Clone Sequence Records
BS03870.3prime Sequence
889 bp (813 high quality bases) assembled on 2005-12-01
> BS03870.3prime
ATGGTCTAGAAAGCTTTCAGACGACGTGGGTCAGATCGGTGGGCGGAGTG
ACGGGACGCGACATTTGCGACTTGTATACCTCCTCGTTGTCGTCCTCATT
CTCTGCGTGCGAGTCCTGAGAGTCGTGCGAGTCCTCGGAGTCTCTGCAGT
CCCTGGAATCCTCCACATCGGAGTCCTGGATGTCGTCGAGCGGCGTCGTT
GTGGTCATTGAAGCGGAAGCAGCTGCTGCCAGGAAGTGGACCTTAGCAGA
GGCCGTCGAGTTATTGTTGTCCGCCATTAGCTGGTGGTGCAGGTGGTGGC
TGTAGTTCAAGGAGGGCGGGATTCTGCCGGTGGAGCTGGTCTGCCGCCGC
AATAGGTTACCCACGTAGGCAGCTGTGATGGCGGCATAGGTCACTCCAAG
GAGGGCGCCGGCCAGGACGTCGGACCAGTGGTGCCAGTAGTCGGCTACGC
GGCTCAGGGAAACGCAGAGGGCAGCCATAAGGAGCAGGAACTGCAGGACG
TGCCGCAGGACTCGCACTCCCCCTCGTCCCCGCCACACCCCGTGTACGTA
GAGGGCCAGCAGGACCATCGAATAGAAGCTCAAGCTGCTGTGGGCACTCG
GGAAACTGACGTGCAACTCGCGGATCTGTCGCGTGGAGAGGTTGTTGTTA
GTGCAGTGGAACTGCTCCACGTACAGCTCAGCGTTCTGGAGGTCCGAGCA
GGAGCTGCCATCGTCGAGGCGCGGCTGGCAACCGTGGAAGAAGTGCGGCC
TCAGCCGCCCGACGGCGTGCTTCGCCAGCTCGGTGGTGAGATAGGTGGCT
ATGAAGCCGAAGCTGAAGGTGGCCTCTGCGCGCCACAGATTGCGGAAGTA
GAGCCTGGTGCGGAAGCGCTTGCAGATCCGCATGATCTC
BS03870.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:38:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11440-PA | 1005 | CG11440-RA | 133..1005 | 889..17 | 4365 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 14:38:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
laza-RA | 2316 | CG11440-RA | 706..1578 | 889..17 | 4365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 14:38:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22459554..22460426 | 17..889 | 4365 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 14:38:31 has no hits.
BS03870.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:34:47 Download gff for
BS03870.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11440-PA | 133..1005 | 17..889 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:52:06 Download gff for
BS03870.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11440-PA | 133..1005 | 17..889 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:19:48 Download gff for
BS03870.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 706..1578 | 17..889 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:37:31 Download gff for
BS03870.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 706..1578 | 17..889 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:37:31 Download gff for
BS03870.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22459554..22460426 | 17..889 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:19:48 Download gff for
BS03870.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22452654..22453526 | 17..889 | 100 | | Plus |
BS03870.5prime Sequence
876 bp (792 high quality bases) assembled on 2005-11-29
> BS03870.5prime
GAAGTTATCAGTCGACATGCACACTTTCAAAAGGGGCTTCTTTTGCTCTG
ATCTGAGCATACGGTATCCCTACAAGGACTGCACGATCACGGTGCCGATG
CTACTGCTCATGATGCTCCTGCTCCCGATGCTCTTCGTGGCCGTGGTGGA
GATCATGCGGATCTGCAAGCGCTTCCGCACCAGGCTCTACTTCCGCAATC
TGTGGCGCGCAGAGGCCACCTTCAGCTTCGGCTTCATAGCCACCTATCTC
ACCACCGAGCTGGCGAAGCACGCCGTCGGGCGGCTGAGGCCGCACTTCTT
CCACGGTTGCCAGCCGCGCCTCGACGATGGCAGCTCCTGCTCGGACCTCC
AGAACGCTGAGCTGTACGTGGAGCAGTTCCACTGCACTAACAACAACCTC
TCCACGCGACAGATCCGCGAGTTGCACGTCAGTTTCCCGAGTGCCCACAG
CAGCTTGAGCTTCTATTCGATGGTCCTGCTGGCCCTCTACGTACACGGGG
TGTGGCGGGGACGAGGGGGAGTGCGAGTCCTGCGGCACGTCCTGCAGTTC
CTGCTCCTTATGGCTGCCCTCTGCGTTTCCCTGAGCCGCGTAGCCGACTA
CTGGCACCACTGGTCCGACGTCCTGGCCGGCGCCCTCCTTGGAGTGACCT
ATGCCGCCATCACAGCTGCCTACGTGGGTAACCTATTGCGGCGGCAGACC
AGCTCCACCGGCAGAATCCCGCCCTCCTTGAACTACAGCCACCACCTGCA
CCACCAGCTAATGGCGGACAACAATAACTCGACGGCCTCTGCTAAGGTCC
ACTTCCTGGCAGCAGCTGCTTCCGCTTCAATGACCACAACGACGCCGCTC
GACGACATCCAGGACTCCGATGTGGA
BS03870.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:38:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11440-PA | 1005 | CG11440-RA | 1..860 | 17..876 | 4300 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:24:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
laza-RA | 2316 | CG11440-RA | 573..1433 | 16..876 | 4305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 04:24:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22459699..22460559 | 876..16 | 4305 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 04:24:48 has no hits.
BS03870.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:34:49 Download gff for
BS03870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11440-PA | 1..859 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:52:08 Download gff for
BS03870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11440-PA | 1..859 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:11:02 Download gff for
BS03870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 570..1432 | 10..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:51:44 Download gff for
BS03870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 570..1432 | 10..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:51:44 Download gff for
BS03870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22459700..22460562 | 10..875 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:11:02 Download gff for
BS03870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22452800..22453662 | 10..875 | 99 | | Minus |
BS03870.complete Sequence
1037 bp (1037 high quality bases) assembled on 2006-02-02
> BS03870.complete
GAAGTTATCAGTCGACATGCACACTTTCAAAAGGGGCTTCTTTTGCTCTG
ATCTGAGCATACGGTATCCCTACAAGGACTGCACGATCACGGTGCCGATG
CTACTGCTCATGATGCTCCTGCTCCCGATGCTCTTCGTGGCCGTGGTGGA
GATCATGCGGATCTGCAAGCGCTTCCGCACCAGGCTCTACTTCCGCAATC
TGTGGCGCGCAGAGGCCACCTTCAGCTTCGGCTTCATAGCCACCTATCTC
ACCACCGAGCTGGCGAAGCACGCCGTCGGGCGGCTGAGGCCGCACTTCTT
CCACGGTTGCCAGCCGCGCCTCGACGATGGCAGCTCCTGCTCGGACCTCC
AGAACGCTGAGCTGTACGTGGAGCAGTTCCACTGCACTAACAACAACCTC
TCCACGCGACAGATCCGCGAGTTGCACGTCAGTTTCCCGAGTGCCCACAG
CAGCTTGAGCTTCTATTCGATGGTCCTGCTGGCCCTCTACGTACACGGGG
TGTGGCGGGGACGAGGGGGAGTGCGAGTCCTGCGGCACGTCCTGCAGTTC
CTGCTCCTTATGGCTGCCCTCTGCGTTTCCCTGAGCCGCGTAGCCGACTA
CTGGCACCACTGGTCCGACGTCCTGGCCGGCGCCCTCCTTGGAGTGACCT
ATGCCGCCATCACAGCTGCCTACGTGGGTAACCTATTGCGGCGGCAGACC
AGCTCCACCGGCAGAATCCCGCCCTCCTTGAACTACAGCCACCACCTGCA
CCACCAGCTAATGGCGGACAACAATAACTCGACGGCCTCTGCTAAGGTCC
ACTTCCTGGCAGCAGCTGCTTCCGCTTCAATGACCACAACGACGCCGCTC
GACGACATCCAGGACTCCGATGTGGAGGATTCCAGGGACTGCAGAGACTC
CGAGGACTCGCACGACTCTCAGGACTCGCACGCAGAGAATGAGGACGACA
ACGAGGAGGTATACAAGTCGCAAATGTCGCGTCCCGTCACTCCGCCCACC
GATCTGACCCACGTCGTCTGAAAGCTTTCTAGACCAT
BS03870.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
laza-RA | 1005 | CG11440-PA | 1..1005 | 17..1021 | 5025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
laza-RA | 2316 | CG11440-RA | 573..1578 | 16..1021 | 5030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:33:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22459554..22460559 | 1021..16 | 5030 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:33:48 has no hits.
BS03870.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:59:18 Download gff for
BS03870.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 1..1005 | 17..1021 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:36:02 Download gff for
BS03870.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 622..1630 | 10..1021 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:08 Download gff for
BS03870.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 574..1577 | 17..1020 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:59:18 Download gff for
BS03870.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 622..1630 | 10..1021 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:30 Download gff for
BS03870.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laza-RA | 574..1577 | 17..1020 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:30 Download gff for
BS03870.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22459555..22460558 | 17..1020 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:08 Download gff for
BS03870.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22452655..22453658 | 17..1020 | 100 | | Minus |
BS03870.pep Sequence
Translation from 16 to 1020
> BS03870.pep
MHTFKRGFFCSDLSIRYPYKDCTITVPMLLLMMLLLPMLFVAVVEIMRIC
KRFRTRLYFRNLWRAEATFSFGFIATYLTTELAKHAVGRLRPHFFHGCQP
RLDDGSSCSDLQNAELYVEQFHCTNNNLSTRQIRELHVSFPSAHSSLSFY
SMVLLALYVHGVWRGRGGVRVLRHVLQFLLLMAALCVSLSRVADYWHHWS
DVLAGALLGVTYAAITAAYVGNLLRRQTSSTGRIPPSLNYSHHLHHQLMA
DNNNSTASAKVHFLAAAASASMTTTTPLDDIQDSDVEDSRDCRDSEDSHD
SQDSHAENEDDNEEVYKSQMSRPVTPPTDLTHVV*
BS03870.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:12:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
laza-PA | 334 | CG11440-PA | 1..334 | 1..334 | 1761 | 100 | Plus |
CG11426-PA | 340 | CG11426-PA | 63..291 | 5..223 | 498 | 43.5 | Plus |
CG11438-PB | 341 | CG11438-PB | 34..293 | 4..258 | 486 | 40.1 | Plus |
CG11438-PA | 341 | CG11438-PA | 34..293 | 4..258 | 486 | 40.1 | Plus |
wun-PA | 300 | CG8804-PA | 35..273 | 4..226 | 483 | 40.9 | Plus |