Clone Sequence Records
BS03928.5prime Sequence
459 bp (458 high quality bases) assembled on 2005-11-29
> BS03928.5prime
GAAGTTATCAGTCGACATGAAGTTCGCCGTTGCCGTAGTCATGTTCGTGT
GCGCCCTGGCTGGAGCTCATGCCTCGTGGGCCCAGATCGCTCCCGGTGTG
TCCTATGTGAGCCCCGTGGCCCATGGAGCCGGTCTGTGGAACGGAGCCTG
GAATGGTGCCTGGAACGGTGCCTGGAACGGCGCCTGGAACGGTGCTCCCT
GGGGTGCCCCTGCCGCCGTTGCCGTCCATGCCAGCGCTGCTCCCTGGGGT
CTGACCGGTGCCGGATGGCACGGCGCTGCTGTTCCCGGAATCAACCTGGC
CCAGGGACCCGGTCTCGCCGCCGGCCATGGCCATGAGGGCGTCTATGTGG
CCAAGACCCGTGGTGCCATCCACACCGCTCCCCTCGCCGGACACATCAAC
TCTGCCACCTCCGTGAACGTGGCCCCTGCCCCCGGAACTCTGTAAAAGCT
TTCTAGACC
BS03928.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:39:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-PA | 429 | CG7214-RA | 1..429 | 17..445 | 2145 | 100 | Plus |
CG7216-PA | 408 | Acp1-RA | 317..360 | 354..397 | 145 | 93.1 | Plus |
CG31904-PD | 1212 | CG31904-RD | 980..1023 | 354..397 | 145 | 93.1 | Plus |
CG31904-PB | 1212 | CG31904-RB | 980..1023 | 354..397 | 145 | 93.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:24:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 1041 | CG7214-RA | 85..515 | 15..445 | 2155 | 100 | Plus |
Acp1-RA | 858 | CG7216-RA | 369..416 | 350..397 | 180 | 91.7 | Plus |
CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 350..397 | 180 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:24:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7744208..7744632 | 445..21 | 2125 | 100 | Minus |
2L | 23513712 | 2L | 7734853..7734900 | 397..350 | 180 | 91.7 | Minus |
2L | 23513712 | 2L | 7741004..7741051 | 397..350 | 180 | 91.7 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:24:45 has no hits.
BS03928.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:36:02 Download gff for
BS03928.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-PA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:53:46 Download gff for
BS03928.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-PA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:42:06 Download gff for
BS03928.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..515 | 9..445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:42:57 Download gff for
BS03928.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..515 | 9..445 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:42:57 Download gff for
BS03928.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7744208..7744632 | 21..445 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:42:06 Download gff for
BS03928.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7744208..7744632 | 21..445 | 100 | | Minus |
BS03928.3prime Sequence
459 bp (458 high quality bases) assembled on 2005-12-01
> BS03928.3prime
ATGGTCTAGAAAGCTTTTACAGAGTTCCGGGGGCAGGGGCCACGTTCACG
GAGGTGGCAGAGTTGATGTGTCCGGCGAGGGGAGCGGTGTGGATGGCACC
ACGGGTCTTGGCCACATAGACGCCCTCATGGCCATGGCCGGCGGCGAGAC
CGGGTCCCTGGGCCAGGTTGATTCCGGGAACAGCAGCGCCGTGCCATCCG
GCACCGGTCAGACCCCAGGGAGCAGCGCTGGCATGGACGGCAACGGCGGC
AGGGGCACCCCAGGGAGCACCGTTCCAGGCGCCGTTCCAGGCACCGTTCC
AGGCACCATTCCAGGCTCCGTTCCACAGACCGGCTCCATGGGCCACGGGG
CTCACATAGGACACACCGGGAGCGATCTGGGCCCACGAGGCATGAGCTCC
AGCCAGGGCGCACACGAACATGACTACGGCAACGGCGAACTTCATGTCGA
CTGATAACT
BS03928.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:39:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-PA | 429 | CG7214-RA | 1..429 | 445..17 | 2145 | 100 | Minus |
CG7216-PA | 408 | Acp1-RA | 317..360 | 108..65 | 145 | 93.1 | Minus |
CG31904-PD | 1212 | CG31904-RD | 980..1023 | 108..65 | 145 | 93.1 | Minus |
CG31904-PB | 1212 | CG31904-RB | 980..1023 | 108..65 | 145 | 93.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:13:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 1041 | CG7214-RA | 85..515 | 447..17 | 2155 | 100 | Minus |
Acp1-RA | 858 | CG7216-RA | 369..416 | 112..65 | 180 | 91.7 | Minus |
CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 112..65 | 180 | 91.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:13:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7744208..7744632 | 17..441 | 2125 | 100 | Plus |
2L | 23513712 | 2L | 7734853..7734900 | 65..112 | 180 | 91.7 | Plus |
2L | 23513712 | 2L | 7741004..7741051 | 65..112 | 180 | 91.7 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:13:14 has no hits.
BS03928.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:36:01 Download gff for
BS03928.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-PA | 1..429 | 17..445 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:53:44 Download gff for
BS03928.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-PA | 1..429 | 17..445 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:44:57 Download gff for
BS03928.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..515 | 17..453 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:47:37 Download gff for
BS03928.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..515 | 17..453 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:47:37 Download gff for
BS03928.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7744208..7744632 | 17..441 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:44:57 Download gff for
BS03928.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7744208..7744632 | 17..441 | 100 | | Plus |
BS03928.complete Sequence
461 bp (461 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634820
> BS03928.complete
GAAGTTATCAGTCGACATGAAGTTCGCCGTTGCCGTAGTCATGTTCGTGT
GCGCCCTGGCTGGAGCTCATGCCTCGTGGGCCCAGATCGCTCCCGGTGTG
TCCTATGTGAGCCCCGTGGCCCATGGAGCCGGTCTGTGGAACGGAGCCTG
GAATGGTGCCTGGAACGGTGCCTGGAACGGCGCCTGGAACGGTGCTCCCT
GGGGTGCCCCTGCCGCCGTTGCCGTCCATGCCAGCGCTGCTCCCTGGGGT
CTGACCGGTGCCGGATGGCACGGCGCTGCTGTTCCCGGAATCAACCTGGC
CCAGGGACCCGGTCTCGCCGCCGGCCATGGCCATGAGGGCGTCTATGTGG
CCAAGACCCGTGGTGCCATCCACACCGCTCCCCTCGCCGGACACATCAAC
TCTGCCACCTCCGTGAACGTGGCCCCTGCCCCCGGAACTCTGTAAAAGCT
TTCTAGACCAT
BS03928.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 429 | CG7214-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Acp1-RA | 408 | CG7216-PA | 313..360 | 350..397 | 180 | 91.7 | Plus |
CG31904-RB | 1212 | CG31904-PB | 976..1023 | 350..397 | 180 | 91.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 1041 | CG7214-RA | 85..515 | 15..445 | 2155 | 100 | Plus |
Acp1-RA | 858 | CG7216-RA | 369..416 | 350..397 | 180 | 91.7 | Plus |
CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 350..397 | 180 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7744208..7744632 | 445..21 | 2125 | 100 | Minus |
2L | 23513712 | 2L | 7734853..7734900 | 397..350 | 180 | 91.7 | Minus |
2L | 23513712 | 2L | 7741004..7741051 | 397..350 | 180 | 91.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:00:17 has no hits.
BS03928.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:59:05 Download gff for
BS03928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:35:45 Download gff for
BS03928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 81..517 | 9..445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:53 Download gff for
BS03928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 87..513 | 17..443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:59:05 Download gff for
BS03928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 81..517 | 9..445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:59 Download gff for
BS03928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 87..513 | 17..443 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:59 Download gff for
BS03928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7744210..7744635 | 17..443 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:53 Download gff for
BS03928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7744210..7744635 | 17..443 | 99 | | Minus |
BS03928.pep Sequence
Translation from 16 to 444
> BS03928.pep
MKFAVAVVMFVCALAGAHASWAQIAPGVSYVSPVAHGAGLWNGAWNGAWN
GAWNGAWNGAPWGAPAAVAVHASAAPWGLTGAGWHGAAVPGINLAQGPGL
AAGHGHEGVYVAKTRGAIHTAPLAGHINSATSVNVAPAPGTL*
BS03928.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:34:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-PA | 142 | CG7214-PA | 1..142 | 1..142 | 783 | 100 | Plus |
Acp1-PA | 135 | CG7216-PA | 1..135 | 1..142 | 211 | 41.3 | Plus |
CG7203-PC | 129 | CG7203-PC | 1..128 | 1..141 | 164 | 36.7 | Plus |
CG7203-PB | 129 | CG7203-PB | 1..128 | 1..141 | 164 | 36.7 | Plus |
CG31904-PB | 403 | CG31904-PB | 224..341 | 3..127 | 147 | 37.7 | Plus |