Clone Sequence Records
BS03663.3prime Sequence
879 bp (845 high quality bases) assembled on 2005-12-01
> BS03663.3prime
ATGGTCTAGAAAGCTTCTACTTAGCGGCCTGCTGCTTCAACTGCTCCTGG
TACATGTAGTGCAGCTCCATGCAGTCGGTGTTGGAGATGTTTACCCAGCC
GTCCTCCTTAATGTGATACACGCGAATGATACCACCGGAGTAGGCATCCC
TGAAGGTGGCATGGTAGATGGCGCGACGTCCCAGCTCCTGGGCCTCCTTG
TCCTCCAGGTCCCAATGATAGCCAGAGTCCAGGACACCGTAGGCGTACAG
CGATCCACTACCAACAGAGAACAAATTGCCAGGCGTGCGAGATCCCTCGG
AGTCCACATAGTAGAGGCCTGGACCACGCTTATCGTAACCGGCCAGCATC
ATGCCCATGCTCAGACCCATTCCCTTGTATTCGTGGGCAATGTTGGCCAT
TATCTTGCTGGCGGCGGCCACCGAGATGCGTTCCTTGTTTCGAAGCTCGT
GAAGGCGGCATTCCTTCGAAAGGACCCTGTCCCAGTAAACGCAATCGGCT
GCGCCACCGGCCAAGGTGCCCAGCATGAACTGATTGATCTCCACGATCTT
CTTCATCGACTGGGAGCCAATGTACGATCCACCCGTGGCACGGGAATCGA
CTGCCAGGAGAACGCCGCCCTTGAACTTGAAGCCCAACGTTGTGGTGCCG
TGATCGAAGTTGATTTTGACGCCGGTCTTGTCGCCATTGGCCTGGATCTG
ATTAAGGTTGTGCAGGGGGTTCTCGAATGGCGGAGCAGCCAGTGTGTAGG
GATTGGCCAGATTGCACATAAGCCCTTTTTGCTCTTCCTCCACATCCGCC
GATGACCAGGCATTGGGCCGCATGTACGGAGCATTCGATATCTTGCAGAT
TTCAGCTAAAGCCATGTCGACTGATAACT
BS03663.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12323-PB | 849 | Prosbeta5-RB | 1..849 | 865..17 | 4245 | 100 | Minus |
CG12323-PA | 849 | Prosbeta5-RA | 1..849 | 865..17 | 4245 | 100 | Minus |
CG31742-PA | 840 | CG31742-RA | 478..523 | 382..337 | 155 | 93.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:01:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta5-RA | 1139 | CG12323-RA | 96..945 | 865..16 | 4250 | 100 | Minus |
Prosbeta5-RB | 1076 | CG12323-RB | 33..882 | 865..16 | 4250 | 100 | Minus |
Prosbeta5R1-RA | 1107 | CG9868-RA | 373..609 | 575..339 | 255 | 74.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:01:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10820282..10820984 | 718..16 | 3515 | 100 | Minus |
2R | 25286936 | 2R | 10820073..10820219 | 865..719 | 735 | 100 | Minus |
2R | 25286936 | 2R | 23309152..23309388 | 339..575 | 255 | 73.8 | Plus |
2L | 23513712 | 2L | 17990976..17991021 | 382..337 | 185 | 93.5 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:01:53 has no hits.
BS03663.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:29:35 Download gff for
BS03663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12323-PA | 1..849 | 17..865 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:45:17 Download gff for
BS03663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12323-PA | 1..849 | 17..865 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:11:02 Download gff for
BS03663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RB | 31..889 | 5..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:40:56 Download gff for
BS03663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RB | 31..889 | 5..868 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:40:56 Download gff for
BS03663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10820071..10820219 | 719..868 | 99 | -> | Minus |
2R | 10820282..10820991 | 5..718 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:11:02 Download gff for
BS03663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6707576..6707724 | 719..868 | 99 | -> | Minus |
arm_2R | 6707787..6708496 | 5..718 | 99 | | Minus |
BS03663.5prime Sequence
863 bp (811 high quality bases) assembled on 2005-12-01
> BS03663.5prime
GAAGTTATCAGTCGACATGGCTTTAGCTGAAATCTGCAAGATATCGAATG
CTCCGTACATGCGGCCCAATGCCTGGTCATCGGCGGATGTGGAGGAAGAG
CAAAAAGGGCTTATGTGCAATCTGGCCAATCCCTACACACTGGCTGCTCC
GCCATTCGAGAACCCCCTGCACAACCTTAATCAGATCCAGGCCAATGGCG
ACAAGACCGGCGTCAAAATCAACTTCGATCACGGCACCACAACGTTGGGC
TTCAAGTTCAAGGGCGGCGTTCTCCTGGCAGTCGATTCCCGTGCCACGGG
TGGATCGTACATTGGCTCCCAGTCGATGAAGAAGATCGTGGAGATCAATC
AGTTCATGCTGGGCACCTTGGCCGGTGGCGCAGCCGATTGCGTTTACTGG
GACAGGGTCCTTTCGAAGGAATGCCGCCTTCACGAGCTTCGAAACAAGGA
ACGCATCTCGGTGGCCGCCGCCAGCAAGATAATGGCCAACATTGCCCACG
AATACAAGGGAATGGGTCTGAGCATGGGCATGATGCTGGCCGGTTACGAT
AAGCGTGGTCCAGGCCTCTACTATGTGGACTCCGAGGGATCTCGCACGCC
TGGCAATTTGTTCTCTGTTGGTAGTGGATCGCTGTACGCCTACGGTGTCC
TGGACTCTGGCTATCATTGGGACCTGGAGGACAAGGAGGCCCAGGAGCTG
GGACGTCGCGCCATCTACCATGCCACCTTCAGGGATGCCTACTCCGGTGG
TATCATTCGCGTGTATCACATTAAGGAGGACGGCTGGGTAAACATCTCCA
ACACCGACTGCATGGAGCTGCACTACATGTACCAGGAGCAGTTGAAGCAG
CAGGCCGCTAAGT
BS03663.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:34:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12323-PB | 849 | Prosbeta5-RB | 1..847 | 17..863 | 4235 | 100 | Plus |
CG12323-PA | 849 | Prosbeta5-RA | 1..847 | 17..863 | 4235 | 100 | Plus |
CG31742-PA | 840 | CG31742-RA | 478..523 | 500..545 | 155 | 93.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 03:49:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta5-RA | 1139 | CG12323-RA | 96..942 | 17..863 | 4235 | 100 | Plus |
Prosbeta5-RB | 1076 | CG12323-RB | 33..879 | 17..863 | 4235 | 100 | Plus |
Prosbeta5R1-RA | 1107 | CG9868-RA | 373..609 | 307..543 | 255 | 74.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 03:49:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10820282..10820981 | 164..863 | 3500 | 100 | Plus |
2R | 25286936 | 2R | 10820073..10820219 | 17..163 | 735 | 100 | Plus |
2R | 25286936 | 2R | 23309152..23309388 | 543..307 | 255 | 73.8 | Minus |
2L | 23513712 | 2L | 17990976..17991021 | 500..545 | 185 | 93.5 | Plus |
Blast to na_te.dros performed on 2015-02-04 03:49:53 has no hits.
BS03663.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:29:36 Download gff for
BS03663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12323-PA | 1..847 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:45:18 Download gff for
BS03663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12323-PA | 1..847 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:04:28 Download gff for
BS03663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RB | 31..879 | 14..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:47:02 Download gff for
BS03663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RB | 31..879 | 14..863 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:47:02 Download gff for
BS03663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10820071..10820219 | 14..163 | 99 | -> | Plus |
2R | 10820282..10820981 | 164..863 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:04:28 Download gff for
BS03663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6707576..6707724 | 14..163 | 99 | -> | Plus |
arm_2R | 6707787..6708486 | 164..863 | 100 | | Plus |
BS03663.complete Sequence
881 bp (881 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ634743
> BS03663.complete
GAAGTTATCAGTCGACATGGCTTTAGCTGAAATCTGCAAGATATCGAATG
CTCCGTACATGCGGCCCAATGCCTGGTCATCGGCGGATGTGGAGGAAGAG
CAAAAAGGGCTTATGTGCAATCTGGCCAATCCCTACACACTGGCTGCTCC
GCCATTCGAGAACCCCCTGCACAACCTTAATCAGATCCAGGCCAATGGCG
ACAAGACCGGCGTCAAAATCAACTTCGATCACGGCACCACAACGTTGGGC
TTCAAGTTCAAGGGCGGCGTTCTCCTGGCAGTCGATTCCCGTGCCACGGG
TGGATCGTACATTGGCTCCCAGTCGATGAAGAAGATCGTGGAGATCAATC
AGTTCATGCTGGGCACCTTGGCCGGTGGCGCAGCCGATTGCGTTTACTGG
GACAGGGTCCTTTCGAAGGAATGCCGCCTTCACGAGCTTCGAAACAAGGA
ACGCATCTCGGTGGCCGCCGCCAGCAAGATAATGGCCAACATTGCCCACG
AATACAAGGGAATGGGTCTGAGCATGGGCATGATGCTGGCCGGTTACGAT
AAGCGTGGTCCAGGCCTCTACTATGTGGACTCCGAGGGATCTCGCACGCC
TGGCAATTTGTTCTCTGTTGGTAGTGGATCGCTGTACGCCTACGGTGTCC
TGGACTCTGGCTATCATTGGGACCTGGAGGACAAGGAGGCCCAGGAGCTG
GGACGTCGCGCCATCTACCATGCCACCTTCAGGGATGCCTACTCCGGTGG
TATCATTCGCGTGTATCACATTAAGGAGGACGGCTGGGTAAACATCTCCA
ACACCGACTGCATGGAGCTGCACTACATGTACCAGGAGCAGTTGAAGCAG
CAGGCCGCTAAGTAGAAGCTTTCTAGACCAT
BS03663.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:33:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta5-RA | 849 | CG12323-PA | 1..849 | 17..865 | 4245 | 100 | Plus |
Prosbeta5-RB | 849 | CG12323-PB | 1..849 | 17..865 | 4245 | 100 | Plus |
Prosbeta5R1-RA | 948 | CG9868-PA | 285..521 | 307..543 | 255 | 73.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:33:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta5-RA | 1139 | CG12323-RA | 96..945 | 17..866 | 4250 | 100 | Plus |
Prosbeta5-RB | 1076 | CG12323-RB | 33..882 | 17..866 | 4250 | 100 | Plus |
Prosbeta5R1-RA | 1107 | CG9868-RA | 373..609 | 307..543 | 255 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:33:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10820282..10820984 | 164..866 | 3515 | 100 | Plus |
2R | 25286936 | 2R | 10820073..10820219 | 17..163 | 735 | 100 | Plus |
2R | 25286936 | 2R | 23309152..23309388 | 543..307 | 255 | 73.8 | Minus |
2L | 23513712 | 2L | 17990976..17991021 | 500..545 | 185 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:33:02 has no hits.
BS03663.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:28:52 Download gff for
BS03663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RA | 1..849 | 17..865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:12:03 Download gff for
BS03663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RA | 91..949 | 14..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:30:01 Download gff for
BS03663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RB | 33..881 | 17..865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:28:52 Download gff for
BS03663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RA | 91..949 | 14..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:47:51 Download gff for
BS03663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta5-RB | 33..881 | 17..865 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:47:51 Download gff for
BS03663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10820073..10820219 | 17..163 | 100 | -> | Plus |
2R | 10820282..10820983 | 164..865 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:30:01 Download gff for
BS03663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6707578..6707724 | 17..163 | 100 | -> | Plus |
arm_2R | 6707787..6708488 | 164..865 | 100 | | Plus |
BS03663.pep Sequence
Translation from 16 to 864
> BS03663.pep
MALAEICKISNAPYMRPNAWSSADVEEEQKGLMCNLANPYTLAAPPFENP
LHNLNQIQANGDKTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGSYIG
SQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVA
AASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFS
VGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVY
HIKEDGWVNISNTDCMELHYMYQEQLKQQAAK*
BS03663.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta5-PA | 282 | CG12323-PA | 1..282 | 1..282 | 1493 | 100 | Plus |
Prosbeta5-PB | 282 | CG12323-PB | 1..282 | 1..282 | 1493 | 100 | Plus |
Prosbeta5R1-PA | 315 | CG9868-PA | 1..270 | 1..272 | 882 | 61.2 | Plus |
Prosbeta5R2-PB | 279 | CG31742-PB | 1..277 | 1..279 | 775 | 51.8 | Plus |
Prosbeta5R2-PA | 279 | CG31742-PA | 1..277 | 1..279 | 775 | 51.8 | Plus |