Clone Sequence Records
BS03785.3prime Sequence
708 bp (707 high quality bases) assembled on 2005-12-01
> BS03785.3prime
ATGGTCTAGAAAGCTTTTACTTCTGCTGTCGCTCAGCCAAAAGTCCCTTA
ACCAGTCCCACCAACATATCCAGACCTTCCTGATTGTTTTTCTGGTAGTA
TGGAAGGGCCTGAATGCGCTTGACCCACTGTACCAGGCGTGGAAACTGAT
CCGGCTCGATTGGCGCAAAAGCCTCGGCCGTGGACACCGATGCGATGCAG
CTGAGATCGGCGATGGTCAGCTTGTCGCCCACCAAGTAATCACCTTCAGC
CAGACAGTGCTCCAAGCCATCATAGGCCTTCTGAAGGTAGGCCACTCGAT
CGCTGGGCACCTCGCCAGCTCCGAAATAGATCACCGGCTCGACAATGAAA
CGGATTCGCGGGAATAGATGACCGCAATCGTAGTACAAACGGGCATCCAC
CAGGCGCCGCTTCTCCGGATCCTTTGGATACAGGGAATCATCGCCCTCCG
GTGCGTACTTATCTGCCAGATAGCTGCAGATAATGTGCGAATCGCTCACG
ATGGTGCCGTTATCATCGAGCACGGGGATCGTGTGCTGCGCATTCAACTT
GAGAAACTCGGCGGATTTGTGCTCTCCGGCCTTTACGTTGACCAGTCGCA
AGTCCAACTCCAAACCGAGGGCGGCGGCCGTCAGCAGAACAGCACGACAG
GGGGGACTACGGGGAGCGTAATAGAGGATGGGTTTGGCCGACATGTCGAC
TGATAACT
BS03785.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:36:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5224-PA | 678 | CG5224-RA | 1..678 | 694..17 | 3390 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 15:28:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE11-RB | 943 | CG5224-RB | 66..743 | 694..17 | 3390 | 100 | Minus |
GstE11-RA | 762 | CG5224-RA | 66..743 | 694..17 | 3390 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 15:28:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18504245..18504825 | 597..17 | 2905 | 100 | Minus |
2R | 25286936 | 2R | 18503752..18503849 | 694..597 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 15:28:08 has no hits.
BS03785.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:32:44 Download gff for
BS03785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5224-PA | 1..678 | 17..694 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:49:28 Download gff for
BS03785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5224-PA | 1..678 | 17..694 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:12:58 Download gff for
BS03785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE11-RA | 61..743 | 17..700 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 18:54:24 Download gff for
BS03785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE11-RA | 61..743 | 17..700 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 18:54:24 Download gff for
BS03785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18503747..18503849 | 597..700 | 97 | -> | Minus |
2R | 18504246..18504825 | 17..596 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:12:58 Download gff for
BS03785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14391252..14391354 | 597..700 | 97 | -> | Minus |
arm_2R | 14391751..14392330 | 17..596 | 100 | | Minus |
BS03785.5prime Sequence
708 bp (707 high quality bases) assembled on 2005-11-29
> BS03785.5prime
GAAGTTATCAGTCGACATGTCGGCCAAACCCATCCTCTATTACGCTCCCC
GTAGTCCCCCCTGTCGTGCTGTTCTGCTGACGGCCGCCGCCCTCGGTTTG
GAGTTGGACTTGCGACTGGTCAACGTAAAGGCCGGAGAGCACAAATCCGC
CGAGTTTCTCAAGTTGAATGCGCAGCACACGATCCCCGTGCTCGATGATA
ACGGCACCATCGTGAGCGATTCGCACATTATCTGCAGCTATCTGGCAGAT
AAGTACGCACCGGAGGGCGATGATTCCCTGTATCCAAAGGATCCGGAGAA
GCGGCGCCTGGTGGATGCCCGTTTGTACTACGATTGCGGTCATCTATTCC
CGCGAATCCGTTTCATTGTCGAGCCGGTGATCTATTTCGGAGCTGGCGAG
GTGCCCAGCGATCGAGTGGCCTACCTTCAGAAGGCCTATGATGGCTTGGA
GCACTGTCTGGCTGAAGGTGATTACTTGGTGGGCGACAAGCTGACCATCG
CCGATCTCAGCTGCATCGCATCGGTGTCCACGGCCGAGGCTTTTGCGCCA
ATCGAGCCGGATCAGTTTCCACGCCTGGTACAGTGGGTCAAGCGCATTCA
GGCCCTTCCATACTACCAGAAAAACAATCAGGAAGGTCTGGATATGTTGG
TGGGACTGGTTAAGGGACTTTTGGCTGAGCGACAGCAGAAGTAAAAGCTT
TCTAGACC
BS03785.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:36:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5224-PA | 678 | CG5224-RA | 1..678 | 17..694 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:23:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE11-RB | 943 | CG5224-RB | 66..743 | 17..694 | 3390 | 100 | Plus |
GstE11-RA | 762 | CG5224-RA | 66..743 | 17..694 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:23:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18504245..18504825 | 114..694 | 2905 | 100 | Plus |
2R | 25286936 | 2R | 18503752..18503849 | 17..114 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 08:23:54 has no hits.
BS03785.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:32:45 Download gff for
BS03785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5224-PA | 1..678 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:49:29 Download gff for
BS03785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5224-PA | 1..678 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:36:19 Download gff for
BS03785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE11-RA | 61..743 | 11..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:12:18 Download gff for
BS03785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE11-RA | 61..743 | 11..694 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:12:18 Download gff for
BS03785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18503747..18503849 | 11..114 | 97 | -> | Plus |
2R | 18504246..18504825 | 115..694 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:36:19 Download gff for
BS03785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14391252..14391354 | 11..114 | 97 | -> | Plus |
arm_2R | 14391751..14392330 | 115..694 | 100 | | Plus |
BS03785.complete Sequence
710 bp (710 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634765
> BS03785.complete
GAAGTTATCAGTCGACATGTCGGCCAAACCCATCCTCTATTACGCTCCCC
GTAGTCCCCCCTGTCGTGCTGTTCTGCTGACGGCCGCCGCCCTCGGTTTG
GAGTTGGACTTGCGACTGGTCAACGTAAAGGCCGGAGAGCACAAATCCGC
CGAGTTTCTCAAGTTGAATGCGCAGCACACGATCCCCGTGCTCGATGATA
ACGGCACCATCGTGAGCGATTCGCACATTATCTGCAGCTATCTGGCAGAT
AAGTACGCACCGGAGGGCGATGATTCCCTGTATCCAAAGGATCCGGAGAA
GCGGCGCCTGGTGGATGCCCGTTTGTACTACGATTGCGGTCATCTATTCC
CGCGAATCCGTTTCATTGTCGAGCCGGTGATCTATTTCGGAGCTGGCGAG
GTGCCCAGCGATCGAGTGGCCTACCTTCAGAAGGCCTATGATGGCTTGGA
GCACTGTCTGGCTGAAGGTGATTACTTGGTGGGCGACAAGCTGACCATCG
CCGATCTCAGCTGCATCGCATCGGTGTCCACGGCCGAGGCTTTTGCGCCA
ATCGAGCCGGATCAGTTTCCACGCCTGGTACAGTGGGTCAAGCGCATTCA
GGCCCTTCCATACTACCAGAAAAACAATCAGGAAGGTCTGGATATGTTGG
TGGGACTGGTTAAGGGACTTTTGGCTGAGCGACAGCAGAAGTAAAAGCTT
TCTAGACCAT
BS03785.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:50:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE11-RB | 678 | CG5224-PB | 1..678 | 17..694 | 3390 | 100 | Plus |
GstE11-RA | 678 | CG5224-PA | 1..678 | 17..694 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:50:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE11-RB | 943 | CG5224-RB | 66..743 | 17..694 | 3390 | 100 | Plus |
GstE11-RA | 762 | CG5224-RA | 66..743 | 17..694 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:50:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18504245..18504825 | 114..694 | 2905 | 100 | Plus |
2R | 25286936 | 2R | 18503752..18503849 | 17..114 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:50:23 has no hits.
BS03785.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:00:02 Download gff for
BS03785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5224-RA | 1..678 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:01 Download gff for
BS03785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5224-RA | 59..741 | 11..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:32:30 Download gff for
BS03785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE11-RA | 66..741 | 17..692 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:00:02 Download gff for
BS03785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5224-RA | 59..741 | 11..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:57 Download gff for
BS03785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE11-RA | 66..741 | 17..692 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:57 Download gff for
BS03785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18503752..18503849 | 17..114 | 100 | -> | Plus |
2R | 18504246..18504823 | 115..692 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:32:30 Download gff for
BS03785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14391257..14391354 | 17..114 | 100 | -> | Plus |
arm_2R | 14391751..14392328 | 115..692 | 100 | | Plus |
BS03785.pep Sequence
Translation from 16 to 693
> BS03785.pep
MSAKPILYYAPRSPPCRAVLLTAAALGLELDLRLVNVKAGEHKSAEFLKL
NAQHTIPVLDDNGTIVSDSHIICSYLADKYAPEGDDSLYPKDPEKRRLVD
ARLYYDCGHLFPRIRFIVEPVIYFGAGEVPSDRVAYLQKAYDGLEHCLAE
GDYLVGDKLTIADLSCIASVSTAEAFAPIEPDQFPRLVQWVKRIQALPYY
QKNNQEGLDMLVGLVKGLLAERQQK*
BS03785.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:24:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE11-PB | 225 | CG5224-PB | 1..225 | 1..225 | 1172 | 100 | Plus |
GstE11-PA | 225 | CG5224-PA | 1..225 | 1..225 | 1172 | 100 | Plus |
GstE12-PC | 223 | CG16936-PC | 2..223 | 3..225 | 566 | 49.3 | Plus |
GstE12-PB | 223 | CG16936-PB | 2..223 | 3..225 | 566 | 49.3 | Plus |
GstE12-PD | 223 | CG16936-PD | 2..223 | 3..225 | 566 | 49.3 | Plus |