Clone Sequence Records
BS03827.5prime Sequence
396 bp (395 high quality bases) assembled on 2005-12-01
> BS03827.5prime
GAAGTTATCAGTCGACATGAACAATGATGACTTCAAGGTATCCGTGGAGC
TCTATTCAAGCCCCAATGGCGATGGGGAATTCAAGAGGATGGTCATGGAT
GTGCCGCAAACTAGCATTTGCGAGTGCTTCAAAAAGTTCTATGTCCAGTT
TGTGCAACCCTCTCTGAAGACTGGAGAAACCACAAATTTCCCCGTTGTCG
ACGATGACTTTTGCCCAGTGCCCGAAGGCGAATTCTACGTTAAGAACGTC
ATTTTGAATACGCAAGATTGGCCATCGCAGGTGCCTCGAGGGATTGTCAA
GGCCATTATAACATTCTTCAGTGGTGGCAAAAATGTTGGCGGCCTAATTG
TAGAAGTCAAAATTGAAGATCGACAAAGTTAGAAGCTTTCTAGACC
BS03827.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:37:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7313-PA | 555 | CheA75a-RA | 190..555 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA75a-RA | 699 | CG7313-RA | 190..556 | 17..383 | 1835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18252337..18252703 | 17..383 | 1835 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:23:48 has no hits.
BS03827.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:33:45 Download gff for
BS03827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7313-PA | 182..555 | 8..382 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:50:45 Download gff for
BS03827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7313-PA | 182..555 | 8..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:46:36 Download gff for
BS03827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 182..556 | 8..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:41:44 Download gff for
BS03827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 182..556 | 8..383 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:41:44 Download gff for
BS03827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18252329..18252703 | 8..383 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:46:36 Download gff for
BS03827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18245429..18245803 | 8..383 | 99 | | Plus |
BS03827.3prime Sequence
396 bp (395 high quality bases) assembled on 2005-12-01
> BS03827.3prime
ATGGTCTAGAAAGCTTCTAACTTTGTCGATCTTCAATTTTGACTTCTACA
ATTAGGCCGCCAACATTTTTGCCACCACTGAAGAATGTTATAATGGCCTT
GACAATCCCTCGAGGCACCTGCGATGGCCAATCTTGCGTATTCAAAATGA
CGTTCTTAACGTAGAATTCGCCTTCGGGCACTGGGCAAAAGTCATCGTCG
ACAACGGGGAAATTTGTGGTTTCTCCAGTCTTCAGAGAGGGTTGCACAAA
CTGGACATAGAACTTTTTGAAGCACTCGCAAATGCTAGTTTGCGGCACAT
CCATGACCATCCTCTTGAATTCCCCATCGCCATTGGGGCTTGAATAGAGC
TCCACGGATACCTTGAAGTCATCATTGTTCATGTCGACTGATAACT
BS03827.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:37:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7313-PA | 555 | CheA75a-RA | 190..555 | 382..17 | 1830 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:33:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA75a-RA | 699 | CG7313-RA | 190..556 | 382..16 | 1835 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 13:33:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18252337..18252703 | 382..16 | 1835 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 13:33:32 has no hits.
BS03827.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:33:44 Download gff for
BS03827.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7313-PA | 182..555 | 17..391 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:50:43 Download gff for
BS03827.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7313-PA | 182..555 | 17..391 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:54:08 Download gff for
BS03827.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 182..556 | 16..391 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 14:00:50 Download gff for
BS03827.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 182..556 | 16..391 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 14:00:50 Download gff for
BS03827.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18252329..18252703 | 16..391 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:54:08 Download gff for
BS03827.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18245429..18245803 | 16..391 | 99 | | Minus |
BS03827.complete Sequence
398 bp (398 high quality bases) assembled on 2006-02-02
> BS03827.complete
GAAGTTATCAGTCGACATGAACAATGATGACTTCAAGGTATCCGTGGAGC
TCTATTCAAGCCCCAATGGCGATGGGGAATTCAAGAGGATGGTCATGGAT
GTGCCGCAAACTAGCATTTGCGAGTGCTTCAAAAAGTTCTATGTCCAGTT
TGTGCAACCCTCTCTGAAGACTGGAGAAACCACAAATTTCCCCGTTGTCG
ACGATGACTTTTGCCCAGTGCCCGAAGGCGAATTCTACGTTAAGAACGTC
ATTTTGAATACGCAAGATTGGCCATCGCAGGTGCCTCGAGGGATTGTCAA
GGCCATTATAACATTCTTCAGTGGTGGCAAAAATGTTGGCGGCCTAATTG
TAGAAGTCAAAATTGAAGATCGACAAAGTTAGAAGCTTTCTAGACCAT
BS03827.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:44:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA75a-RA | 555 | CG7313-PA | 190..555 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA75a-RA | 699 | CG7313-RA | 190..556 | 17..383 | 1835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:44:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18252337..18252703 | 17..383 | 1835 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:44:10 has no hits.
BS03827.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:59:40 Download gff for
BS03827.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 182..555 | 8..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:36:29 Download gff for
BS03827.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 182..556 | 8..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:30:34 Download gff for
BS03827.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 190..555 | 17..382 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:59:41 Download gff for
BS03827.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 182..556 | 8..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:37:04 Download gff for
BS03827.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 190..555 | 17..382 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:37:04 Download gff for
BS03827.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18252337..18252702 | 17..382 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:30:34 Download gff for
BS03827.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18245437..18245802 | 17..382 | 100 | | Plus |
BS03827.pep Sequence
Translation from 16 to 381
> BS03827.pep
MNNDDFKVSVELYSSPNGDGEFKRMVMDVPQTSICECFKKFYVQFVQPSL
KTGETTNFPVVDDDFCPVPEGEFYVKNVILNTQDWPSQVPRGIVKAIITF
FSGGKNVGGLIVEVKIEDRQS*
BS03827.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA75a-PA | 184 | CG7313-PA | 64..184 | 1..121 | 644 | 100 | Plus |
| CheA84a-PA | 180 | CG33779-PA | 63..178 | 1..118 | 212 | 34.7 | Plus |
| CheA86a-PA | 189 | CG33698-PA | 64..180 | 1..119 | 205 | 33.6 | Plus |
| CheA56a-PA | 180 | CG33724-PA | 67..177 | 3..118 | 152 | 26.7 | Plus |
