTGCTTTCCAAGCTGCACGGCGCTATC
TCGGAAGCCTGCGTCTCGCAGCGTCTGTCCACCGACAAGAAGACGCTGGA
GAAGACCTGGAAGTTGATGGACAAGGTGGTCAAACTGTGCCAGCAGCCGA
AGATGAATCTTAAGAATAGTCCACCGTTTATTTTGGACATCCTGCCGGAT
ACGTACCAGCGCCTGAGATTGATCTACTCAAAGAACGAGGACCAGATGCA
CCTGCTCCATGCCAACGAGCACTTCAACGTGTTCATCAACAACCTGATGC
GAAAGTGCAAGCAGGCCATCAAGTTGTTCAAGGAGGGCAAGGAGAAGATG
TTCGACGAGAACTCCCACTACCGCCGCAATCTCACCAAGCTCAGCCTGGT
CTTCTCCCACATGCTCAGCGAACTGAAGGCCATATTCCCCAACGGTGTCT
TTGCCGGGGATCAATTTCGGATCACCAAAGCGGATGCGGCTGACTTTTGG
AAGAGCAACTTCGGTAACAGCACATTGGTTCCCTGGAAAATCTTCCGGCA
GGAGCTTAACAAAGTACATCCCATAATCTCCGGCCTGGAGGCCATGGCCC
TAAAGACCACTATCGATCTTACCTGCAACGACTTCATTTCCAACTTCGAG
TTCGACGTCTTCACACGCCTCTTCCAGCCTTGGGTGACCCTGCTACGCAA
CTGGCAGATTCTGGCCGTCACACATCCGGGCTACGTGGCGTTTCTCACAT
ACGACGAGGTGAAGGCTCGCCTACAGCGCTACATCCTCAAGGCGGGCAGC
TACGTTTTCCGGCTCTCCTGCACGCGATTGGGCCAATGGGCCATCGGCTA
CGTAACTGCCGAGGGAGAGATTCTGCAGACAATCCCTCAGAACAAGTCGC
TGTGCCAGGCGCTGCTCGATGGCCATCGAGAGGGCTTCTACTTGTACCCA
GATGGCCAAGCGTACAATCCGGATCTGTCGTCTGCCGTTCAAAGTCCCAC
AGAGGACCACATAACCGTTACCCAAGAGCAATACGAACTATACTGTGAAA
TGGGCAGCACCTTTCAGCTGTGCAAAATCTGTGCGGAGAACGACAAAGAT
ATCCGCATCGAGCCCTGTGGCCACTTGTTGTGCACTCCCTGCCTTACCTC
CTGGCAAGTGGATTCCGAGGGACAGGGCTGCCCCTTCTGTCGGGCCGAAA
TCAAGGGCACCGAACAAATCGTTGTGGACGCTTTCGATCCGCGCAAGCAA
CACAACCGGAACGTCACCAATGGGCGACAGCAGCAGCAGGAAGAAGACGA
CACTGAGGTATAGAAGCTTTCTAGACCAT
BS03269.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:48:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-RA | 1347 | CG7037-PA | 1..1347 | 17..1363 | 6735 | 100 | Plus |
Cbl-RB | 2637 | CG7037-PB | 1..1342 | 17..1358 | 6710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:48:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-RA | 2948 | CG7037-RA | 356..1702 | 17..1363 | 6735 | 100 | Plus |
Cbl-RB | 4902 | CG7037-RB | 356..1697 | 17..1358 | 6710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:48:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8425309..8425862 | 17..570 | 2770 | 100 | Plus |
3L | 28110227 | 3L | 8426403..8426813 | 568..978 | 2055 | 100 | Plus |
3L | 28110227 | 3L | 8427269..8427409 | 1223..1363 | 705 | 100 | Plus |
3L | 28110227 | 3L | 8426901..8427027 | 978..1104 | 635 | 100 | Plus |
3L | 28110227 | 3L | 8427091..8427214 | 1103..1226 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:48:17 has no hits.
BS03269.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:00 Download gff for
BS03269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 1..1347 | 17..1363 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:18:33 Download gff for
BS03269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 358..1714 | 10..1370 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:42:22 Download gff for
BS03269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 356..1702 | 17..1363 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:00 Download gff for
BS03269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 358..1714 | 10..1370 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:31:14 Download gff for
BS03269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 356..1702 | 17..1363 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:31:14 Download gff for
BS03269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8425309..8425862 | 17..570 | 100 | -> | Plus |
3L | 8426406..8426813 | 571..978 | 100 | -> | Plus |
3L | 8426902..8427026 | 979..1103 | 100 | -> | Plus |
3L | 8427092..8427213 | 1104..1225 | 100 | -> | Plus |
3L | 8427272..8427409 | 1226..1363 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:42:22 Download gff for
BS03269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8418409..8418962 | 17..570 | 100 | -> | Plus |
arm_3L | 8419506..8419913 | 571..978 | 100 | -> | Plus |
arm_3L | 8420002..8420126 | 979..1103 | 100 | -> | Plus |
arm_3L | 8420192..8420313 | 1104..1225 | 100 | -> | Plus |
arm_3L | 8420372..8420509 | 1226..1363 | 100 | | Plus |
BS03269.pep Sequence
Translation from 16 to 1362
> BS03269.pep
MATRGSGTRVQSQPKIFPSLLSKLHGAISEACVSQRLSTDKKTLEKTWKL
MDKVVKLCQQPKMNLKNSPPFILDILPDTYQRLRLIYSKNEDQMHLLHAN
EHFNVFINNLMRKCKQAIKLFKEGKEKMFDENSHYRRNLTKLSLVFSHML
SELKAIFPNGVFAGDQFRITKADAADFWKSNFGNSTLVPWKIFRQELNKV
HPIISGLEAMALKTTIDLTCNDFISNFEFDVFTRLFQPWVTLLRNWQILA
VTHPGYVAFLTYDEVKARLQRYILKAGSYVFRLSCTRLGQWAIGYVTAEG
EILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHIT
VTQEQYELYCEMGSTFQLCKICAENDKDIRIEPCGHLLCTPCLTSWQVDS
EGQGCPFCRAEIKGTEQIVVDAFDPRKQHNRNVTNGRQQQQEEDDTEV*
BS03269.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:40:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-PA | 448 | CG7037-PA | 1..448 | 1..448 | 2386 | 100 | Plus |
Cbl-PB | 878 | CG7037-PB | 1..447 | 1..447 | 2382 | 100 | Plus |