Clone Sequence Records
BS04130.3prime Sequence
944 bp (813 high quality bases) assembled on 2005-12-01
> BS04130.3prime
ATGGTCTAGAAAGCTTTTACGTCAAGTCTTCATCCTCCTTGGTTGTGAAC
TGGAACACTTCGTAGTGATGGTTGAGTTCCCGCACCGAATGCAGTTGGAA
TCTCGTGGCTAGAGCTCCGTTTTCAGAGTTCTTAACGAAAAATACTCTTT
TCGCCCTGCTATGTACCAGGGCCATGGAGCACATAAGGCAGGGTTCCTGC
AGCAGATAGATATCGTAGCCGGTGCACAGATAGGGTCCGAATTTGGCCAG
GTTATCTGCTCCTTGAACTGCGTCCACTTCTTTGCATTCTCTCGACTTTT
CCGCTCCGAATGTCAGGTCTTTGTAGTCTTCATTGTTCATCAGGTAATCG
TAGTAGGCTTTAGGAATACCCCGCAGAGTGGTATCCTTCTTGAAATCTTC
GGTGAATGTAACCTCCGTTTTTGTGGCGCCTCCTTCTTGACTGCGAGCCA
CAAAATCGACGAGCATCATGCAGCAGTGCTCGTGCGGCCTACAAACTTCA
CCAGTTCCAGCAATGGACACAATGCTGGGTTGTCGCGGATCCACGCAGAT
GCCCACCGGACGATTGGCATTGACATCCCGCGAGAGCCTCACAAGCAATT
GCCCGATCCTTTTGTGAAATGTGCGTTGTGCGGAGCTAAAGTTGCTGCCA
TTCCTCAGTGACTCCGAGTAGTGATTAGGGTGAAACTTGCAGGGCCAGTG
CTTAAGGGTCTTCTCGTACTGCACCCGCAGTCGGGGCATCCGTTCCGGCA
CCTCCACCACCCGGACTCCCTGGCACAAAGCACGGAGCACGTGCTCCGAA
AAGGCAAACTGTTCAAGGTGTTGTTCCAGGCTTTGAGACACTCCGATCTC
TGAGCTGGGACATATGAGCACGCTGCGATCCTGGACGCGCTTTAGGTGTT
GAAAGTGGGGCAATTTCTGTGAGAGCTCCTGGATGACCGCCTGG
BS04130.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:42:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-PA | 1083 | CG10927-RA | 156..1083 | 944..17 | 4640 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:26:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 193..1120 | 944..17 | 4640 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:26:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613282..18614209 | 944..17 | 4640 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-02 19:26:54 has no hits.
BS04130.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:40:54 Download gff for
BS04130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 156..1083 | 17..944 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:00:00 Download gff for
BS04130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 156..1083 | 17..944 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:18:08 Download gff for
BS04130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 193..1125 | 10..944 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:59:35 Download gff for
BS04130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 193..1125 | 10..944 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:59:35 Download gff for
BS04130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613282..18614214 | 10..944 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:18:08 Download gff for
BS04130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500787..14501719 | 10..944 | 99 | | Minus |
BS04130.5prime Sequence
856 bp (782 high quality bases) assembled on 2005-11-29
> BS04130.5prime
GAAGTTATCAGTCGACATGGATATATCCGCGCCACCAAACAAACGTGCTC
GAAAATCACCCAATCTGGATGAAGACATAACTGGGATCCGGGCCATCCTC
TCCGATGAGTTCGACGAGGATATTGCGCTCATCAAGGCGCACAGTTGCGA
GTTGGAGACGAAACAGCAGCTCCAGGCGGTCATCCAGGAGCTCTCACAGA
AATTGCCCCACTTTCAACACCTAAAGCGCGTCCAGGATCGCAGCGTGCTC
ATATGTCCCAGCTCAGAGATCGGAGTGTCTCAAAGCCTGGAACAACACCT
TGAACAGTTTGCCTTTTCGGAGCACGTGCTCCGTGCTTTGTGCCAGGGAG
TCCGGGTGGTGGAGGTGCCGGAACGGATGCCCCGACTGCGGGTGCAGTAC
GAGAAGACCCTTAAGCACTGGCCCTGCAAGTTTCACCCTAATCACTACTC
GGAGTCACTGAGGAATGGCAGCAACTTTAGCTCCGCACAACGCACATTTC
ACAAAAGGATCGGGCAATTGCTTGTGAGGCTCTCGCGGGATGTCAATGCC
AATCGTCCGGTGGGCATCTGCGTGGATCCGCGACAACCCAGCATTGTGTC
CATTGCTGGAACTGGTGAAGTTTGTAGGCCGCACGAGCACTGCTGCATGA
TGCTCGTCGATTTTGTGGCTCGCAGTCAAGAAGGAGGCGCCACAAAAACG
GAGGTTACATTCACCGAAGATTTCAAGAAGGATACCACTCTGCGGGGTAT
TCCTAAAGCCTACTACGATTACCTGATGAACAATGAAGACTACAAAGACC
TGACATTCGGAGCGGAAAAGTCGAGAGAATGCAAAGAAGTGGACGCAGTT
CAAGGA
BS04130.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:42:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-PA | 1083 | CG10927-RA | 1..840 | 17..856 | 4200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:16:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 38..877 | 17..856 | 4200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:16:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613127..18613966 | 17..856 | 4200 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:16:53 has no hits.
BS04130.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:40:55 Download gff for
BS04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 1..839 | 17..855 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:00:01 Download gff for
BS04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 1..839 | 17..855 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:18:33 Download gff for
BS04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..876 | 17..855 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:29:37 Download gff for
BS04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..876 | 17..855 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:29:37 Download gff for
BS04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613127..18613965 | 17..855 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:18:33 Download gff for
BS04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500632..14501470 | 17..855 | 100 | | Plus |
BS04130.complete Sequence
1115 bp (1115 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634867
> BS04130.complete
GAAGTTATCAGTCGACATGGATATATCCGCGCCACCAAACAAACGTGCTC
GAAAATCACCCAATCTGGATGAAGACATAACTGGGATCCGGGCCATCCTC
TCCGATGAGTTCGACGAGGATATTGCGCTCATCAAGGCGCACAGTTGCGA
GTTGGAGACGAAACAGCAGCTCCAGGCGGTCATCCAGGAGCTCTCACAGA
AATTGCCCCACTTTCAACACCTAAAGCGCGTCCAGGATCGCAGCGTGCTC
ATATGTCCCAGCTCAGAGATCGGAGTGTCTCAAAGCCTGGAACAACACCT
TGAACAGTTTGCCTTTTCGGAGCACGTGCTCCGTGCTTTGTGCCAGGGAG
TCCGGGTGGTGGAGGTGCCGGAACGGATGCCCCGACTGCGGGTGCAGTAC
GAGAAGACCCTTAAGCACTGGCCCTGCAAGTTTCACCCTAATCACTACTC
GGAGTCACTGAGGAATGGCAGCAACTTTAGCTCCGCACAACGCACATTTC
ACAAAAGGATCGGGCAATTGCTTGTGAGGCTCTCGCGGGATGTCAATGCC
AATCGTCCGGTGGGCATCTGCGTGGATCCGCGACAACCCAGCATTGTGTC
CATTGCTGGAACTGGTGAAGTTTGTAGGCCGCACGAGCACTGCTGCATGA
TGCTCGTCGATTTTGTGGCTCGCAGTCAAGAAGGAGGCGCCACAAAAACG
GAGGTTACATTCACCGAAGATTTCAAGAAGGATACCACTCTGCGGGGTAT
TCCTAAAGCCTACTACGATTACCTGATGAACAATGAAGACTACAAAGACC
TGACATTCGGAGCGGAAAAGTCGAGAGAATGCAAAGAAGTGGACGCAGTT
CAAGGAGCAGATAACCTGGCCAAATTCGGACCCTATCTGTGCACCGGCTA
CGATATCTATCTGCTGCAGGAACCCTGCCTTATGTGCTCCATGGCCCTGG
TACATAGCAGGGCGAAAAGAGTATTTTTCGTTAAGAACTCTGAAAACGGA
GCTCTAGCCACGAGATTCCAACTGCATTCGGTGCGGGAACTCAACCATCA
CTACGAAGTGTTCCAGTTCACAACCAAGGAGGATGAAGACTTGACGTAAA
AGCTTTCTAGACCAT
BS04130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1083 | CG10927-PA | 1..1083 | 17..1099 | 5415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 38..1120 | 17..1099 | 5415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:49:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613127..18614209 | 17..1099 | 5415 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:49:58 has no hits.
BS04130.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:58:22 Download gff for
BS04130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 1..1083 | 17..1099 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:34:54 Download gff for
BS04130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 46..1133 | 17..1106 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:07 Download gff for
BS04130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..1118 | 17..1097 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:53 Download gff for
BS04130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..1118 | 17..1097 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:53 Download gff for
BS04130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613127..18614207 | 17..1097 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:07 Download gff for
BS04130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500632..14501712 | 17..1097 | 100 | | Plus |
BS04130.pep Sequence
Translation from 16 to 1098
> BS04130.pep
MDISAPPNKRARKSPNLDEDITGIRAILSDEFDEDIALIKAHSCELETKQ
QLQAVIQELSQKLPHFQHLKRVQDRSVLICPSSEIGVSQSLEQHLEQFAF
SEHVLRALCQGVRVVEVPERMPRLRVQYEKTLKHWPCKFHPNHYSESLRN
GSNFSSAQRTFHKRIGQLLVRLSRDVNANRPVGICVDPRQPSIVSIAGTG
EVCRPHEHCCMMLVDFVARSQEGGATKTEVTFTEDFKKDTTLRGIPKAYY
DYLMNNEDYKDLTFGAEKSRECKEVDAVQGADNLAKFGPYLCTGYDIYLL
QEPCLMCSMALVHSRAKRVFFVKNSENGALATRFQLHSVRELNHHYEVFQ
FTTKEDEDLT*
BS04130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:35:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-PA | 360 | CG10927-PA | 1..360 | 1..360 | 1896 | 100 | Plus |
