Clone BS03785 Report

Search the DGRC for BS03785

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:37
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptGstE11-RA
Protein status:BS03785.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS03785.3prime Sequence

708 bp (707 high quality bases) assembled on 2005-12-01

> BS03785.3prime
ATGGTCTAGAAAGCTTTTACTTCTGCTGTCGCTCAGCCAAAAGTCCCTTA
ACCAGTCCCACCAACATATCCAGACCTTCCTGATTGTTTTTCTGGTAGTA
TGGAAGGGCCTGAATGCGCTTGACCCACTGTACCAGGCGTGGAAACTGAT
CCGGCTCGATTGGCGCAAAAGCCTCGGCCGTGGACACCGATGCGATGCAG
CTGAGATCGGCGATGGTCAGCTTGTCGCCCACCAAGTAATCACCTTCAGC
CAGACAGTGCTCCAAGCCATCATAGGCCTTCTGAAGGTAGGCCACTCGAT
CGCTGGGCACCTCGCCAGCTCCGAAATAGATCACCGGCTCGACAATGAAA
CGGATTCGCGGGAATAGATGACCGCAATCGTAGTACAAACGGGCATCCAC
CAGGCGCCGCTTCTCCGGATCCTTTGGATACAGGGAATCATCGCCCTCCG
GTGCGTACTTATCTGCCAGATAGCTGCAGATAATGTGCGAATCGCTCACG
ATGGTGCCGTTATCATCGAGCACGGGGATCGTGTGCTGCGCATTCAACTT
GAGAAACTCGGCGGATTTGTGCTCTCCGGCCTTTACGTTGACCAGTCGCA
AGTCCAACTCCAAACCGAGGGCGGCGGCCGTCAGCAGAACAGCACGACAG
GGGGGACTACGGGGAGCGTAATAGAGGATGGGTTTGGCCGACATGTCGAC
TGATAACT

BS03785.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:36:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG5224-PA 678 CG5224-RA 1..678 694..17 3390 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 15:28:11
Subject Length Description Subject Range Query Range Score Percent Strand
GstE11-RB 943 CG5224-RB 66..743 694..17 3390 100 Minus
GstE11-RA 762 CG5224-RA 66..743 694..17 3390 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 15:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18504245..18504825 597..17 2905 100 Minus
2R 25286936 2R 18503752..18503849 694..597 490 100 Minus
Blast to na_te.dros performed on 2015-02-06 15:28:08 has no hits.

BS03785.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:32:44 Download gff for BS03785.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5224-PA 1..678 17..694 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:49:28 Download gff for BS03785.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5224-PA 1..678 17..694 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:12:58 Download gff for BS03785.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE11-RA 61..743 17..700 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 18:54:24 Download gff for BS03785.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE11-RA 61..743 17..700 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 18:54:24 Download gff for BS03785.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 18503747..18503849 597..700 97 -> Minus
2R 18504246..18504825 17..596 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:12:58 Download gff for BS03785.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14391252..14391354 597..700 97 -> Minus
arm_2R 14391751..14392330 17..596 100   Minus

BS03785.5prime Sequence

708 bp (707 high quality bases) assembled on 2005-11-29

> BS03785.5prime
GAAGTTATCAGTCGACATGTCGGCCAAACCCATCCTCTATTACGCTCCCC
GTAGTCCCCCCTGTCGTGCTGTTCTGCTGACGGCCGCCGCCCTCGGTTTG
GAGTTGGACTTGCGACTGGTCAACGTAAAGGCCGGAGAGCACAAATCCGC
CGAGTTTCTCAAGTTGAATGCGCAGCACACGATCCCCGTGCTCGATGATA
ACGGCACCATCGTGAGCGATTCGCACATTATCTGCAGCTATCTGGCAGAT
AAGTACGCACCGGAGGGCGATGATTCCCTGTATCCAAAGGATCCGGAGAA
GCGGCGCCTGGTGGATGCCCGTTTGTACTACGATTGCGGTCATCTATTCC
CGCGAATCCGTTTCATTGTCGAGCCGGTGATCTATTTCGGAGCTGGCGAG
GTGCCCAGCGATCGAGTGGCCTACCTTCAGAAGGCCTATGATGGCTTGGA
GCACTGTCTGGCTGAAGGTGATTACTTGGTGGGCGACAAGCTGACCATCG
CCGATCTCAGCTGCATCGCATCGGTGTCCACGGCCGAGGCTTTTGCGCCA
ATCGAGCCGGATCAGTTTCCACGCCTGGTACAGTGGGTCAAGCGCATTCA
GGCCCTTCCATACTACCAGAAAAACAATCAGGAAGGTCTGGATATGTTGG
TGGGACTGGTTAAGGGACTTTTGGCTGAGCGACAGCAGAAGTAAAAGCTT
TCTAGACC

BS03785.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:36:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG5224-PA 678 CG5224-RA 1..678 17..694 3390 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:23:58
Subject Length Description Subject Range Query Range Score Percent Strand
GstE11-RB 943 CG5224-RB 66..743 17..694 3390 100 Plus
GstE11-RA 762 CG5224-RA 66..743 17..694 3390 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:23:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18504245..18504825 114..694 2905 100 Plus
2R 25286936 2R 18503752..18503849 17..114 490 100 Plus
Blast to na_te.dros performed on 2015-02-13 08:23:54 has no hits.

BS03785.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:32:45 Download gff for BS03785.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5224-PA 1..678 17..694 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:49:29 Download gff for BS03785.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5224-PA 1..678 17..694 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:36:19 Download gff for BS03785.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE11-RA 61..743 11..694 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:12:18 Download gff for BS03785.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE11-RA 61..743 11..694 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:12:18 Download gff for BS03785.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18503747..18503849 11..114 97 -> Plus
2R 18504246..18504825 115..694 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:36:19 Download gff for BS03785.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14391252..14391354 11..114 97 -> Plus
arm_2R 14391751..14392330 115..694 100   Plus

BS03785.complete Sequence

710 bp (710 high quality bases) assembled on 2006-02-02

GenBank Submission: FJ634765

> BS03785.complete
GAAGTTATCAGTCGACATGTCGGCCAAACCCATCCTCTATTACGCTCCCC
GTAGTCCCCCCTGTCGTGCTGTTCTGCTGACGGCCGCCGCCCTCGGTTTG
GAGTTGGACTTGCGACTGGTCAACGTAAAGGCCGGAGAGCACAAATCCGC
CGAGTTTCTCAAGTTGAATGCGCAGCACACGATCCCCGTGCTCGATGATA
ACGGCACCATCGTGAGCGATTCGCACATTATCTGCAGCTATCTGGCAGAT
AAGTACGCACCGGAGGGCGATGATTCCCTGTATCCAAAGGATCCGGAGAA
GCGGCGCCTGGTGGATGCCCGTTTGTACTACGATTGCGGTCATCTATTCC
CGCGAATCCGTTTCATTGTCGAGCCGGTGATCTATTTCGGAGCTGGCGAG
GTGCCCAGCGATCGAGTGGCCTACCTTCAGAAGGCCTATGATGGCTTGGA
GCACTGTCTGGCTGAAGGTGATTACTTGGTGGGCGACAAGCTGACCATCG
CCGATCTCAGCTGCATCGCATCGGTGTCCACGGCCGAGGCTTTTGCGCCA
ATCGAGCCGGATCAGTTTCCACGCCTGGTACAGTGGGTCAAGCGCATTCA
GGCCCTTCCATACTACCAGAAAAACAATCAGGAAGGTCTGGATATGTTGG
TGGGACTGGTTAAGGGACTTTTGGCTGAGCGACAGCAGAAGTAAAAGCTT
TCTAGACCAT

BS03785.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:50:24
Subject Length Description Subject Range Query Range Score Percent Strand
GstE11-RB 678 CG5224-PB 1..678 17..694 3390 100 Plus
GstE11-RA 678 CG5224-PA 1..678 17..694 3390 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:50:25
Subject Length Description Subject Range Query Range Score Percent Strand
GstE11-RB 943 CG5224-RB 66..743 17..694 3390 100 Plus
GstE11-RA 762 CG5224-RA 66..743 17..694 3390 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:50:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18504245..18504825 114..694 2905 100 Plus
2R 25286936 2R 18503752..18503849 17..114 490 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:50:23 has no hits.

BS03785.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:00:02 Download gff for BS03785.complete
Subject Subject Range Query Range Percent Splice Strand
CG5224-RA 1..678 17..694 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:01 Download gff for BS03785.complete
Subject Subject Range Query Range Percent Splice Strand
CG5224-RA 59..741 11..694 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:32:30 Download gff for BS03785.complete
Subject Subject Range Query Range Percent Splice Strand
GstE11-RA 66..741 17..692 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:00:02 Download gff for BS03785.complete
Subject Subject Range Query Range Percent Splice Strand
CG5224-RA 59..741 11..694 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:57 Download gff for BS03785.complete
Subject Subject Range Query Range Percent Splice Strand
GstE11-RA 66..741 17..692 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:57 Download gff for BS03785.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18503752..18503849 17..114 100 -> Plus
2R 18504246..18504823 115..692 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:32:30 Download gff for BS03785.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14391257..14391354 17..114 100 -> Plus
arm_2R 14391751..14392328 115..692 100   Plus

BS03785.pep Sequence

Translation from 16 to 693

> BS03785.pep
MSAKPILYYAPRSPPCRAVLLTAAALGLELDLRLVNVKAGEHKSAEFLKL
NAQHTIPVLDDNGTIVSDSHIICSYLADKYAPEGDDSLYPKDPEKRRLVD
ARLYYDCGHLFPRIRFIVEPVIYFGAGEVPSDRVAYLQKAYDGLEHCLAE
GDYLVGDKLTIADLSCIASVSTAEAFAPIEPDQFPRLVQWVKRIQALPYY
QKNNQEGLDMLVGLVKGLLAERQQK*

BS03785.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:24:41
Subject Length Description Subject Range Query Range Score Percent Strand
GstE11-PB 225 CG5224-PB 1..225 1..225 1172 100 Plus
GstE11-PA 225 CG5224-PA 1..225 1..225 1172 100 Plus
GstE12-PC 223 CG16936-PC 2..223 3..225 566 49.3 Plus
GstE12-PB 223 CG16936-PB 2..223 3..225 566 49.3 Plus
GstE12-PD 223 CG16936-PD 2..223 3..225 566 49.3 Plus