Clone Sequence Records
BS03696.3prime Sequence
552 bp (551 high quality bases) assembled on 2005-12-01
> BS03696.3prime
ATGGTCTAGAAAGCTTCTACGTATTTGTAGACGTTTTTCTTATTTTGTTG
ATATTCTTACGATAACATGTAAGACTACATAATGGAACATTTGTTGTTGA
ACAATTATATGTCTTGCGATTTTCACAACCGCTTACAAAGCACACCTGTG
AAGGAGGAGGTGTACGAGGGAGTTGAACTTTTAAAGGATATTCGTAACCT
GGGGGAACTATTACATAGTTGCCAGTTACAGCACTTATATAGGTTATTTT
TGGATAAGAGGGCTGTTGTAAAGACTTATTGCGAATTGAAATCCGATCCC
TGTTGGTTGCCTGTTTTTTTAACAACCGCTCCATTGTCTTTAATTTATCT
TTTTCTCTGCGTTCGTCAGCTTGTTGTTTTCGTTTTTGAGATTTCAGAAG
AGCTTTATGAATTTCCTCCGCAGTCTGCGGCTTTTCCTTTTCTTTATAAC
CACTTGGAAGAGCAATTAGCTCTTCTATAAATCCATTTATTTCGGAGTCC
TGTGTCCGTTCATAAATAGCACGTTGACGTGCTGTCATGTCGACTGATAA
CT
BS03696.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:35:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-PB | 834 | CG10395-RB | 313..834 | 538..17 | 2610 | 100 | Minus |
| CG10395-PA | 942 | CG10395-RA | 421..942 | 538..17 | 2610 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:48:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-RE | 1438 | CG10395-RE | 657..1179 | 538..16 | 2615 | 100 | Minus |
| CG10395-RD | 1175 | CG10395-RD | 394..916 | 538..16 | 2615 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5351191..5351713 | 538..16 | 2615 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:48:23 has no hits.
BS03696.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:30:29 Download gff for
BS03696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-PA | 421..942 | 17..538 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:46:29 Download gff for
BS03696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-PA | 421..942 | 17..538 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:30:06 Download gff for
BS03696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RA | 657..1182 | 10..538 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:09:09 Download gff for
BS03696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RD | 394..919 | 10..538 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:09:09 Download gff for
BS03696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5351191..5351716 | 10..538 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:30:06 Download gff for
BS03696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1238696..1239221 | 10..538 | 99 | | Minus |
BS03696.5prime Sequence
552 bp (551 high quality bases) assembled on 2005-11-29
> BS03696.5prime
GAAGTTATCAGTCGACATGACAGCACGTCAACGTGCTATTTATGAACGGA
CACAGGACTCCGAAATAAATGGATTTATAGAAGAGCTAATTGCTCTTCCA
AGTGGTTATAAAGAAAAGGAAAAGCCGCAGACTGCGGAGGAAATTCATAA
AGCTCTTCTGAAATCTCAAAAACGAAAACAACAAGCTGACGAACGCAGAG
AAAAAGATAAATTAAAGACAATGGAGCGGTTGTTAAAAAAACAGGCAACC
AACAGGGATCGGATTTCAATTCGCAATAAGTCTTTACAACAGCCCTCTTA
TCCAAAAATAACCTATATAAGTGCTGTAACTGGCAACTATGTAATAGTTC
CCCCAGGTTACGAATATCCTTTAAAAGTTCAACTCCCTCGTACACCTCCT
CCTTCACAGGTGTGCTTTGTAAGCGGTTGTGAAAATCGCAAGACATATAA
TTGTTCAACAACAAATGTTCCATTATGTAGTCTTACATGTTATCGTAAGA
ATATCAACAAAATAAGAAAAACGTCTACAAATACGTAGAAGCTTTCTAGA
CC
BS03696.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:35:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-PB | 834 | CG10395-RB | 313..834 | 17..538 | 2610 | 100 | Plus |
| CG10395-PA | 942 | CG10395-RA | 421..942 | 17..538 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:39:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-RE | 1438 | CG10395-RE | 657..1179 | 17..539 | 2615 | 100 | Plus |
| CG10395-RD | 1175 | CG10395-RD | 394..916 | 17..539 | 2615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:39:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5351191..5351713 | 17..539 | 2615 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:39:05 has no hits.
BS03696.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:30:30 Download gff for
BS03696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-PA | 421..942 | 17..538 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:46:30 Download gff for
BS03696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-PA | 421..942 | 17..538 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:09:26 Download gff for
BS03696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RA | 657..1182 | 17..545 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:58:39 Download gff for
BS03696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RD | 394..919 | 17..545 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:58:39 Download gff for
BS03696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5351191..5351716 | 17..545 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:09:26 Download gff for
BS03696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1238696..1239221 | 17..545 | 99 | | Plus |
BS03696.complete Sequence
554 bp (554 high quality bases) assembled on 2005-10-17
> BS03696.complete
GAAGTTATCAGTCGACATGACAGCACGTCAACGTGCTATTTATGAACGGA
CACAGGACTCCGAAATAAATGGATTTATAGAAGAGCTAATTGCTCTTCCA
AGTGGTTATAAAGAAAAGGAAAAGCCGCAGACTGCGGAGGAAATTCATAA
AGCTCTTCTGAAATCTCAAAAACGAAAACAACAAGCTGACGAACGCAGAG
AAAAAGATAAATTAAAGACAATGGAGCGGTTGTTAAAAAAACAGGCAACC
AACAGGGATCGGATTTCAATTCGCAATAAGTCTTTACAACAGCCCTCTTA
TCCAAAAATAACCTATATAAGTGCTGTAACTGGCAACTATGTAATAGTTC
CCCCAGGTTACGAATATCCTTTAAAAGTTCAACTCCCTCGTACACCTCCT
CCTTCACAGGTGTGCTTTGTAAGCGGTTGTGAAAATCGCAAGACATATAA
TTGTTCAACAACAAATGTTCCATTATGTAGTCTTACATGTTATCGTAAGA
ATATCAACAAAATAAGAAAAACGTCTACAAATACGTAGAAGCTTTCTAGA
CCAT
BS03696.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:06:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-RE | 846 | CG10395-PE | 325..846 | 17..538 | 2610 | 100 | Plus |
| CG10395-RD | 846 | CG10395-PD | 325..846 | 17..538 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:06:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-RE | 1438 | CG10395-RE | 657..1179 | 17..539 | 2615 | 100 | Plus |
| CG10395-RD | 1175 | CG10395-RD | 394..916 | 17..539 | 2615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:06:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5351191..5351713 | 17..539 | 2615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:06:44 has no hits.
BS03696.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:28:24 Download gff for
BS03696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RA | 421..942 | 17..538 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:11:29 Download gff for
BS03696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RA | 641..1166 | 17..545 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:17:59 Download gff for
BS03696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RA | 657..1178 | 17..538 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:28:24 Download gff for
BS03696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RA | 641..1166 | 17..545 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:26:28 Download gff for
BS03696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RD | 394..915 | 17..538 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:26:28 Download gff for
BS03696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5351191..5351712 | 17..538 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:17:59 Download gff for
BS03696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1238696..1239217 | 17..538 | 100 | | Plus |
BS03696.pep Sequence
Translation from 16 to 537
> BS03696.pep
MTARQRAIYERTQDSEINGFIEELIALPSGYKEKEKPQTAEEIHKALLKS
QKRKQQADERREKDKLKTMERLLKKQATNRDRISIRNKSLQQPSYPKITY
ISAVTGNYVIVPPGYEYPLKVQLPRTPPPSQVCFVSGCENRKTYNCSTTN
VPLCSLTCYRKNINKIRKTSTNT*
BS03696.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:22:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-PE | 281 | CG10395-PE | 109..281 | 1..173 | 900 | 100 | Plus |
| CG10395-PD | 281 | CG10395-PD | 109..281 | 1..173 | 900 | 100 | Plus |
