Clone Sequence Records
BS03633.5prime Sequence
801 bp (800 high quality bases) assembled on 2005-12-01
> BS03633.5prime
GAAGTTATCAGTCGACATGAAAGTAGAGGCATTGGACAAATTCTGGGCTG
ACAAGAGCCGCTACGATCTTGCCGAGAAGCGATTCTACGAGGGTCCCCAG
AAGGTAACTGATCGCAGCCACTACAGCCCATTAGTAAGCGAAATCGCAAA
GGCTAGGGAACACATACAGAACTCGCTGGAAAAGATCGATGGCGTTACTC
TGGACGATGGCTTAAATTCCGAGCTGGCCAAGCGTCTGGCCCAATTGGAG
GGTGAACACAAGGAGTTGAAGACCCAGGTTTCCTTGTTGAACGAACTTTT
GACTGCCACAGTGAAGCGCTTGGAAACTCAGCTGAAATTGACGAATGGAG
TGTCGAAAGAGCCCGAGGTCGAAGCGAAAAAACCAGAAGCGAACGACGAC
GATGACGATGTGGATCTATTTGGATCGGACAGCGAGGAGGAGGATGGAGA
GGCCGCCCGCATAAGGGAGGAAAGGCTGGCAGCCTATGCTGCCAAGAAGG
CCAAGAAAGTTCAAATTATTGCCAAGTCGAACATCATTCTGGATGTTAAG
CCGTGGGACGATGAGACCGATCTGAAGGTTATGGAGACGGAAATCCGCAA
AATCACCCAGGACGGTCTACTGTGGGGAGCTTCCAAATTCGTGCCAGTTG
CCTTTGGCATTCAGAAACTGAGCATTTCATGCGTGGTTGAGGATGATAAG
GTTTCCATCGATTGGCTGACTGAGGAGATCGAGAAACTGGAAGACTTTGT
CCAAAGTGTTGACATCGCTGCGTTCAACAAAATCTAAAAGCTTTCTAGAC
C
BS03633.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4912-PB | 771 | eEF1delta-RB | 1..771 | 17..787 | 3855 | 100 | Plus |
CG4912-PA | 690 | eEF1delta-RA | 85..690 | 182..787 | 3030 | 100 | Plus |
CG4912-PA | 690 | eEF1delta-RA | 1..87 | 17..103 | 435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 03:50:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eEF1delta-RB | 928 | CG4912-RB | 67..837 | 17..787 | 3855 | 100 | Plus |
eEF1delta-RA | 847 | CG4912-RA | 151..756 | 182..787 | 3030 | 100 | Plus |
eEF1delta-RA | 847 | CG4912-RA | 67..153 | 17..103 | 435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 03:50:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10233755..10234359 | 183..787 | 3025 | 100 | Plus |
2L | 23513712 | 2L | 10232573..10232663 | 17..107 | 455 | 100 | Plus |
2L | 23513712 | 2L | 10233478..10233561 | 101..184 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 03:50:03 has no hits.
BS03633.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:28:47 Download gff for
BS03633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4912-PB | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:44:11 Download gff for
BS03633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4912-PB | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:04:30 Download gff for
BS03633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 67..837 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:47:05 Download gff for
BS03633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 67..837 | 17..787 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:47:05 Download gff for
BS03633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10232573..10232659 | 17..103 | 100 | -> | Plus |
2L | 10233481..10233561 | 104..184 | 100 | -> | Plus |
2L | 10233757..10234359 | 185..787 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:04:30 Download gff for
BS03633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10232573..10232659 | 17..103 | 100 | -> | Plus |
arm_2L | 10233481..10233561 | 104..184 | 100 | -> | Plus |
arm_2L | 10233757..10234359 | 185..787 | 100 | | Plus |
BS03633.3prime Sequence
801 bp (800 high quality bases) assembled on 2005-12-01
> BS03633.3prime
ATGGTCTAGAAAGCTTTTAGATTTTGTTGAACGCAGCGATGTCAACACTT
TGGACAAAGTCTTCCAGTTTCTCGATCTCCTCAGTCAGCCAATCGATGGA
AACCTTATCATCCTCAACCACGCATGAAATGCTCAGTTTCTGAATGCCAA
AGGCAACTGGCACGAATTTGGAAGCTCCCCACAGTAGACCGTCCTGGGTG
ATTTTGCGGATTTCCGTCTCCATAACCTTCAGATCGGTCTCATCGTCCCA
CGGCTTAACATCCAGAATGATGTTCGACTTGGCAATAATTTGAACTTTCT
TGGCCTTCTTGGCAGCATAGGCTGCCAGCCTTTCCTCCCTTATGCGGGCG
GCCTCTCCATCCTCCTCCTCGCTGTCCGATCCAAATAGATCCACATCGTC
ATCGTCGTCGTTCGCTTCTGGTTTTTTCGCTTCGACCTCGGGCTCTTTCG
ACACTCCATTCGTCAATTTCAGCTGAGTTTCCAAGCGCTTCACTGTGGCA
GTCAAAAGTTCGTTCAACAAGGAAACCTGGGTCTTCAACTCCTTGTGTTC
ACCCTCCAATTGGGCCAGACGCTTGGCCAGCTCGGAATTTAAGCCATCGT
CCAGAGTAACGCCATCGATCTTTTCCAGCGAGTTCTGTATGTGTTCCCTA
GCCTTTGCGATTTCGCTTACTAATGGGCTGTAGTGGCTGCGATCAGTTAC
CTTCTGGGGACCCTCGTAGAATCGCTTCTCGGCAAGATCGTAGCGGCTCT
TGTCAGCCCAGAATTTGTCCAATGCCTCTACTTTCATGTCGACTGATAAC
T
BS03633.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4912-PB | 771 | eEF1delta-RB | 1..771 | 787..17 | 3855 | 100 | Minus |
CG4912-PA | 690 | eEF1delta-RA | 85..690 | 622..17 | 3030 | 100 | Minus |
CG4912-PA | 690 | eEF1delta-RA | 1..87 | 787..701 | 435 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:47:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eEF1delta-RB | 928 | CG4912-RB | 67..837 | 787..17 | 3855 | 100 | Minus |
eEF1delta-RA | 847 | CG4912-RA | 151..756 | 622..17 | 3030 | 100 | Minus |
eEF1delta-RA | 847 | CG4912-RA | 67..153 | 787..701 | 435 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:47:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10233755..10234359 | 621..17 | 3025 | 100 | Minus |
2L | 23513712 | 2L | 10232573..10232663 | 787..697 | 455 | 100 | Minus |
2L | 23513712 | 2L | 10233478..10233561 | 703..620 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:47:41 has no hits.
BS03633.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:28:46 Download gff for
BS03633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4912-PB | 1..771 | 17..787 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:44:09 Download gff for
BS03633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4912-PB | 1..771 | 17..787 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:08:38 Download gff for
BS03633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 67..837 | 17..787 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:10:03 Download gff for
BS03633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 67..837 | 17..787 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:10:03 Download gff for
BS03633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10232573..10232659 | 701..787 | 100 | -> | Minus |
2L | 10233481..10233561 | 620..700 | 100 | -> | Minus |
2L | 10233757..10234359 | 17..619 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:08:38 Download gff for
BS03633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10232573..10232659 | 701..787 | 100 | -> | Minus |
arm_2L | 10233481..10233561 | 620..700 | 100 | -> | Minus |
arm_2L | 10233757..10234359 | 17..619 | 100 | | Minus |
BS03633.complete Sequence
803 bp (803 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ634730
> BS03633.complete
GAAGTTATCAGTCGACATGAAAGTAGAGGCATTGGACAAATTCTGGGCTG
ACAAGAGCCGCTACGATCTTGCCGAGAAGCGATTCTACGAGGGTCCCCAG
AAGGTAACTGATCGCAGCCACTACAGCCCATTAGTAAGCGAAATCGCAAA
GGCTAGGGAACACATACAGAACTCGCTGGAAAAGATCGATGGCGTTACTC
TGGACGATGGCTTAAATTCCGAGCTGGCCAAGCGTCTGGCCCAATTGGAG
GGTGAACACAAGGAGTTGAAGACCCAGGTTTCCTTGTTGAACGAACTTTT
GACTGCCACAGTGAAGCGCTTGGAAACTCAGCTGAAATTGACGAATGGAG
TGTCGAAAGAGCCCGAGGTCGAAGCGAAAAAACCAGAAGCGAACGACGAC
GATGACGATGTGGATCTATTTGGATCGGACAGCGAGGAGGAGGATGGAGA
GGCCGCCCGCATAAGGGAGGAAAGGCTGGCAGCCTATGCTGCCAAGAAGG
CCAAGAAAGTTCAAATTATTGCCAAGTCGAACATCATTCTGGATGTTAAG
CCGTGGGACGATGAGACCGATCTGAAGGTTATGGAGACGGAAATCCGCAA
AATCACCCAGGACGGTCTACTGTGGGGAGCTTCCAAATTCGTGCCAGTTG
CCTTTGGCATTCAGAAACTGAGCATTTCATGCGTGGTTGAGGATGATAAG
GTTTCCATCGATTGGCTGACTGAGGAGATCGAGAAACTGGAAGACTTTGT
CCAAAGTGTTGACATCGCTGCGTTCAACAAAATCTAAAAGCTTTCTAGAC
CAT
BS03633.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:54:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eEF1delta-RB | 771 | CG4912-PB | 1..771 | 17..787 | 3855 | 100 | Plus |
eEF1delta-RA | 690 | CG4912-PA | 85..690 | 182..787 | 3030 | 100 | Plus |
eEF1delta-RA | 690 | CG4912-PA | 1..87 | 17..103 | 435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:54:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eEF1delta-RB | 928 | CG4912-RB | 67..837 | 17..787 | 3855 | 100 | Plus |
eEF1delta-RA | 847 | CG4912-RA | 151..756 | 182..787 | 3030 | 100 | Plus |
eEF1delta-RA | 847 | CG4912-RA | 67..153 | 17..103 | 435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:54:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10233755..10234359 | 183..787 | 3025 | 100 | Plus |
2L | 23513712 | 2L | 10232573..10232663 | 17..107 | 455 | 100 | Plus |
2L | 23513712 | 2L | 10233478..10233561 | 101..184 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:54:57 has no hits.
BS03633.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:28:59 Download gff for
BS03633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:12:13 Download gff for
BS03633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 63..833 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:34:09 Download gff for
BS03633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 67..835 | 17..785 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:28:59 Download gff for
BS03633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 63..833 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:24 Download gff for
BS03633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 67..835 | 17..785 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:24 Download gff for
BS03633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10232573..10232659 | 17..103 | 100 | -> | Plus |
2L | 10233481..10233561 | 104..184 | 100 | -> | Plus |
2L | 10233757..10234357 | 185..785 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:34:09 Download gff for
BS03633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10232573..10232659 | 17..103 | 100 | -> | Plus |
arm_2L | 10233481..10233561 | 104..184 | 100 | -> | Plus |
arm_2L | 10233757..10234357 | 185..785 | 100 | | Plus |
BS03633.pep Sequence
Translation from 16 to 786
> BS03633.pep
MKVEALDKFWADKSRYDLAEKRFYEGPQKVTDRSHYSPLVSEIAKAREHI
QNSLEKIDGVTLDDGLNSELAKRLAQLEGEHKELKTQVSLLNELLTATVK
RLETQLKLTNGVSKEPEVEAKKPEANDDDDDVDLFGSDSEEEDGEAARIR
EERLAAYAAKKAKKVQIIAKSNIILDVKPWDDETDLKVMETEIRKITQDG
LLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDI
AAFNKI*
BS03633.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eEF1delta-PB | 256 | CG4912-PB | 1..256 | 1..256 | 1287 | 100 | Plus |
eEF1delta-PA | 229 | CG4912-PA | 1..229 | 1..256 | 1114 | 89.5 | Plus |
Ef1beta-PC | 222 | CG6341-PC | 82..222 | 115..256 | 506 | 70.4 | Plus |
Ef1beta-PB | 222 | CG6341-PB | 82..222 | 115..256 | 506 | 70.4 | Plus |