Clone BS03651 Report

Search the DGRC for BS03651

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:36
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG15735-RA
Protein status:BS03651.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS03651.5prime Sequence

684 bp (683 high quality bases) assembled on 2005-11-29

> BS03651.5prime
GAAGTTATCAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAG
TGAACGACTGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTC
AACGAGGAGGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGAT
GCTTATCCTGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCT
ACGCGATGAACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGC
AACGGCAACTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAAT
GCGTCTGAGGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGA
ATGCTGATGTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAA
CAATACGGGTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCT
AAATGAAGTCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCA
GCTCGAACAACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAG
TTCTTCAACACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAG
CACCTCGTCACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGAT
CGCCGGTTCCCGCAAACTAAAAGCTTTCTAGACC

BS03651.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-PA 654 CG15735-RA 1..654 17..670 3270 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:39:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 1251 CG15735-RA 542..1195 17..670 3270 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:39:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12019181..12019325 17..161 725 100 Plus
X 23542271 X 12019628..12019760 162..294 665 100 Plus
X 23542271 X 12020006..12020138 409..541 665 100 Plus
X 23542271 X 12020535..12020663 542..670 645 100 Plus
X 23542271 X 12019821..12019941 289..409 605 100 Plus
Blast to na_te.dros performed 2015-02-11 15:39:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4845..4904 625..565 113 67.2 Minus

BS03651.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:29:19 Download gff for BS03651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 17..670 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:44:56 Download gff for BS03651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 17..670 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:30:54 Download gff for BS03651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 17..670 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:23:35 Download gff for BS03651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 17..670 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:23:35 Download gff for BS03651.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12019181..12019325 17..161 100 -> Plus
X 12019628..12019758 162..292 100 -> Plus
X 12019825..12019941 293..409 100 -> Plus
X 12020007..12020138 410..541 100 -> Plus
X 12020535..12020663 542..670 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:30:54 Download gff for BS03651.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11914568..11914696 542..670 100   Plus
arm_X 11913214..11913358 17..161 100 -> Plus
arm_X 11913661..11913791 162..292 100 -> Plus
arm_X 11913858..11913974 293..409 100 -> Plus
arm_X 11914040..11914171 410..541 100 -> Plus

BS03651.3prime Sequence

684 bp (683 high quality bases) assembled on 2005-12-01

> BS03651.3prime
ATGGTCTAGAAAGCTTTTAGTTTGCGGGAACCGGCGATCCAGATGCAAGA
GATGAGGACGTGGGAGACACCGATGGTGACGAGGTGCTGGCCGCAGCTCC
GCTTTCCGGGACGGGCGATGGCCTCGTGTTGAAGAACTGTTTGATGATGC
GCTTGATGTAGTTGCATGAAGTTTCGTTGTTCGAGCTGGACACCACGTTG
TCCACTCGGTACGGCGGCGAGATGGTGACTTCATTTAGGATCTGTATGTT
AAGTCCTTGCCAGGAGACTTCATTGTACCCGTATTGTTTGGCTATCGCTC
TATAGAGTTCCTGCGCCTCTGGACTGACATCAGCATTCTTAGACTTCAAG
TAGTCCTGTCTTCGCTCAACTGTTTTCCTCAGACGCATTTTGACCTGTTC
CAGATTAAGCTTTTGCGGATCATCAAAGTTGCCGTTGCACTCCTTGATCA
CCTGCACGTTGCTGCAGAGCGAGAGGTTCATCGCGTAGATATCACTCAGC
TCCTCCGTGGACTTGGATCGGCATTTCAGGATAAGCATCTTTGTGTTGTG
ATCGAAGGCCAGCACCTCGCCCTCCACCTCCTCGTTGAAACAGGTCGTAC
AGACGACTGTGGATCCGATGCTGAAGCAGTCGTTCACTGCATTCACTGCG
CTCGCAGCGGCAGCGGCCATGTCGACTGATAACT

BS03651.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-PA 654 CG15735-RA 1..654 670..17 3270 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:57:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 1251 CG15735-RA 542..1195 670..17 3270 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:57:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12019181..12019325 670..526 725 100 Minus
X 23542271 X 12019628..12019760 525..393 665 100 Minus
X 23542271 X 12020006..12020138 278..146 665 100 Minus
X 23542271 X 12020535..12020663 145..17 645 100 Minus
X 23542271 X 12019821..12019941 398..278 605 100 Minus
Blast to na_te.dros performed 2015-02-11 23:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4845..4904 62..122 113 67.2 Plus

BS03651.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:29:18 Download gff for BS03651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 17..670 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:44:55 Download gff for BS03651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 17..670 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 14:00:48 Download gff for BS03651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 17..670 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:38 Download gff for BS03651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 17..670 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:38 Download gff for BS03651.3prime
Subject Subject Range Query Range Percent Splice Strand
X 12019181..12019325 526..670 100 -> Minus
X 12019628..12019758 395..525 100 -> Minus
X 12019825..12019941 278..394 100 -> Minus
X 12020007..12020138 146..277 100 -> Minus
X 12020535..12020663 17..145 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 14:00:48 Download gff for BS03651.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11913214..11913358 526..670 100 -> Minus
arm_X 11913661..11913791 395..525 100 -> Minus
arm_X 11913858..11913974 278..394 100 -> Minus
arm_X 11914040..11914171 146..277 100 -> Minus
arm_X 11914568..11914696 17..145 100   Minus

BS03651.complete Sequence

686 bp (686 high quality bases) assembled on 2005-10-17

> BS03651.complete
GAAGTTATCAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAG
TGAACGACTGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTC
AACGAGGAGGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGAT
GCTTATCCTGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCT
ACGCGATGAACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGC
AACGGCAACTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAAT
GCGTCTGAGGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGA
ATGCTGATGTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAA
CAATACGGGTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCT
AAATGAAGTCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCA
GCTCGAACAACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAG
TTCTTCAACACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAG
CACCTCGTCACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGAT
CGCCGGTTCCCGCAAACTAAAAGCTTTCTAGACCAT

BS03651.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 654 CG15735-PA 1..654 17..670 3270 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 1251 CG15735-RA 542..1195 17..670 3270 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12019181..12019325 17..161 725 100 Plus
X 23542271 X 12019628..12019760 162..294 665 100 Plus
X 23542271 X 12020006..12020138 409..541 665 100 Plus
X 23542271 X 12020535..12020663 542..670 645 100 Plus
X 23542271 X 12019821..12019941 289..409 605 100 Plus
Blast to na_te.dros performed 2014-11-27 07:42:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4845..4904 625..565 113 67.2 Minus

BS03651.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:19:06 Download gff for BS03651.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 1..654 17..670 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:00:09 Download gff for BS03651.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 538..1191 17..670 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:20 Download gff for BS03651.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1193 17..668 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:19:06 Download gff for BS03651.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 538..1191 17..670 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:03:15 Download gff for BS03651.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1193 17..668 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:03:15 Download gff for BS03651.complete
Subject Subject Range Query Range Percent Splice Strand
X 12019181..12019325 17..161 100 -> Plus
X 12019628..12019758 162..292 100 -> Plus
X 12019825..12019941 293..409 100 -> Plus
X 12020007..12020138 410..541 100 -> Plus
X 12020535..12020661 542..668 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:20 Download gff for BS03651.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11913214..11913358 17..161 100 -> Plus
arm_X 11913661..11913791 162..292 100 -> Plus
arm_X 11913858..11913974 293..409 100 -> Plus
arm_X 11914040..11914171 410..541 100 -> Plus
arm_X 11914568..11914694 542..668 100   Plus

BS03651.pep Sequence

Translation from 16 to 669

> BS03651.pep
MAAAAASAVNAVNDCFSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKC
RSKSTEELSDIYAMNLSLCSNVQVIKECNGNFDDPQKLNLEQVKMRLRKT
VERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQGLNIQILNEVTI
SPPYRVDNVVSSSNNETSCNYIKRIIKQFFNTRPSPVPESGAAASTSSPS
VSPTSSSLASGSPVPAN*

BS03651.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-PA 217 CG15735-PA 1..217 1..217 1108 100 Plus
CG14164-PB 186 CG14164-PB 1..181 9..179 260 30.4 Plus
CG14164-PA 186 CG14164-PA 1..181 9..179 260 30.4 Plus