Clone Sequence Records
BS03803.3prime Sequence
657 bp (656 high quality bases) assembled on 2005-12-01
> BS03803.3prime
ATGGTCTAGAAAGCTTTTACTTGTCCTTGCCGTTGGGTGCTCCGTTCTCC
TTGCCCTTCACCTCGCTTTCATTTGCCTTAACGTTGAGGTGAGCGGGTCC
CACTTGCTGAATTTGAATGATGCGCTCCTTGGACTTGTCCTCGACGGCCT
GCGGCTTGGGAATACTGACGGTGAGCACGCCATCCGACGACAGCTGCGAG
ACCACTTGCTCCGCCTTGTAGCCATCGGGAACCTTGTAGCGGCGCACAAA
GTGGCGCATGATGTGACCATGGTCGTCCTGGCGTTCCTCATGCTTGCCCT
CGACCAAGATGGAGTCGTCCACCACCTTCACGTTGAGCTCACTGGGCTTG
AACTGGGCGACGTCCATGCACACCTGGAATCCATCCTTGCCCACATGGGC
GGTTGCCGGCCAGTGAATGTCGTTGCGGTTGGCCATCTCGCGCCGCAAAG
CCAAAACCTGGCCGGCGGGCGACGATGGGCATATCGGCGATGCGCAAGGG
CATCCGTTGATGGAACGGCGCTGCTGAGTGCCAAGGGGCAGCACGTAGCG
GGAATGCGGATGCAATCCCAGTCCAAGCTCGTAGATGGGGCTGCGGGGCT
CCTGGAGTTCATCCACAAGCGAAAGCAGAGTAGATAGCGACATGTCGACT
GATAACT
BS03803.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:37:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4183-PA | 627 | Hsp26-RA | 1..627 | 643..17 | 3135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:42:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-RB | 1010 | CG4183-RB | 240..867 | 643..16 | 3140 | 100 | Minus |
Hsp26-RA | 958 | CG4183-RA | 188..815 | 643..16 | 3140 | 100 | Minus |
Hsp23-RB | 884 | CG4463-RB | 318..630 | 388..76 | 350 | 74.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:42:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9376561..9377188 | 16..643 | 3140 | 100 | Plus |
3L | 28110227 | 3L | 9382199..9382511 | 388..76 | 335 | 73.8 | Minus |
3L | 28110227 | 3L | 9384438..9384590 | 394..242 | 330 | 81 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:42:08 has no hits.
BS03803.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:33:06 Download gff for
BS03803.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-PA | 1..627 | 17..643 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:49:54 Download gff for
BS03803.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4183-PA | 1..627 | 17..643 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:32:56 Download gff for
BS03803.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 182..824 | 9..649 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:02:22 Download gff for
BS03803.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 182..824 | 9..649 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:02:22 Download gff for
BS03803.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9376552..9377194 | 9..649 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:32:56 Download gff for
BS03803.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9369652..9370294 | 9..649 | 98 | | Plus |
BS03803.5prime Sequence
657 bp (656 high quality bases) assembled on 2005-11-29
> BS03803.5prime
GAAGTTATCAGTCGACATGTCGCTATCTACTCTGCTTTCGCTTGTGGATG
AACTCCAGGAGCCCCGCAGCCCCATCTACGAGCTTGGACTGGGATTGCAT
CCGCATTCCCGCTACGTGCTGCCCCTTGGCACTCAGCAGCGCCGTTCCAT
CAACGGATGCCCTTGCGCATCGCCGATATGCCCATCGTCGCCCGCCGGCC
AGGTTTTGGCTTTGCGGCGCGAGATGGCCAACCGCAACGACATTCACTGG
CCGGCAACCGCCCATGTGGGCAAGGATGGATTCCAGGTGTGCATGGACGT
CGCCCAGTTCAAGCCCAGTGAGCTCAACGTGAAGGTGGTGGACGACTCCA
TCTTGGTCGAGGGCAAGCATGAGGAACGCCAGGACGACCATGGTCACATC
ATGCGCCACTTTGTGCGCCGCTACAAGGTTCCCGATGGCTACAAGGCGGA
GCAAGTGGTCTCGCAGCTGTCGTCGGATGGCGTGCTCACCGTCAGTATTC
CCAAGCCGCAGGCCGTCGAGGACAAGTCCAAGGAGCGCATCATTCAAATT
CAGCAAGTGGGACCCGCTCACCTCAACGTTAAGGCAAATGAAAGCGAGGT
GAAGGGCAAGGAGAACGGAGCACCCAACGGCAAGGACAAGTAAAAGCTTT
CTAGACC
BS03803.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:37:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4183-PA | 627 | Hsp26-RA | 1..627 | 17..643 | 3135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:09:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-RB | 1010 | CG4183-RB | 240..867 | 17..644 | 3140 | 100 | Plus |
Hsp26-RA | 958 | CG4183-RA | 188..815 | 17..644 | 3140 | 100 | Plus |
Hsp23-RB | 884 | CG4463-RB | 318..630 | 272..584 | 350 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 12:09:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9376561..9377188 | 644..17 | 3140 | 100 | Minus |
3L | 28110227 | 3L | 9382199..9382511 | 272..584 | 335 | 73.8 | Plus |
3L | 28110227 | 3L | 9384438..9384590 | 266..418 | 330 | 81 | Plus |
Blast to na_te.dros performed on 2015-02-02 12:09:47 has no hits.
BS03803.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:33:07 Download gff for
BS03803.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-PA | 1..627 | 17..643 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:49:55 Download gff for
BS03803.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4183-PA | 1..627 | 17..643 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 13:56:50 Download gff for
BS03803.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 182..824 | 11..651 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:38:32 Download gff for
BS03803.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 182..824 | 11..651 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:38:32 Download gff for
BS03803.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9376552..9377194 | 11..651 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 13:56:50 Download gff for
BS03803.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9369652..9370294 | 11..651 | 98 | | Minus |
BS03803.complete Sequence
659 bp (659 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634770
> BS03803.complete
GAAGTTATCAGTCGACATGTCGCTATCTACTCTGCTTTCGCTTGTGGATG
AACTCCAGGAGCCCCGCAGCCCCATCTACGAGCTTGGACTGGGATTGCAT
CCGCATTCCCGCTACGTGCTGCCCCTTGGCACTCAGCAGCGCCGTTCCAT
CAACGGATGCCCTTGCGCATCGCCGATATGCCCATCGTCGCCCGCCGGCC
AGGTTTTGGCTTTGCGGCGCGAGATGGCCAACCGCAACGACATTCACTGG
CCGGCAACCGCCCATGTGGGCAAGGATGGATTCCAGGTGTGCATGGACGT
CGCCCAGTTCAAGCCCAGTGAGCTCAACGTGAAGGTGGTGGACGACTCCA
TCTTGGTCGAGGGCAAGCATGAGGAACGCCAGGACGACCATGGTCACATC
ATGCGCCACTTTGTGCGCCGCTACAAGGTTCCCGATGGCTACAAGGCGGA
GCAAGTGGTCTCGCAGCTGTCGTCGGATGGCGTGCTCACCGTCAGTATTC
CCAAGCCGCAGGCCGTCGAGGACAAGTCCAAGGAGCGCATCATTCAAATT
CAGCAAGTGGGACCCGCTCACCTCAACGTTAAGGCAAATGAAAGCGAGGT
GAAGGGCAAGGAGAACGGAGCACCCAACGGCAAGGACAAGTAAAAGCTTT
CTAGACCAT
BS03803.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:42:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-RB | 627 | CG4183-PB | 1..627 | 17..643 | 3135 | 100 | Plus |
Hsp26-RA | 627 | CG4183-PA | 1..627 | 17..643 | 3135 | 100 | Plus |
Hsp23-RB | 561 | CG4463-PB | 202..514 | 272..584 | 335 | 73.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:42:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-RB | 1010 | CG4183-RB | 240..867 | 17..644 | 3140 | 100 | Plus |
Hsp26-RA | 958 | CG4183-RA | 188..815 | 17..644 | 3140 | 100 | Plus |
Hsp23-RB | 884 | CG4463-RB | 318..630 | 272..584 | 335 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:42:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9376561..9377188 | 644..17 | 3140 | 100 | Minus |
3L | 28110227 | 3L | 9382199..9382511 | 272..584 | 335 | 73.8 | Plus |
3L | 28110227 | 3L | 9384438..9384590 | 266..418 | 330 | 81 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:42:27 has no hits.
BS03803.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:53:46 Download gff for
BS03803.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 1..627 | 17..643 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:29:30 Download gff for
BS03803.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 234..876 | 11..651 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:07 Download gff for
BS03803.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 188..812 | 17..641 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:53:46 Download gff for
BS03803.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 234..876 | 11..651 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:24:54 Download gff for
BS03803.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 188..812 | 17..641 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:24:54 Download gff for
BS03803.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9376564..9377188 | 17..641 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:07 Download gff for
BS03803.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9369664..9370288 | 17..641 | 100 | | Minus |
BS03803.pep Sequence
Translation from 16 to 642
> BS03803.pep
MSLSTLLSLVDELQEPRSPIYELGLGLHPHSRYVLPLGTQQRRSINGCPC
ASPICPSSPAGQVLALRREMANRNDIHWPATAHVGKDGFQVCMDVAQFKP
SELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYKAEQVVSQ
LSSDGVLTVSIPKPQAVEDKSKERIIQIQQVGPAHLNVKANESEVKGKEN
GAPNGKDK*
BS03803.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:48:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-PB | 208 | CG4183-PB | 1..208 | 1..208 | 1089 | 100 | Plus |
Hsp26-PA | 208 | CG4183-PA | 1..208 | 1..208 | 1089 | 100 | Plus |
Hsp23-PB | 186 | CG4463-PB | 62..183 | 80..201 | 457 | 68.9 | Plus |
Hsp23-PA | 186 | CG4463-PA | 62..183 | 80..201 | 457 | 68.9 | Plus |
Hsp27-PB | 213 | CG4466-PB | 1..205 | 1..202 | 396 | 47 | Plus |