Clone Sequence Records
BS03815.3prime Sequence
777 bp (750 high quality bases) assembled on 2005-12-01
> BS03815.3prime
ATGGTCTAGAAAGCTTCTACGTAGACTTTGGCGTTTCCTCATTCATCTGG
TTTTTAGCATGGACATCAAGAACTTGCACAAAACTGTTCTGATGGGCCTG
CAGTTGCTGAATAAGGTGGCCAGGTGCTTGACTAAGGGTCTGGACAAGTT
GTGCCTGGACCGCGTGCAGGCCGGGCATCTGAGCGTAGGCCACAAGCTGG
TTCCTACTCAGCATGGTCTCCTCCACGATGCCTCCCAGCAGGACCATTTG
CGGCACCCTGCGAACGATTCGTAGCAGTGCGGCAGTCTTTTCCGGGTCCG
GTGAGAAGACGATGCAATGATTGGAGTGGAACAGGGGCACAATCGCTTCG
TATCGAGTATTCTTCACCGCCTGTTCGATGATCTTGCTGCCGTAGGACTT
GAGGTGCAGGTTCTGCTTGTGAAGCTGAACGCGCACGCGGAAGATGTCAT
CGGCGGTTATAGAACTTAAGTGAAAGAAGGCAACCAGTCGGGAATGATCC
AGCCAATTCCGCACCTCTCGTGCGATGATTTCGTTGTATGGATTCTCCTG
CTGCTGTTGCGTGCGCTCCGCACGCGTTTTGAAGCAGCTCTTAGCTTTTG
GGAGTTCCGGATATTTCGGCTGCGTGACTGCGACTACCCGGGCCCGCTCG
TAGTGCGGTGCTTTCGGCCGCTGTATATTGATCTTACCCCTAAAGCGAAG
AAATTGTAGCGCAGGAGTACTGCTCTTAGCCAGGGAAAGGCTTCTTTGTA
TCAGGGTGGCCATGTCGACTGATAACT
BS03815.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11488-PA | 747 | mRpL10-RA | 1..747 | 763..17 | 3735 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL10-RA | 903 | CG11488-RA | 91..841 | 764..14 | 3755 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 203993..204720 | 741..14 | 3640 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 19:23:46 has no hits.
BS03815.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:33:29 Download gff for
BS03815.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11488-PA | 1..747 | 17..763 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:50:24 Download gff for
BS03815.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11488-PA | 1..747 | 17..763 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:19:19 Download gff for
BS03815.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 88..841 | 14..771 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:38:21 Download gff for
BS03815.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 88..841 | 14..771 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:38:21 Download gff for
BS03815.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 203993..204720 | 14..741 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:19:19 Download gff for
BS03815.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 203993..204720 | 14..741 | 100 | | Minus |
BS03815.5prime Sequence
777 bp (776 high quality bases) assembled on 2005-12-01
> BS03815.5prime
GAAGTTATCAGTCGACATGGCCACCCTGATACAAAGAAGCCTTTCCCTGG
CTAAGAGCAGTACTCCTGCGCTACAATTTCTTCGCTTTAGGGGTAAGATC
AATATACAGCGGCCGAAAGCACCGCACTACGAGCGGGCCCGGGTAGTCGC
AGTCACGCAGCCGAAATATCCGGAACTCCCAAAAGCTAAGAGCTGCTTCA
AAACGCGTGCGGAGCGCACGCAACAGCAGCAGGAGAATCCATACAACGAA
ATCATCGCACGAGAGGTGCGGAATTGGCTGGATCATTCCCGACTGGTTGC
CTTCTTTCACTTAAGTTCTATAACCGCCGATGACATCTTCCGCGTGCGCG
TTCAGCTTCACAAGCAGAACCTGCACCTCAAGTCCTACGGCAGCAAGATC
ATCGAACAGGCGGTGAAGAATACTCGATACGAAGCGATTGTGCCCCTGTT
CCACTCCAATCATTGCATCGTCTTCTCACCGGACCCGGAAAAGACTGCCG
CACTGCTACGAATCGTTCGCAGGGTGCCGCAAATGGTCCTGCTGGGAGGC
ATCGTGGAGGAGACCATGCTGAGTAGGAACCAGCTTGTGGCCTACGCTCA
GATGCCCGGCCTGCACGCGGTCCAGGCACAACTTGTCCAGACCCTTAGTC
AAGCACCTGGCCACCTTATTCAGCAACTGCAGGCCCATCAGAACAGTTTT
GTGCAAGTTCTTGATGTCCATGCTAAAAACCAGATGAATGAGGAAACGCC
AAAGTCTACGTAGAAGCTTTCTAGACC
BS03815.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11488-PA | 747 | mRpL10-RA | 1..747 | 17..763 | 3735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL10-RA | 903 | CG11488-RA | 91..841 | 16..766 | 3755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:03:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 203993..204720 | 39..766 | 3640 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 09:03:18 has no hits.
BS03815.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:33:30 Download gff for
BS03815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11488-PA | 1..747 | 17..763 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:50:25 Download gff for
BS03815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11488-PA | 1..747 | 17..763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:26:42 Download gff for
BS03815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 88..841 | 9..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:59:39 Download gff for
BS03815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 88..841 | 9..766 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:59:39 Download gff for
BS03815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 203993..204720 | 39..766 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:26:42 Download gff for
BS03815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 203993..204720 | 39..766 | 100 | | Plus |
BS03815.complete Sequence
779 bp (779 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634778
> BS03815.complete
GAAGTTATCAGTCGACATGGCCACCCTGATACAAAGAAGCCTTTCCCTGG
CTAAGAGCAGTACTCCTGCGCTACAATTTCTTCGCTTTAGGGGTAAGATC
AATATACAGCGGCCGAAAGCACCGCACTACGAGCGGGCCCGGGTAGTCGC
AGTCACGCAGCCGAAATATCCGGAACTCCCAAAAGCTAAGAGCTGCTTCA
AAACGCGTGCGGAGCGCACGCAACAGCAGCAGGAGAATCCATACAACGAA
ATCATCGCACGAGAGGTGCGGAATTGGCTGGATCATTCCCGACTGGTTGC
CTTCTTTCACTTAAGTTCTATAACCGCCGATGACATCTTCCGCGTGCGCG
TTCAGCTTCACAAGCAGAACCTGCACCTCAAGTCCTACGGCAGCAAGATC
ATCGAACAGGCGGTGAAGAATACTCGATACGAAGCGATTGTGCCCCTGTT
CCACTCCAATCATTGCATCGTCTTCTCACCGGACCCGGAAAAGACTGCCG
CACTGCTACGAATCGTTCGCAGGGTGCCGCAAATGGTCCTGCTGGGAGGC
ATCGTGGAGGAGACCATGCTGAGTAGGAACCAGCTTGTGGCCTACGCTCA
GATGCCCGGCCTGCACGCGGTCCAGGCACAACTTGTCCAGACCCTTAGTC
AAGCACCTGGCCACCTTATTCAGCAACTGCAGGCCCATCAGAACAGTTTT
GTGCAAGTTCTTGATGTCCATGCTAAAAACCAGATGAATGAGGAAACGCC
AAAGTCTACGTAGAAGCTTTCTAGACCAT
BS03815.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:08:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL10-RA | 747 | CG11488-PA | 1..747 | 17..763 | 3735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:08:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL10-RA | 903 | CG11488-RA | 91..841 | 16..766 | 3755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:08:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 203993..204720 | 39..766 | 3640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:08:31 has no hits.
BS03815.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:59:53 Download gff for
BS03815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 1..747 | 17..763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:36:46 Download gff for
BS03815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 83..836 | 9..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:48:06 Download gff for
BS03815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 92..838 | 17..763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:59:53 Download gff for
BS03815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 83..836 | 9..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:26 Download gff for
BS03815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL10-RA | 92..838 | 17..763 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:26 Download gff for
BS03815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 203870..203891 | 17..38 | 100 | -> | Plus |
| 2L | 203993..204717 | 39..763 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:48:06 Download gff for
BS03815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 203870..203891 | 17..38 | 100 | -> | Plus |
| arm_2L | 203993..204717 | 39..763 | 100 | | Plus |
BS03815.pep Sequence
Translation from 16 to 762
> BS03815.pep
MATLIQRSLSLAKSSTPALQFLRFRGKINIQRPKAPHYERARVVAVTQPK
YPELPKAKSCFKTRAERTQQQQENPYNEIIAREVRNWLDHSRLVAFFHLS
SITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFHSNHC
IVFSPDPEKTAALLRIVRRVPQMVLLGGIVEETMLSRNQLVAYAQMPGLH
AVQAQLVQTLSQAPGHLIQQLQAHQNSFVQVLDVHAKNQMNEETPKST*
BS03815.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL10-PA | 248 | CG11488-PA | 1..248 | 1..248 | 1261 | 100 | Plus |
