Clone Sequence Records
BS03616.3prime Sequence
597 bp (596 high quality bases) assembled on 2005-12-01
> BS03616.3prime
ATGGTCTAGAAAGCTTTTACGTAGCAACAGGAGCCGGAGCAGCTCCCTCC
GGTTCGGCAGCCTTTTCTCCGTTGCCGTTCTGCGCCTTGGCTGCCGGCAG
ATCCTTGACTCCGGTGGAACCGAATCCTGCCTCGCCGCGCTCGGTGTCCT
CCAGTTTGTCCACCATCACCAGTTGCGGATAGAAGATACGCTCGCAAATG
AACTGGGCGATGCGGTCGCCATGCTTCACCTCGAAATCAACATCTGAGTG
ATTGAACAGGACGACGCCGAGATTGCCGCGATAATCCTCGTCCACCACAC
CGGCGCCCACATCAATGAAGTTCTTCACCGCCAGCCCGGATCGTGGGGCT
ACGCGTCCGTAGGAGCCCTCCGGAACCTGCACTTGCAGATCGGTCTTGAC
AATGGCCTTTCCGCGTGCCGGCACCACAACGTCGTAGGCGCTGCGCAGGT
CAACTCCCGCCGCTTTGGCGGATCCCCTCACCGGCTCCAAAGCATTCTCG
GTGAGTTTGGCGAATCGCAGGACGCACGTGTCGATCTTCATCTTCTTGGC
AGCTGGAATGTCGGCGAAATCGGTTGATGGCATGTCGACTGATAACT
BS03616.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:33:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4584-PA | 567 | dUTPase-RA | 1..567 | 583..17 | 2835 | 100 | Minus |
CG4584-PB | 525 | dUTPase-RB | 1..525 | 541..17 | 2625 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:01:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-RA | 824 | CG4584-RA | 130..697 | 583..16 | 2840 | 100 | Minus |
dUTPase-RD | 750 | CG4584-RD | 69..623 | 570..16 | 2775 | 100 | Minus |
dUTPase-RB | 732 | CG4584-RB | 69..605 | 552..16 | 2685 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:01:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11011441..11012008 | 583..16 | 2840 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:01:19 has no hits.
BS03616.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:28:23 Download gff for
BS03616.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4584-PA | 1..567 | 17..583 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:43:40 Download gff for
BS03616.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4584-PA | 1..567 | 17..583 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:10:58 Download gff for
BS03616.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 125..697 | 16..588 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:39:37 Download gff for
BS03616.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 125..697 | 16..588 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:39:37 Download gff for
BS03616.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11011436..11012008 | 16..588 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:10:58 Download gff for
BS03616.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11011436..11012008 | 16..588 | 99 | | Minus |
BS03616.5prime Sequence
597 bp (596 high quality bases) assembled on 2005-12-01
> BS03616.5prime
GAAGTTATCAGTCGACATGCCATCAACCGATTTCGCCGACATTCCAGCTG
CCAAGAAGATGAAGATCGACACGTGCGTCCTGCGATTCGCCAAACTCACC
GAGAATGCTTTGGAGCCGGTGAGGGGATCCGCCAAAGCGGCGGGAGTTGA
CCTGCGCAGCGCCTACGACGTTGTGGTGCCGGCACGCGGAAAGGCCATTG
TCAAGACCGATCTGCAAGTGCAGGTTCCGGAGGGCTCCTACGGACGCGTA
GCCCCACGATCCGGGCTGGCGGTGAAGAACTTCATTGATGTGGGCGCCGG
TGTGGTGGACGAGGATTATCGCGGCAATCTCGGCGTCGTCCTGTTCAATC
ACTCAGATGTTGATTTCGAGGTGAAGCATGGCGACCGCATCGCCCAGTTC
ATTTGCGAGCGTATCTTCTATCCGCAACTGGTGATGGTGGACAAACTGGA
GGACACCGAGCGCGGCGAGGCAGGATTCGGTTCCACCGGAGTCAAGGATC
TGCCGGCAGCCAAGGCGCAGAACGGCAACGGAGAAAAGGCTGCCGAACCG
GAGGGAGCTGCTCCGGCTCCTGTTGCTACGTAAAAGCTTTCTAGACC
BS03616.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:33:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4584-PA | 567 | dUTPase-RA | 1..567 | 17..583 | 2835 | 100 | Plus |
CG4584-PB | 525 | dUTPase-RB | 1..525 | 59..583 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 03:49:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-RA | 824 | CG4584-RA | 130..697 | 17..584 | 2840 | 100 | Plus |
dUTPase-RD | 750 | CG4584-RD | 69..623 | 30..584 | 2775 | 100 | Plus |
dUTPase-RB | 732 | CG4584-RB | 69..605 | 48..584 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 03:49:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11011441..11012008 | 17..584 | 2840 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 03:49:42 has no hits.
BS03616.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:28:24 Download gff for
BS03616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4584-PA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:43:42 Download gff for
BS03616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4584-PA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:04:25 Download gff for
BS03616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 125..697 | 12..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:47:01 Download gff for
BS03616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 125..697 | 12..584 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:47:01 Download gff for
BS03616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11011436..11012008 | 12..584 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:04:25 Download gff for
BS03616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11011436..11012008 | 12..584 | 99 | | Plus |
BS03616.complete Sequence
599 bp (599 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ634725
> BS03616.complete
GAAGTTATCAGTCGACATGCCATCAACCGATTTCGCCGACATTCCAGCTG
CCAAGAAGATGAAGATCGACACGTGCGTCCTGCGATTCGCCAAACTCACC
GAGAATGCTTTGGAGCCGGTGAGGGGATCCGCCAAAGCGGCGGGAGTTGA
CCTGCGCAGCGCCTACGACGTTGTGGTGCCGGCACGCGGAAAGGCCATTG
TCAAGACCGATCTGCAAGTGCAGGTTCCGGAGGGCTCCTACGGACGCGTA
GCCCCACGATCCGGGCTGGCGGTGAAGAACTTCATTGATGTGGGCGCCGG
TGTGGTGGACGAGGATTATCGCGGCAATCTCGGCGTCGTCCTGTTCAATC
ACTCAGATGTTGATTTCGAGGTGAAGCATGGCGACCGCATCGCCCAGTTC
ATTTGCGAGCGTATCTTCTATCCGCAACTGGTGATGGTGGACAAACTGGA
GGACACCGAGCGCGGCGAGGCAGGATTCGGTTCCACCGGAGTCAAGGATC
TGCCGGCAGCCAAGGCGCAGAACGGCAACGGAGAAAAGGCTGCCGAACCG
GAGGGAGCTGCTCCGGCTCCTGTTGCTACGTAAAAGCTTTCTAGACCAT
BS03616.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:38:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-RA | 567 | CG4584-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
dUTPase-RB | 525 | CG4584-PB | 1..525 | 59..583 | 2625 | 100 | Plus |
dUTPase-RD | 525 | CG4584-PD | 1..525 | 59..583 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:38:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-RA | 824 | CG4584-RA | 130..697 | 17..584 | 2840 | 100 | Plus |
dUTPase-RD | 750 | CG4584-RD | 69..623 | 30..584 | 2775 | 100 | Plus |
dUTPase-RB | 732 | CG4584-RB | 69..605 | 48..584 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:38:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11011441..11012008 | 17..584 | 2840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:38:24 has no hits.
BS03616.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:41 Download gff for
BS03616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:29:31 Download gff for
BS03616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 102..674 | 12..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:40 Download gff for
BS03616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 130..694 | 17..581 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:41 Download gff for
BS03616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 102..674 | 12..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:19 Download gff for
BS03616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 130..694 | 17..581 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:19 Download gff for
BS03616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11011441..11012005 | 17..581 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:40 Download gff for
BS03616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11011441..11012005 | 17..581 | 100 | | Plus |
BS03616.pep Sequence
Translation from 16 to 582
> BS03616.pep
MPSTDFADIPAAKKMKIDTCVLRFAKLTENALEPVRGSAKAAGVDLRSAY
DVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFIDVGAGVVDED
YRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQLVMVDKLEDTERG
EAGFGSTGVKDLPAAKAQNGNGEKAAEPEGAAPAPVAT*
BS03616.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-PA | 188 | CG4584-PA | 1..188 | 1..188 | 959 | 100 | Plus |
dUTPase-PB | 174 | CG4584-PB | 1..174 | 15..188 | 887 | 100 | Plus |
dUTPase-PD | 174 | CG4584-PD | 1..174 | 15..188 | 887 | 100 | Plus |
dUTPase-PC | 174 | CG4584-PC | 1..174 | 15..188 | 887 | 100 | Plus |