Clone Sequence Records
BS03651.5prime Sequence
684 bp (683 high quality bases) assembled on 2005-11-29
> BS03651.5prime
GAAGTTATCAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAG
TGAACGACTGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTC
AACGAGGAGGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGAT
GCTTATCCTGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCT
ACGCGATGAACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGC
AACGGCAACTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAAT
GCGTCTGAGGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGA
ATGCTGATGTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAA
CAATACGGGTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCT
AAATGAAGTCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCA
GCTCGAACAACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAG
TTCTTCAACACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAG
CACCTCGTCACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGAT
CGCCGGTTCCCGCAAACTAAAAGCTTTCTAGACC
BS03651.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-PA | 654 | CG15735-RA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:39:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 1251 | CG15735-RA | 542..1195 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:39:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12019181..12019325 | 17..161 | 725 | 100 | Plus |
X | 23542271 | X | 12019628..12019760 | 162..294 | 665 | 100 | Plus |
X | 23542271 | X | 12020006..12020138 | 409..541 | 665 | 100 | Plus |
X | 23542271 | X | 12020535..12020663 | 542..670 | 645 | 100 | Plus |
X | 23542271 | X | 12019821..12019941 | 289..409 | 605 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 15:39:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 625..565 | 113 | 67.2 | Minus |
BS03651.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:29:19 Download gff for
BS03651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:44:56 Download gff for
BS03651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:30:54 Download gff for
BS03651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:23:35 Download gff for
BS03651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 17..670 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:23:35 Download gff for
BS03651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12019181..12019325 | 17..161 | 100 | -> | Plus |
X | 12019628..12019758 | 162..292 | 100 | -> | Plus |
X | 12019825..12019941 | 293..409 | 100 | -> | Plus |
X | 12020007..12020138 | 410..541 | 100 | -> | Plus |
X | 12020535..12020663 | 542..670 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:30:54 Download gff for
BS03651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11914568..11914696 | 542..670 | 100 | | Plus |
arm_X | 11913214..11913358 | 17..161 | 100 | -> | Plus |
arm_X | 11913661..11913791 | 162..292 | 100 | -> | Plus |
arm_X | 11913858..11913974 | 293..409 | 100 | -> | Plus |
arm_X | 11914040..11914171 | 410..541 | 100 | -> | Plus |
BS03651.3prime Sequence
684 bp (683 high quality bases) assembled on 2005-12-01
> BS03651.3prime
ATGGTCTAGAAAGCTTTTAGTTTGCGGGAACCGGCGATCCAGATGCAAGA
GATGAGGACGTGGGAGACACCGATGGTGACGAGGTGCTGGCCGCAGCTCC
GCTTTCCGGGACGGGCGATGGCCTCGTGTTGAAGAACTGTTTGATGATGC
GCTTGATGTAGTTGCATGAAGTTTCGTTGTTCGAGCTGGACACCACGTTG
TCCACTCGGTACGGCGGCGAGATGGTGACTTCATTTAGGATCTGTATGTT
AAGTCCTTGCCAGGAGACTTCATTGTACCCGTATTGTTTGGCTATCGCTC
TATAGAGTTCCTGCGCCTCTGGACTGACATCAGCATTCTTAGACTTCAAG
TAGTCCTGTCTTCGCTCAACTGTTTTCCTCAGACGCATTTTGACCTGTTC
CAGATTAAGCTTTTGCGGATCATCAAAGTTGCCGTTGCACTCCTTGATCA
CCTGCACGTTGCTGCAGAGCGAGAGGTTCATCGCGTAGATATCACTCAGC
TCCTCCGTGGACTTGGATCGGCATTTCAGGATAAGCATCTTTGTGTTGTG
ATCGAAGGCCAGCACCTCGCCCTCCACCTCCTCGTTGAAACAGGTCGTAC
AGACGACTGTGGATCCGATGCTGAAGCAGTCGTTCACTGCATTCACTGCG
CTCGCAGCGGCAGCGGCCATGTCGACTGATAACT
BS03651.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-PA | 654 | CG15735-RA | 1..654 | 670..17 | 3270 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:57:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 1251 | CG15735-RA | 542..1195 | 670..17 | 3270 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:57:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12019181..12019325 | 670..526 | 725 | 100 | Minus |
X | 23542271 | X | 12019628..12019760 | 525..393 | 665 | 100 | Minus |
X | 23542271 | X | 12020006..12020138 | 278..146 | 665 | 100 | Minus |
X | 23542271 | X | 12020535..12020663 | 145..17 | 645 | 100 | Minus |
X | 23542271 | X | 12019821..12019941 | 398..278 | 605 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 23:57:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 62..122 | 113 | 67.2 | Plus |
BS03651.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:29:18 Download gff for
BS03651.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 17..670 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:44:55 Download gff for
BS03651.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 17..670 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 14:00:48 Download gff for
BS03651.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 17..670 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:38 Download gff for
BS03651.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 17..670 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:38 Download gff for
BS03651.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12019181..12019325 | 526..670 | 100 | -> | Minus |
X | 12019628..12019758 | 395..525 | 100 | -> | Minus |
X | 12019825..12019941 | 278..394 | 100 | -> | Minus |
X | 12020007..12020138 | 146..277 | 100 | -> | Minus |
X | 12020535..12020663 | 17..145 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 14:00:48 Download gff for
BS03651.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11913214..11913358 | 526..670 | 100 | -> | Minus |
arm_X | 11913661..11913791 | 395..525 | 100 | -> | Minus |
arm_X | 11913858..11913974 | 278..394 | 100 | -> | Minus |
arm_X | 11914040..11914171 | 146..277 | 100 | -> | Minus |
arm_X | 11914568..11914696 | 17..145 | 100 | | Minus |
BS03651.complete Sequence
686 bp (686 high quality bases) assembled on 2005-10-17
> BS03651.complete
GAAGTTATCAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAG
TGAACGACTGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTC
AACGAGGAGGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGAT
GCTTATCCTGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCT
ACGCGATGAACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGC
AACGGCAACTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAAT
GCGTCTGAGGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGA
ATGCTGATGTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAA
CAATACGGGTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCT
AAATGAAGTCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCA
GCTCGAACAACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAG
TTCTTCAACACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAG
CACCTCGTCACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGAT
CGCCGGTTCCCGCAAACTAAAAGCTTTCTAGACCAT
BS03651.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 654 | CG15735-PA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 1251 | CG15735-RA | 542..1195 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12019181..12019325 | 17..161 | 725 | 100 | Plus |
X | 23542271 | X | 12019628..12019760 | 162..294 | 665 | 100 | Plus |
X | 23542271 | X | 12020006..12020138 | 409..541 | 665 | 100 | Plus |
X | 23542271 | X | 12020535..12020663 | 542..670 | 645 | 100 | Plus |
X | 23542271 | X | 12019821..12019941 | 289..409 | 605 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:42:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 625..565 | 113 | 67.2 | Minus |
BS03651.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:19:06 Download gff for
BS03651.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 1..654 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:00:09 Download gff for
BS03651.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 538..1191 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:20 Download gff for
BS03651.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1193 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:19:06 Download gff for
BS03651.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 538..1191 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:03:15 Download gff for
BS03651.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1193 | 17..668 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:03:15 Download gff for
BS03651.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12019181..12019325 | 17..161 | 100 | -> | Plus |
X | 12019628..12019758 | 162..292 | 100 | -> | Plus |
X | 12019825..12019941 | 293..409 | 100 | -> | Plus |
X | 12020007..12020138 | 410..541 | 100 | -> | Plus |
X | 12020535..12020661 | 542..668 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:20 Download gff for
BS03651.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11913214..11913358 | 17..161 | 100 | -> | Plus |
arm_X | 11913661..11913791 | 162..292 | 100 | -> | Plus |
arm_X | 11913858..11913974 | 293..409 | 100 | -> | Plus |
arm_X | 11914040..11914171 | 410..541 | 100 | -> | Plus |
arm_X | 11914568..11914694 | 542..668 | 100 | | Plus |
BS03651.pep Sequence
Translation from 16 to 669
> BS03651.pep
MAAAAASAVNAVNDCFSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKC
RSKSTEELSDIYAMNLSLCSNVQVIKECNGNFDDPQKLNLEQVKMRLRKT
VERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQGLNIQILNEVTI
SPPYRVDNVVSSSNNETSCNYIKRIIKQFFNTRPSPVPESGAAASTSSPS
VSPTSSSLASGSPVPAN*
BS03651.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:12:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-PA | 217 | CG15735-PA | 1..217 | 1..217 | 1108 | 100 | Plus |
CG14164-PB | 186 | CG14164-PB | 1..181 | 9..179 | 260 | 30.4 | Plus |
CG14164-PA | 186 | CG14164-PA | 1..181 | 9..179 | 260 | 30.4 | Plus |