Clone Sequence Records
BS03640.3prime Sequence
555 bp (554 high quality bases) assembled on 2005-12-01
> BS03640.3prime
ATGGTCTAGAAAGCTTTTACTGATGTGAATAGCCCGTCTTCGTCTTGCGG
TTGAGGAACTTGTACAAGTAGAGGATGCGTTTCTCCATTTCCCGCCACTT
GGTGGGTCGGGCGATGGGATACTTGGACTTCTCGAGCAGCTTACGTTTGC
GGAGAAGCACCTGGTACTCATTGCCGGAGACGCCACGCAGCCAGGATGGC
AGGGAGTAGAGCACCTTGACTGGATGCAGACGATCGTTGCCCAGGATGTC
GATGTAGTCGTTCTGGCCAAACAACGCACGTTTCTTTGACCAGGCGTTCT
TTGGGCGATACACCGGCATCGGCAGTTTCTGTCCATTGTCCACATGGGGG
AGTAGTCCGCTCTTGAAGATCTTGTCCTCATATCCATAGCGCCGCACAGT
GGGACCGCGTGCTCGTCGCTCGGCATGGGATAACTGCCGCACGGTGTAGC
TGGTTGATGCCATCGGAGCCAAGGGTTTTCCGCCCACAGCAAGGAGCGTG
GCTCTGCCAAGTTTTTGAATCATACTTCCCAGCCAAGACATGTCGACTGA
TAACT
BS03640.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13098-PA | 525 | mRpL51-RA | 1..525 | 541..17 | 2625 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:58:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL51-RA | 628 | CG13098-RA | 88..615 | 542..15 | 2640 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8516766..8517293 | 15..542 | 2640 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:58:07 has no hits.
BS03640.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:29:01 Download gff for
BS03640.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13098-PA | 1..525 | 17..541 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:44:29 Download gff for
BS03640.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13098-PA | 1..525 | 17..541 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:35:53 Download gff for
BS03640.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 82..615 | 15..549 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:15:21 Download gff for
BS03640.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 82..615 | 15..549 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:15:21 Download gff for
BS03640.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8516766..8517299 | 15..549 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:35:53 Download gff for
BS03640.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8516766..8517299 | 15..549 | 99 | | Plus |
BS03640.5prime Sequence
555 bp (554 high quality bases) assembled on 2005-11-29
> BS03640.5prime
GAAGTTATCAGTCGACATGTCTTGGCTGGGAAGTATGATTCAAAAACTTG
GCAGAGCCACGCTCCTTGCTGTGGGCGGAAAACCCTTGGCTCCGATGGCA
TCAACCAGCTACACCGTGCGGCAGTTATCCCATGCCGAGCGACGAGCACG
CGGTCCCACTGTGCGGCGCTATGGATATGAGGACAAGATCTTCAAGAGCG
GACTACTCCCCCATGTGGACAATGGACAGAAACTGCCGATGCCGGTGTAT
CGCCCAAAGAACGCCTGGTCAAAGAAACGTGCGTTGTTTGGCCAGAACGA
CTACATCGACATCCTGGGCAACGATCGTCTGCATCCAGTCAAGGTGCTCT
ACTCCCTGCCATCCTGGCTGCGTGGCGTCTCCGGCAATGAGTACCAGGTG
CTTCTCCGCAAACGTAAGCTGCTCGAGAAGTCCAAGTATCCCATCGCCCG
ACCCACCAAGTGGCGGGAAATGGAGAAACGCATCCTCTACTTGTACAAGT
TCCTCAACCGCAAGACGAAGACGGGCTATTCACATCAGTAAAAGCTTTCT
AGACC
BS03640.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13098-PA | 525 | mRpL51-RA | 1..525 | 17..541 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL51-RA | 628 | CG13098-RA | 88..615 | 16..543 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8516766..8517293 | 543..16 | 2640 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:00:31 has no hits.
BS03640.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:29:01 Download gff for
BS03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13098-PA | 1..525 | 17..541 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:44:31 Download gff for
BS03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13098-PA | 1..525 | 17..541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:27:35 Download gff for
BS03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 82..615 | 9..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:28:30 Download gff for
BS03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 82..615 | 9..543 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:28:30 Download gff for
BS03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8516766..8517299 | 9..543 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:27:35 Download gff for
BS03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8516766..8517299 | 9..543 | 99 | | Minus |
BS03640.complete Sequence
557 bp (557 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ634735
> BS03640.complete
GAAGTTATCAGTCGACATGTCTTGGCTGGGAAGTATGATTCAAAAACTTG
GCAGAGCCACGCTCCTTGCTGTGGGCGGAAAACCCTTGGCTCCGATGGCA
TCAACCAGCTACACCGTGCGGCAGTTATCCCATGCCGAGCGACGAGCACG
CGGTCCCACTGTGCGGCGCTATGGATATGAGGACAAGATCTTCAAGAGCG
GACTACTCCCCCATGTGGACAATGGACAGAAACTGCCGATGCCGGTGTAT
CGCCCAAAGAACGCCTGGTCAAAGAAACGTGCGTTGTTTGGCCAGAACGA
CTACATCGACATCCTGGGCAACGATCGTCTGCATCCAGTCAAGGTGCTCT
ACTCCCTGCCATCCTGGCTGCGTGGCGTCTCCGGCAATGAGTACCAGGTG
CTTCTCCGCAAACGTAAGCTGCTCGAGAAGTCCAAGTATCCCATCGCCCG
ACCCACCAAGTGGCGGGAAATGGAGAAACGCATCCTCTACTTGTACAAGT
TCCTCAACCGCAAGACGAAGACGGGCTATTCACATCAGTAAAAGCTTTCT
AGACCAT
BS03640.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:34:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL51-RA | 525 | CG13098-PA | 1..525 | 17..541 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:34:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL51-RA | 628 | CG13098-RA | 88..615 | 16..543 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:34:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8516766..8517293 | 543..16 | 2640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:34:43 has no hits.
BS03640.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:53:44 Download gff for
BS03640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 1..525 | 17..541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:29:29 Download gff for
BS03640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 79..612 | 9..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:13:21 Download gff for
BS03640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 89..611 | 17..539 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:53:45 Download gff for
BS03640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 79..612 | 9..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:25:32 Download gff for
BS03640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 89..611 | 17..539 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:25:32 Download gff for
BS03640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8516770..8517292 | 17..539 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:13:21 Download gff for
BS03640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8516770..8517292 | 17..539 | 100 | | Minus |
BS03640.pep Sequence
Translation from 16 to 540
> BS03640.pep
MSWLGSMIQKLGRATLLAVGGKPLAPMASTSYTVRQLSHAERRARGPTVR
RYGYEDKIFKSGLLPHVDNGQKLPMPVYRPKNAWSKKRALFGQNDYIDIL
GNDRLHPVKVLYSLPSWLRGVSGNEYQVLLRKRKLLEKSKYPIARPTKWR
EMEKRILYLYKFLNRKTKTGYSHQ*
BS03640.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:48:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL51-PA | 174 | CG13098-PA | 1..174 | 1..174 | 919 | 100 | Plus |
