Clone Sequence Records
BS03756.3prime Sequence
591 bp (590 high quality bases) assembled on 2005-12-01
> BS03756.3prime
ATGGTCTAGAAAGCTTCTACTTATCGTTGCCATTGTCCTGCTCCACCGCC
TCCTTGGGATTCTCCTTCACATTGAGATGGGCGGGTCCCACCTGCTGGAT
CTGAACGATGCGCTCGTTGCCCTTATCCTCGATTGCCGGTGGCTTGGGCA
CCTTGATGGTCAGGACACCATCGGAGGACAAGGTGGAGGCCACCTTATCA
GCCTCATAACCGGGTGGCAGAGCATAGCGGCGGACAAAGTGACGAGTGAT
GAAGCCATGGTCATCTTCGCGCTCCTCATGGTTGCCCTCCACCAGGACGG
AGTTGTCCTGCACTTTGACCACCAGTTCGCTGGGCTTGAAGTGCGACACA
TCCATGCAGACCTGGAAGCCATCCTTTCCGATTTTCGACACGGCTCCCGA
CGATCCCGACGAGGCGCCCACCTGTTTCTCCAGCTGGCGCAGCTGCTGCT
CCATCGGTCCAACCAGGGCCAAGTAGGGATTCCTCTGGCGCTGGCAGTAG
TAGGGCTCATAGAAGGGCACCATCGACATTCGGCCCAAATCGTCGGCAAG
GCTCAACAACAATGGAATATTTGCCATGTCGACTGATAACT
BS03756.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:36:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4463-PA | 561 | Hsp23-RA | 1..561 | 577..17 | 2805 | 100 | Minus |
CG4466-PA | 642 | Hsp27-RA | 262..304 | 373..331 | 165 | 95.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:32:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp23-RB | 884 | CG4463-RB | 117..678 | 577..16 | 2810 | 100 | Minus |
Hsp23-RA | 849 | CG4463-RA | 117..678 | 577..16 | 2810 | 100 | Minus |
Hsp26-RB | 1010 | CG4183-RB | 495..807 | 376..64 | 350 | 74.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:32:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9381998..9382559 | 577..16 | 2810 | 100 | Minus |
3L | 28110227 | 3L | 9376621..9376933 | 64..376 | 335 | 73.8 | Plus |
3L | 28110227 | 3L | 9384447..9384590 | 373..230 | 315 | 81.2 | Minus |
Blast to na_te.dros performed on 2015-02-01 09:32:14 has no hits.
BS03756.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:32:01 Download gff for
BS03756.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-PA | 1..561 | 17..577 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:48:29 Download gff for
BS03756.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4463-PA | 1..561 | 17..577 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:36:54 Download gff for
BS03756.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 117..678 | 16..577 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 10:02:10 Download gff for
BS03756.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 117..678 | 16..577 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 10:02:10 Download gff for
BS03756.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9381998..9382559 | 16..577 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:36:54 Download gff for
BS03756.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9375098..9375659 | 16..577 | 100 | | Minus |
BS03756.5prime Sequence
591 bp (590 high quality bases) assembled on 2005-12-01
> BS03756.5prime
GAAGTTATCAGTCGACATGGCAAATATTCCATTGTTGTTGAGCCTTGCCG
ACGATTTGGGCCGAATGTCGATGGTGCCCTTCTATGAGCCCTACTACTGC
CAGCGCCAGAGGAATCCCTACTTGGCCCTGGTTGGACCGATGGAGCAGCA
GCTGCGCCAGCTGGAGAAACAGGTGGGCGCCTCGTCGGGATCGTCGGGAG
CCGTGTCGAAAATCGGAAAGGATGGCTTCCAGGTCTGCATGGATGTGTCG
CACTTCAAGCCCAGCGAACTGGTGGTCAAAGTGCAGGACAACTCCGTCCT
GGTGGAGGGCAACCATGAGGAGCGCGAAGATGACCATGGCTTCATCACTC
GTCACTTTGTCCGCCGCTATGCTCTGCCACCCGGTTATGAGGCTGATAAG
GTGGCCTCCACCTTGTCCTCCGATGGTGTCCTGACCATCAAGGTGCCCAA
GCCACCGGCAATCGAGGATAAGGGCAACGAGCGCATCGTTCAGATCCAGC
AGGTGGGACCCGCCCATCTCAATGTGAAGGAGAATCCCAAGGAGGCGGTG
GAGCAGGACAATGGCAACGATAAGTAGAAGCTTTCTAGACC
BS03756.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:36:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4463-PA | 561 | Hsp23-RA | 1..561 | 17..577 | 2805 | 100 | Plus |
CG4466-PA | 642 | Hsp27-RA | 262..304 | 221..263 | 165 | 95.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:09:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp23-RB | 884 | CG4463-RB | 117..678 | 17..578 | 2810 | 100 | Plus |
Hsp23-RA | 849 | CG4463-RA | 117..678 | 17..578 | 2810 | 100 | Plus |
Hsp26-RB | 1010 | CG4183-RB | 495..807 | 218..530 | 350 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:09:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9381998..9382559 | 17..578 | 2810 | 100 | Plus |
3L | 28110227 | 3L | 9376621..9376933 | 530..218 | 335 | 73.8 | Minus |
3L | 28110227 | 3L | 9384447..9384590 | 221..364 | 315 | 81.2 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:09:32 has no hits.
BS03756.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:32:02 Download gff for
BS03756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-PA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:48:31 Download gff for
BS03756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4463-PA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:45:39 Download gff for
BS03756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 117..678 | 17..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:03:11 Download gff for
BS03756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 117..678 | 17..578 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:03:11 Download gff for
BS03756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9381998..9382559 | 17..578 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:45:39 Download gff for
BS03756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9375098..9375659 | 17..578 | 100 | | Plus |
BS03756.complete Sequence
593 bp (593 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634763
> BS03756.complete
GAAGTTATCAGTCGACATGGCAAATATTCCATTGTTGTTGAGCCTTGCCG
ACGATTTGGGCCGAATGTCGATGGTGCCCTTCTATGAGCCCTACTACTGC
CAGCGCCAGAGGAATCCCTACTTGGCCCTGGTTGGACCGATGGAGCAGCA
GCTGCGCCAGCTGGAGAAACAGGTGGGCGCCTCGTCGGGATCGTCGGGAG
CCGTGTCGAAAATCGGAAAGGATGGCTTCCAGGTCTGCATGGATGTGTCG
CACTTCAAGCCCAGCGAACTGGTGGTCAAAGTGCAGGACAACTCCGTCCT
GGTGGAGGGCAACCATGAGGAGCGCGAAGATGACCATGGCTTCATCACTC
GTCACTTTGTCCGCCGCTATGCTCTGCCACCCGGTTATGAGGCTGATAAG
GTGGCCTCCACCTTGTCCTCCGATGGTGTCCTGACCATCAAGGTGCCCAA
GCCACCGGCAATCGAGGATAAGGGCAACGAGCGCATCGTTCAGATCCAGC
AGGTGGGACCCGCCCATCTCAATGTGAAGGAGAATCCCAAGGAGGCGGTG
GAGCAGGACAATGGCAACGATAAGTAGAAGCTTTCTAGACCAT
BS03756.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:58:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp23-RB | 561 | CG4463-PB | 1..561 | 17..577 | 2805 | 100 | Plus |
Hsp23-RA | 561 | CG4463-PA | 1..561 | 17..577 | 2805 | 100 | Plus |
Hsp26-RB | 627 | CG4183-PB | 256..568 | 218..530 | 335 | 73.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:58:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp23-RB | 884 | CG4463-RB | 117..678 | 17..578 | 2810 | 100 | Plus |
Hsp23-RA | 849 | CG4463-RA | 117..678 | 17..578 | 2810 | 100 | Plus |
Hsp26-RB | 1010 | CG4183-RB | 495..807 | 218..530 | 335 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:57:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9381998..9382559 | 17..578 | 2810 | 100 | Plus |
3L | 28110227 | 3L | 9376621..9376933 | 530..218 | 335 | 73.8 | Minus |
3L | 28110227 | 3L | 9384447..9384590 | 221..364 | 315 | 81.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:58:00 has no hits.
BS03756.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:59:58 Download gff for
BS03756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:36:52 Download gff for
BS03756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 115..676 | 17..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:35:17 Download gff for
BS03756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 117..677 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:59:58 Download gff for
BS03756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 115..676 | 17..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:41:20 Download gff for
BS03756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp23-RA | 117..677 | 17..577 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:41:20 Download gff for
BS03756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9381998..9382558 | 17..577 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:35:17 Download gff for
BS03756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9375098..9375658 | 17..577 | 100 | | Plus |
BS03756.pep Sequence
Translation from 16 to 576
> BS03756.pep
MANIPLLLSLADDLGRMSMVPFYEPYYCQRQRNPYLALVGPMEQQLRQLE
KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNH
EEREDDHGFITRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIE
DKGNERIVQIQQVGPAHLNVKENPKEAVEQDNGNDK*
BS03756.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:24:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp23-PB | 186 | CG4463-PB | 1..186 | 1..186 | 966 | 100 | Plus |
Hsp23-PA | 186 | CG4463-PA | 1..186 | 1..186 | 966 | 100 | Plus |
Hsp26-PB | 208 | CG4183-PB | 80..201 | 62..183 | 457 | 68.9 | Plus |
Hsp26-PA | 208 | CG4183-PA | 80..201 | 62..183 | 457 | 68.9 | Plus |
Hsp27-PB | 213 | CG4466-PB | 54..196 | 29..177 | 422 | 57 | Plus |