Clone Sequence Records
BS03614.3prime Sequence
669 bp (668 high quality bases) assembled on 2005-12-01
> BS03614.3prime
ATGGTCTAGAAAGCTTTTATGCCGGCAGCTGGAGCTTCTTGCCCTTAAGA
ACTTTGGTAATGTATAAGTAGAAGAAGTCGCAGTACAAGACGGTCTGGAC
AACTCCGGCGAAGATCGCGATAAGGTCGTAGTGCGACTCGACCATGTACC
GGTAGACCCAGTTGAGCAAGTAGAGTGCACGGTACGATCCCAGGGCGAAG
AGGTAGTGGCTGGTGATGGACTCGGCCTCGCCGGTTCTGCTCACTAGGAA
CAGCTGCGGCAGAATGGCCACCGATTCCAAATAGATCGAGAATGTCCACA
GCACTTCCATCACGGTAAACTCATGATTGATCACCAGCGAGAGCAGGGCG
CACGGCACCAGCAGGAATTCGATGCGGAACGAATCGTGATTGTGGTCATA
GGTGGCCTTAAACTTCACGTACATCAAATACACGGTGGCACCGGACGTGG
CCAGGAACAACACCTTCATCACCGAGTTGTACAGGCTCACGTAGGTGGTG
AACAGATCCAGGTAGCGCGTCAGATAGACCACGGCGAACAGGATCTGCGA
CTTGCCCGATATTCCGGCGCACGAGCGGGTCTTCCATATCTTCAGCAGCA
GTATTATGATGGCAAACACATGCGACAGATCCCCAGCAAAGCGAAAGATA
TTCATGTCGACTGATAACT
BS03614.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:33:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5183-PB | 639 | KdelR-RB | 1..639 | 655..17 | 3195 | 100 | Minus |
CG5183-PC | 639 | KdelR-RC | 1..639 | 655..17 | 3195 | 100 | Minus |
CG5183-PA | 639 | KdelR-RA | 1..639 | 655..17 | 3195 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:58:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
KdelR-RC | 1679 | CG5183-RC | 218..856 | 655..17 | 3195 | 100 | Minus |
KdelR-RB | 1273 | CG5183-RB | 285..923 | 655..17 | 3195 | 100 | Minus |
KdelR-RA | 1201 | CG5183-RA | 213..851 | 655..17 | 3195 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:58:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10427171..10427809 | 655..17 | 3195 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:58:09 has no hits.
BS03614.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:28:19 Download gff for
BS03614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-PC | 1..639 | 17..655 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:43:34 Download gff for
BS03614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5183-PA | 1..639 | 17..655 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:10:37 Download gff for
BS03614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RB | 274..925 | 13..665 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:32:45 Download gff for
BS03614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RA | 202..853 | 13..665 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:32:45 Download gff for
BS03614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10427160..10427811 | 13..665 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:10:37 Download gff for
BS03614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10427160..10427811 | 13..665 | 99 | | Minus |
BS03614.5prime Sequence
669 bp (668 high quality bases) assembled on 2005-11-29
> BS03614.5prime
GAAGTTATCAGTCGACATGAATATCTTTCGCTTTGCTGGGGATCTGTCGC
ATGTGTTTGCCATCATAATACTGCTGCTGAAGATATGGAAGACCCGCTCG
TGCGCCGGAATATCGGGCAAGTCGCAGATCCTGTTCGCCGTGGTCTATCT
GACGCGCTACCTGGATCTGTTCACCACCTACGTGAGCCTGTACAACTCGG
TGATGAAGGTGTTGTTCCTGGCCACGTCCGGTGCCACCGTGTATTTGATG
TACGTGAAGTTTAAGGCCACCTATGACCACAATCACGATTCGTTCCGCAT
CGAATTCCTGCTGGTGCCGTGCGCCCTGCTCTCGCTGGTGATCAATCATG
AGTTTACCGTGATGGAAGTGCTGTGGACATTCTCGATCTATTTGGAATCG
GTGGCCATTCTGCCGCAGCTGTTCCTAGTGAGCAGAACCGGCGAGGCCGA
GTCCATCACCAGCCACTACCTCTTCGCCCTGGGATCGTACCGTGCACTCT
ACTTGCTCAACTGGGTCTACCGGTACATGGTCGAGTCGCACTACGACCTT
ATCGCGATCTTCGCCGGAGTTGTCCAGACCGTCTTGTACTGCGACTTCTT
CTACTTATACATTACCAAAGTTCTTAAGGGCAAGAAGCTCCAGCTGCCGG
CATAAAAGCTTTCTAGACC
BS03614.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:33:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5183-PB | 639 | KdelR-RB | 1..639 | 17..655 | 3195 | 100 | Plus |
CG5183-PC | 639 | KdelR-RC | 1..639 | 17..655 | 3195 | 100 | Plus |
CG5183-PA | 639 | KdelR-RA | 1..639 | 17..655 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:35:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
KdelR-RC | 1679 | CG5183-RC | 218..856 | 17..655 | 3195 | 100 | Plus |
KdelR-RB | 1273 | CG5183-RB | 285..923 | 17..655 | 3195 | 100 | Plus |
KdelR-RA | 1201 | CG5183-RA | 213..851 | 17..655 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:35:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10427171..10427809 | 17..655 | 3195 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:35:38 has no hits.
BS03614.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:28:20 Download gff for
BS03614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-PC | 1..639 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:43:35 Download gff for
BS03614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5183-PA | 1..639 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:38:09 Download gff for
BS03614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RB | 274..925 | 7..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:07:55 Download gff for
BS03614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RA | 202..853 | 7..659 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:07:55 Download gff for
BS03614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10427160..10427811 | 7..659 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:38:09 Download gff for
BS03614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10427160..10427811 | 7..659 | 99 | | Plus |
BS03614.complete Sequence
671 bp (671 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ634723
> BS03614.complete
GAAGTTATCAGTCGACATGAATATCTTTCGCTTTGCTGGGGATCTGTCGC
ATGTGTTTGCCATCATAATACTGCTGCTGAAGATATGGAAGACCCGCTCG
TGCGCCGGAATATCGGGCAAGTCGCAGATCCTGTTCGCCGTGGTCTATCT
GACGCGCTACCTGGATCTGTTCACCACCTACGTGAGCCTGTACAACTCGG
TGATGAAGGTGTTGTTCCTGGCCACGTCCGGTGCCACCGTGTATTTGATG
TACGTGAAGTTTAAGGCCACCTATGACCACAATCACGATTCGTTCCGCAT
CGAATTCCTGCTGGTGCCGTGCGCCCTGCTCTCGCTGGTGATCAATCATG
AGTTTACCGTGATGGAAGTGCTGTGGACATTCTCGATCTATTTGGAATCG
GTGGCCATTCTGCCGCAGCTGTTCCTAGTGAGCAGAACCGGCGAGGCCGA
GTCCATCACCAGCCACTACCTCTTCGCCCTGGGATCGTACCGTGCACTCT
ACTTGCTCAACTGGGTCTACCGGTACATGGTCGAGTCGCACTACGACCTT
ATCGCGATCTTCGCCGGAGTTGTCCAGACCGTCTTGTACTGCGACTTCTT
CTACTTATACATTACCAAAGTTCTTAAGGGCAAGAAGCTCCAGCTGCCGG
CATAAAAGCTTTCTAGACCAT
BS03614.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:35:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
KdelR-RC | 639 | CG5183-PC | 1..639 | 17..655 | 3195 | 100 | Plus |
KdelR-RB | 639 | CG5183-PB | 1..639 | 17..655 | 3195 | 100 | Plus |
KdelR-RA | 639 | CG5183-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:35:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
KdelR-RC | 1679 | CG5183-RC | 218..856 | 17..655 | 3195 | 100 | Plus |
KdelR-RB | 1273 | CG5183-RB | 285..923 | 17..655 | 3195 | 100 | Plus |
KdelR-RA | 1201 | CG5183-RA | 213..851 | 17..655 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:35:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10427171..10427809 | 17..655 | 3195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:35:16 has no hits.
BS03614.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:58 Download gff for
BS03614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RA | 1..639 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:29:53 Download gff for
BS03614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RA | 222..873 | 7..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:21 Download gff for
BS03614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RB | 285..921 | 17..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:58 Download gff for
BS03614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RA | 222..873 | 7..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:11:32 Download gff for
BS03614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
KdelR-RA | 213..849 | 17..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:32 Download gff for
BS03614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10427171..10427807 | 17..653 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:21 Download gff for
BS03614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10427171..10427807 | 17..653 | 100 | | Plus |
BS03614.pep Sequence
Translation from 16 to 654
> BS03614.pep
MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLD
LFTTYVSLYNSVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLV
PCALLSLVINHEFTVMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSH
YLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGVVQTVLYCDFFYLYIT
KVLKGKKLQLPA*
BS03614.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:32:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
KdelR-PC | 212 | CG5183-PC | 1..212 | 1..212 | 1084 | 100 | Plus |
KdelR-PB | 212 | CG5183-PB | 1..212 | 1..212 | 1084 | 100 | Plus |
KdelR-PA | 212 | CG5183-PA | 1..212 | 1..212 | 1084 | 100 | Plus |