Clone Sequence Records
BS03687.3prime Sequence
666 bp (665 high quality bases) assembled on 2005-12-01
> BS03687.3prime
ATGGTCTAGAAAGCTTTTATTTAAATAAGTTCGCTTTGTAATACGCAAGC
TCTTTGATGCTTTCTCGGATGTCGTCCAGACTACGATGCGTGAAAGATTT
TTTGGGAGCGGAATCCAGAATTGCGGGATGCCATCGCTTGGCCAGTTCCT
TGATGGTGGACACATCGACGATGCGGTAATGCAGGTAAGCATCTACCAAT
GGCATGAATTTCATAATGAATAGTCGGTCGGTGTAGACGGAGTTCCCACC
AAGCGGACAGGCGCGCTTTGGTATGTTCTTCTCGAGATAGGATAGCACTA
GATTGGAGGCTTCTTCGAGATTCACATCCGAGCTCTTGCATCGATCAATA
AGACCTGAATTGTAATGATGTTTCATGCACCACTCGTTCATCGAGTCGTA
GACCTCCTGCGGATGGTTGATGGCAAAGCATGGTCCCTCCGACTTCACGT
TCAGGTCCTGGTCCGTAATGATGCAGGCCACCTCGAGGATTTTGTCCTTT
TCAATGTCCAGCCCGGTCATCTCCAAGTCCATCCACACGATGTCCGTGTC
TAAGCCACAGGTGCTGCTCATTCTGTCATTTGAATTGAATGCGATGTGGC
TCCGAATTTGGCGGTTCAGGGACAATCCGACGCGTCGAAGGTGAGCAAGC
ATGTCGACTGATAACT
BS03687.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:35:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-PA | 636 | CG10214-RA | 1..636 | 652..17 | 3180 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:29:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-RA | 970 | CG10214-RA | 91..727 | 652..16 | 3185 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:29:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23766762..23767398 | 16..652 | 3185 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 19:29:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 1376..1429 | 286..232 | 110 | 69.1 | Minus |
BS03687.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:30:14 Download gff for
BS03687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-PA | 1..636 | 17..652 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:46:07 Download gff for
BS03687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-PA | 1..636 | 17..652 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:22:38 Download gff for
BS03687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 82..729 | 11..660 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:40:42 Download gff for
BS03687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 82..729 | 11..660 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:40:42 Download gff for
BS03687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23766760..23767407 | 11..660 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:22:38 Download gff for
BS03687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19592482..19593129 | 11..660 | 98 | | Plus |
BS03687.5prime Sequence
666 bp (665 high quality bases) assembled on 2005-12-01
> BS03687.5prime
GAAGTTATCAGTCGACATGCTTGCTCACCTTCGACGCGTCGGATTGTCCC
TGAACCGCCAAATTCGGAGCCACATCGCATTCAATTCAAATGACAGAATG
AGCAGCACCTGTGGCTTAGACACGGACATCGTGTGGATGGACTTGGAGAT
GACCGGGCTGGACATTGAAAAGGACAAAATCCTCGAGGTGGCCTGCATCA
TTACGGACCAGGACCTGAACGTGAAGTCGGAGGGACCATGCTTTGCCATC
AACCATCCGCAGGAGGTCTACGACTCGATGAACGAGTGGTGCATGAAACA
TCATTACAATTCAGGTCTTATTGATCGATGCAAGAGCTCGGATGTGAATC
TCGAAGAAGCCTCCAATCTAGTGCTATCCTATCTCGAGAAGAACATACCA
AAGCGCGCCTGTCCGCTTGGTGGGAACTCCGTCTACACCGACCGACTATT
CATTATGAAATTCATGCCATTGGTAGATGCTTACCTGCATTACCGCATCG
TCGATGTGTCCACCATCAAGGAACTGGCCAAGCGATGGCATCCCGCAATT
CTGGATTCCGCTCCCAAAAAATCTTTCACGCATCGTAGTCTGGACGACAT
CCGAGAAAGCATCAAAGAGCTTGCGTATTACAAAGCGAACTTATTTAAAT
AAAAGCTTTCTAGACC
BS03687.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:35:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-PA | 636 | CG10214-RA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 02:19:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-RA | 970 | CG10214-RA | 91..727 | 17..653 | 3185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 02:19:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23766762..23767398 | 653..17 | 3185 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 02:19:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 1376..1429 | 383..437 | 110 | 69.1 | Plus |
BS03687.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:30:15 Download gff for
BS03687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-PA | 1..636 | 17..652 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:46:09 Download gff for
BS03687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-PA | 1..636 | 17..652 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:40:47 Download gff for
BS03687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 82..729 | 9..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:07:27 Download gff for
BS03687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 82..729 | 9..658 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:07:27 Download gff for
BS03687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23766760..23767407 | 9..658 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:40:47 Download gff for
BS03687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19592482..19593129 | 9..658 | 98 | | Minus |
BS03687.complete Sequence
668 bp (668 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ634756
> BS03687.complete
GAAGTTATCAGTCGACATGCTTGCTCACCTTCGACGCGTCGGATTGTCCC
TGAACCGCCAAATTCGGAGCCACATCGCATTCAATTCAAATGACAGAATG
AGCAGCACCTGTGGCTTAGACACGGACATCGTGTGGATGGACTTGGAGAT
GACCGGGCTGGACATTGAAAAGGACAAAATCCTCGAGGTGGCCTGCATCA
TTACGGACCAGGACCTGAACGTGAAGTCGGAGGGACCATGCTTTGCCATC
AACCATCCGCAGGAGGTCTACGACTCGATGAACGAGTGGTGCATGAAACA
TCATTACAATTCAGGTCTTATTGATCGATGCAAGAGCTCGGATGTGAATC
TCGAAGAAGCCTCCAATCTAGTGCTATCCTATCTCGAGAAGAACATACCA
AAGCGCGCCTGTCCGCTTGGTGGGAACTCCGTCTACACCGACCGACTATT
CATTATGAAATTCATGCCATTGGTAGATGCTTACCTGCATTACCGCATCG
TCGATGTGTCCACCATCAAGGAACTGGCCAAGCGATGGCATCCCGCAATT
CTGGATTCCGCTCCCAAAAAATCTTTCACGCATCGTAGTCTGGACGACAT
CCGAGAAAGCATCAAAGAGCTTGCGTATTACAAAGCGAACTTATTTAAAT
AAAAGCTTTCTAGACCAT
BS03687.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:57:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-RA | 636 | CG10214-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:57:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-RA | 970 | CG10214-RA | 91..727 | 17..653 | 3185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:57:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23766762..23767398 | 653..17 | 3185 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 19:57:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 1376..1429 | 383..437 | 110 | 69.1 | Plus |
BS03687.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:28:45 Download gff for
BS03687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 1..636 | 17..652 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:11:53 Download gff for
BS03687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 46..693 | 9..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:51 Download gff for
BS03687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 91..724 | 17..650 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:28:45 Download gff for
BS03687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 46..693 | 9..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:27 Download gff for
BS03687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 91..724 | 17..650 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:27 Download gff for
BS03687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23766765..23767398 | 17..650 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:51 Download gff for
BS03687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19592487..19593120 | 17..650 | 100 | | Minus |
BS03687.pep Sequence
Translation from 16 to 651
> BS03687.pep
MLAHLRRVGLSLNRQIRSHIAFNSNDRMSSTCGLDTDIVWMDLEMTGLDI
EKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHHYNSG
LIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFM
PLVDAYLHYRIVDVSTIKELAKRWHPAILDSAPKKSFTHRSLDDIRESIK
ELAYYKANLFK*
BS03687.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:21:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-PA | 211 | CG10214-PA | 1..211 | 1..211 | 1113 | 100 | Plus |