Clone Sequence Records
BS04273.3prime Sequence
946 bp (828 high quality bases) assembled on 2005-12-01
> BS04273.3prime
ATGGTCTAGAAAGCTTTTAATTCCGCTTGGCTTTCTGCTTTGGCTTGGAA
GTGTCCTTCTTAATAAATAATTCCTGCAGGAGTCGCCACACTAAACGGAT
CAGCAGGAAAATACAATAGAGCACGAATATAATGCCGCCATATAGTATCA
GCATTGCGTCCAGATTGTGGTATTGAATGAAATTCAGATCCTGGGAGGCG
CTCCTTAGATACTTGGCACCCTTATGCCGGGACACATGCTCCACCCAATA
AACGGCCCGCTCCAAAGGAGTCTGCTGCTGATCGCGATATCTGTCGGACA
TGTCGCGCACCCTCTGGGTGGCTTCGGGATTGTTGATTATTTTCTGAATC
GCAGCCAAAAGCTTGGCAGAACTCAATTCCTCGTAATGAACAGTCACCCC
GTAGCCATTCTGCTCGGCACGAGCCATGTTCAGGAACTGATCGCCAAAGA
TTGGAATGCCCACGAAGGGTTTGCGATGGTAAATGGACTCCGTGGTACTG
AGCAGACCGCCGTGCGTAATAAAGGCCAGCACATTGTCATGGGCCAGGAT
GTCGTCCTGAGGGAACCAGTCCGAGATGAACACATTGGCGGGCTTTCCGG
GCAGATCCGTGTCCTCGAACTTCCACAGCACACGCTGCTTCAGCTGGGCA
AAGGTGTCGATCAGCGCCTGGCGTTTTTCCAACGGCAGTGTTTTGCTCTT
CAGATTGGAGCCCATCGAGAAGTAGATAACTCCATGCTCGGCACCCTCAA
TGAACTCCAGAATGTCCTTGGGCAGCGGCTGGCGCTTTCGATTGATGTGC
ATGCCGCCCACCTCGATCATATTGGGTGAGTAGGGTCGTGGAAAACTGAG
CGATACATGTTGATTGAGCAGCACCAGAGCCGTGTTCTTGCGCATATCGT
AAAAGTCCTGCTTTTGTATGGGGAAGTACTTGCGGTAGAGGACCTC
BS04273.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18578-PA | 1587 | Ugt86Da-RA | 691..1587 | 913..17 | 4485 | 100 | Minus |
CG4739-PA | 1566 | Ugt86Dc-RA | 1345..1439 | 253..159 | 200 | 88.4 | Minus |
CG18578-PA | 1587 | Ugt86Da-RA | 658..685 | 946..919 | 140 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:38:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Da-RA | 1994 | CG18578-RA | 801..1730 | 946..17 | 4590 | 99.7 | Minus |
Ugt86Dc-RA | 1595 | CG4739-RA | 687..1221 | 937..405 | 475 | 73.9 | Minus |
Ugt86Dc-RA | 1595 | CG4739-RA | 1337..1468 | 290..159 | 345 | 84.1 | Minus |
Ugt86Di-RB | 2556 | CG6658-RB | 1056..1240 | 586..402 | 250 | 77 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:38:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11158551..11159480 | 946..17 | 4590 | 99.6 | Minus |
3R | 32079331 | 3R | 11155605..11156134 | 937..411 | 380 | 71.9 | Minus |
3R | 32079331 | 3R | 11156255..11156386 | 290..159 | 345 | 84.1 | Minus |
3R | 32079331 | 3R | 11152342..11152526 | 402..586 | 250 | 75.7 | Plus |
3R | 32079331 | 3R | 11152734..11152816 | 794..876 | 220 | 84.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:38:17 has no hits.
BS04273.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:44:21 Download gff for
BS04273.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18578-PA | 658..1587 | 17..946 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:04:27 Download gff for
BS04273.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18578-PA | 658..1587 | 17..946 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:02:49 Download gff for
BS04273.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 801..1733 | 12..946 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:53:07 Download gff for
BS04273.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 801..1733 | 12..946 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:53:07 Download gff for
BS04273.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11158551..11159486 | 15..946 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:02:49 Download gff for
BS04273.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6984273..6985208 | 15..946 | 99 | -> | Minus |
BS04273.5prime Sequence
917 bp (805 high quality bases) assembled on 2005-12-01
> BS04273.5prime
GAAGTTATCAGTCGACATGAAACCAACAGCTGGCCAAACGGGTTTTCTGG
CCCTACTGCTGTTCTGCCTGCTGAGCTGCGTGTCTGCCTACAACTACCTG
GTGGTGCTCCATACCGCCGCACGATCCCATTACCATGTGGGATCTGCCCT
GGCCAAGGGATTAGCCGCTGCGGGACATCAGGTGACCATCATCTCCCCCT
TCGAGCTGAAGAAACCCATCAAGAACATCAAAGATGTTCCGGCCAAGAGC
ATTCTGACTTCCATGCAGGGAAGAATTGCTAACCTTTTGCAAAGCTCAAA
GGAGCCCATAATCAAGCAGATCATTAACTTTCACGAAATGGGTATTGAAA
TAACCGAATTGCTGCTGAAGGAACCATCTGTGATAGAACTGATGAAATCC
AACCAGACCTTCGATGCCGTAATATCCGAGGTGTTCCTGAACGAAGCTCA
CTTCGGATTCGCCGAGCATTTCAAGGCTCCACTTATAGGACTGGGCACCT
TTGGAGCTATTAGCTGGAACACCGATCTGGTGGGATCTCCTTCACCGCCC
TCGTATGTTCCCAGTGCACTGCTGAAGTTTAGTGACCGCATGTCCCTCGT
AGAGCGAGTGGGCAACCAGGCCTTCCTCACCTACGAATATATCTTCCTCA
ACTACTTCTATCTGCCGCGCCAGGAGGTCCTCTACCGCAAGTACTTCCCC
AATAACAAGCAGGACTTTTACGATATGCGCAAGAACACGGCTCTGGTGCT
GCTCAATCAACATGTATCGCTCAGTTTTCCACGACCCTACTCACCCAATA
TGATCGAGGTGGGCGGCATGCACATCAATCGAAAGCGCCAGCCGCTGCCC
AAGGACATTCTGGAGTTCATTGAGGGTGCCGAGCATGGAGTTATCTACTT
CTCGATGGGCTCCCATC
BS04273.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18578-PA | 1587 | Ugt86Da-RA | 1..897 | 17..913 | 4485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:07:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Da-RA | 1994 | CG18578-RA | 144..1044 | 17..917 | 4490 | 99.9 | Plus |
Ugt86Dc-RA | 1595 | CG4739-RA | 687..924 | 683..917 | 345 | 77.4 | Plus |
Ugt86Di-RB | 2556 | CG6658-RB | 766..848 | 744..826 | 220 | 84.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:07:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11158406..11158794 | 529..917 | 1930 | 99.7 | Plus |
3R | 32079331 | 3R | 11158077..11158342 | 269..534 | 1330 | 100 | Plus |
3R | 32079331 | 3R | 11157241..11157494 | 17..270 | 1270 | 100 | Plus |
3R | 32079331 | 3R | 11155605..11155842 | 683..917 | 300 | 76.1 | Plus |
3R | 32079331 | 3R | 11152734..11152816 | 826..744 | 220 | 84.3 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:07:38 has no hits.
BS04273.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:44:22 Download gff for
BS04273.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18578-PA | 1..901 | 17..917 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:04:29 Download gff for
BS04273.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18578-PA | 1..901 | 17..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:32:48 Download gff for
BS04273.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 144..1044 | 17..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:42:01 Download gff for
BS04273.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 144..1044 | 17..917 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:42:01 Download gff for
BS04273.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11157241..11157493 | 17..269 | 100 | -> | Plus |
3R | 11158078..11158337 | 270..529 | 100 | -> | Plus |
3R | 11158407..11158794 | 530..917 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:32:48 Download gff for
BS04273.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6982963..6983215 | 17..269 | 100 | -> | Plus |
arm_3R | 6983800..6984059 | 270..529 | 100 | -> | Plus |
arm_3R | 6984129..6984516 | 530..917 | 99 | | Plus |
BS04273.complete Sequence
1619 bp (1619 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634908
> BS04273.complete
GAAGTTATCAGTCGACATGAAACCAACAGCTGGCCAAACGGGTTTTCTGG
CCCTACTGCTGTTCTGCCTGCTGAGCTGCGTGTCTGCCTACAACTACCTG
GTGGTGCTCCATACCGCCGCACGATCCCATTACCATGTGGGATCTGCCCT
GGCCAAGGGATTAGCCGCTGCGGGACATCAGGTGACCATCATCTCCCCCT
TCGAGCTGAAGAAACCCATCAAGAACATCAAAGATGTTCCGGCCAAGAGC
ATTCTGACTTCCATGCAGGGAAGAATTGCTAACCTTTTGCAAAGCTCAAA
GGAGCCCATAATCAAGCAGATCATTAACTTTCACGAAATGGGTATTGAAA
TAACCGAATTGCTGCTGAAGGAACCATCTGTGATAGAACTGATGAAATCC
AACCAGACCTTCGATGCCGTAATATCCGAGGTGTTCCTGAACGAAGCTCA
CTTCGGATTCGCCGAGCATTTCAAGGCTCCACTTATAGGACTGGGCACCT
TTGGAGCTATTAGCTGGAACACCGATCTGGTGGGATCTCCTTCACCGCCC
TCGTATGTTCCCAGTGCACTGCTGAAGTTTAGTGACCGCATGTCCCTCGT
AGAGCGAGTGGGCAACCAGGCCTTCCTCACCTACGAATATATCTTCCTCA
ACTACTTCTATCTGCCGCGCCAGGAGGTCCTCTACCGCAAGTACTTCCCC
AATAACAAGCAGGACTTTTACGATATGCGCAAGAACACGGCTCTGGTGCT
GCTCAATCAACATGTATCGCTCAGTTTTCCACGACCCTACTCACCCAATA
TGATCGAGGTGGGCGGCATGCACATCAATCGAAAGCGCCAGCCGCTGCCC
AAGGACATTCTGGAGTTCATTGAGGGTGCCGAGCATGGAGTTATCTACTT
CTCGATGGGCTCCAATCTGAAGAGCAAAACACTGCCGTTGGAAAAACGCC
AGGCGCTGATCGACACCTTTGCCCAGCTGAAGCAGCGTGTGCTGTGGAAG
TTCGAGGACACGGATCTGCCCGGAAAGCCCGCCAATGTGTTCATCTCGGA
CTGGTTCCCTCAGGACGACATCCTGGCCCATGACAATGTGCTGGCCTTTA
TTACGCACGGCGGTCTGCTCAGTACCACGGAGTCCATTTACCATCGCAAA
CCCTTCGTGGGCATTCCAATCTTTGGCGATCAGTTCCTGAACATGGCTCG
TGCCGAGCAGAATGGCTACGGGGTGACTGTTCATTACGAGGAATTGAGTT
CTGCCAAGCTTTTGGCTGCGATTCAGAAAATAATCAACAATCCCGAAGCC
ACCCAGAGGGTGCGCGACATGTCCGACAGATATCGCGATCAGCAGCAGAC
TCCTTTGGAGCGGGCCGTTTATTGGGTGGAGCATGTGTCCCGGCATAAGG
GTGCCAAGTATCTAAGGAGCGCCTCCCAGGATCTGAATTTCATTCAATAC
CACAATCTGGACGCAATGCTGATACTATATGGCGGCATTATATTCGTGCT
CTATTGTATTTTCCTGCTGATCCGTTTAGTGTGGCGACTCCTGCAGGAAT
TATTTATTAAGAAGGACACTTCCAAGCCAAAGCAGAAAGCCAAGCGGAAT
TAAAAGCTTTCTAGACCAT
BS04273.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:58:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Da-RA | 1587 | CG18578-PA | 1..1587 | 17..1603 | 7935 | 100 | Plus |
Ugt86Dc-RA | 1566 | CG4739-PA | 658..1187 | 683..1209 | 425 | 72.5 | Plus |
Ugt86Dc-RA | 1566 | CG4739-PA | 1308..1439 | 1330..1461 | 345 | 84.1 | Plus |
Ugt86Di-RB | 1560 | CG6658-PB | 1003..1187 | 1034..1218 | 250 | 75.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Da-RA | 1994 | CG18578-RA | 144..1730 | 17..1603 | 7935 | 100 | Plus |
Ugt86Dc-RA | 1595 | CG4739-RA | 687..1216 | 683..1209 | 425 | 72.5 | Plus |
Ugt86Dc-RA | 1595 | CG4739-RA | 1337..1468 | 1330..1461 | 345 | 84.1 | Plus |
Ugt86Dd-RB | 1671 | CG6633-RB | 761..1022 | 778..1039 | 275 | 73.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11158406..11159480 | 529..1603 | 5375 | 100 | Plus |
3R | 32079331 | 3R | 11158077..11158342 | 269..534 | 1330 | 100 | Plus |
3R | 32079331 | 3R | 11157241..11157494 | 17..270 | 1270 | 100 | Plus |
3R | 32079331 | 3R | 11155605..11156134 | 683..1209 | 425 | 72.5 | Plus |
3R | 32079331 | 3R | 11156255..11156386 | 1330..1461 | 345 | 84.1 | Plus |
3R | 32079331 | 3R | 11152342..11152526 | 1218..1034 | 250 | 75.7 | Minus |
3R | 32079331 | 3R | 11152734..11152816 | 826..744 | 220 | 84.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:58:26 has no hits.
BS04273.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:57:29 Download gff for
BS04273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 1..1587 | 17..1603 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:33:47 Download gff for
BS04273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 142..1731 | 17..1608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:39 Download gff for
BS04273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 144..1728 | 17..1601 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:57:29 Download gff for
BS04273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 142..1731 | 17..1608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:07:13 Download gff for
BS04273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Da-RA | 144..1728 | 17..1601 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:07:13 Download gff for
BS04273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11157241..11157493 | 17..269 | 100 | -> | Plus |
3R | 11158078..11158337 | 270..529 | 100 | -> | Plus |
3R | 11158407..11159478 | 530..1601 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:39 Download gff for
BS04273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6982963..6983215 | 17..269 | 100 | -> | Plus |
arm_3R | 6983800..6984059 | 270..529 | 100 | -> | Plus |
arm_3R | 6984129..6985200 | 530..1601 | 100 | | Plus |
BS04273.pep Sequence
Translation from 16 to 1602
> BS04273.pep
MKPTAGQTGFLALLLFCLLSCVSAYNYLVVLHTAARSHYHVGSALAKGLA
AAGHQVTIISPFELKKPIKNIKDVPAKSILTSMQGRIANLLQSSKEPIIK
QIINFHEMGIEITELLLKEPSVIELMKSNQTFDAVISEVFLNEAHFGFAE
HFKAPLIGLGTFGAISWNTDLVGSPSPPSYVPSALLKFSDRMSLVERVGN
QAFLTYEYIFLNYFYLPRQEVLYRKYFPNNKQDFYDMRKNTALVLLNQHV
SLSFPRPYSPNMIEVGGMHINRKRQPLPKDILEFIEGAEHGVIYFSMGSN
LKSKTLPLEKRQALIDTFAQLKQRVLWKFEDTDLPGKPANVFISDWFPQD
DILAHDNVLAFITHGGLLSTTESIYHRKPFVGIPIFGDQFLNMARAEQNG
YGVTVHYEELSSAKLLAAIQKIINNPEATQRVRDMSDRYRDQQQTPLERA
VYWVEHVSRHKGAKYLRSASQDLNFIQYHNLDAMLILYGGIIFVLYCIFL
LIRLVWRLLQELFIKKDTSKPKQKAKRN*
BS04273.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Da-PA | 528 | CG18578-PA | 1..528 | 1..528 | 2732 | 100 | Plus |
Ugt86Dc-PA | 521 | CG4739-PA | 10..519 | 13..522 | 1604 | 60.1 | Plus |
Ugt86Di-PB | 519 | CG6658-PB | 2..519 | 7..528 | 1485 | 54.4 | Plus |
Ugt86Di-PA | 519 | CG6658-PA | 2..519 | 7..528 | 1485 | 54.4 | Plus |
Ugt35b-PA | 516 | CG6649-PA | 6..496 | 11..498 | 1081 | 45.9 | Plus |