Clone BS04273 Report

Search the DGRC for BS04273

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:42
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptUgt86Da-RA
Protein status:BS04273.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS04273.3prime Sequence

946 bp (828 high quality bases) assembled on 2005-12-01

> BS04273.3prime
ATGGTCTAGAAAGCTTTTAATTCCGCTTGGCTTTCTGCTTTGGCTTGGAA
GTGTCCTTCTTAATAAATAATTCCTGCAGGAGTCGCCACACTAAACGGAT
CAGCAGGAAAATACAATAGAGCACGAATATAATGCCGCCATATAGTATCA
GCATTGCGTCCAGATTGTGGTATTGAATGAAATTCAGATCCTGGGAGGCG
CTCCTTAGATACTTGGCACCCTTATGCCGGGACACATGCTCCACCCAATA
AACGGCCCGCTCCAAAGGAGTCTGCTGCTGATCGCGATATCTGTCGGACA
TGTCGCGCACCCTCTGGGTGGCTTCGGGATTGTTGATTATTTTCTGAATC
GCAGCCAAAAGCTTGGCAGAACTCAATTCCTCGTAATGAACAGTCACCCC
GTAGCCATTCTGCTCGGCACGAGCCATGTTCAGGAACTGATCGCCAAAGA
TTGGAATGCCCACGAAGGGTTTGCGATGGTAAATGGACTCCGTGGTACTG
AGCAGACCGCCGTGCGTAATAAAGGCCAGCACATTGTCATGGGCCAGGAT
GTCGTCCTGAGGGAACCAGTCCGAGATGAACACATTGGCGGGCTTTCCGG
GCAGATCCGTGTCCTCGAACTTCCACAGCACACGCTGCTTCAGCTGGGCA
AAGGTGTCGATCAGCGCCTGGCGTTTTTCCAACGGCAGTGTTTTGCTCTT
CAGATTGGAGCCCATCGAGAAGTAGATAACTCCATGCTCGGCACCCTCAA
TGAACTCCAGAATGTCCTTGGGCAGCGGCTGGCGCTTTCGATTGATGTGC
ATGCCGCCCACCTCGATCATATTGGGTGAGTAGGGTCGTGGAAAACTGAG
CGATACATGTTGATTGAGCAGCACCAGAGCCGTGTTCTTGCGCATATCGT
AAAAGTCCTGCTTTTGTATGGGGAAGTACTTGCGGTAGAGGACCTC

BS04273.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG18578-PA 1587 Ugt86Da-RA 691..1587 913..17 4485 100 Minus
CG4739-PA 1566 Ugt86Dc-RA 1345..1439 253..159 200 88.4 Minus
CG18578-PA 1587 Ugt86Da-RA 658..685 946..919 140 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Da-RA 1994 CG18578-RA 801..1730 946..17 4590 99.7 Minus
Ugt86Dc-RA 1595 CG4739-RA 687..1221 937..405 475 73.9 Minus
Ugt86Dc-RA 1595 CG4739-RA 1337..1468 290..159 345 84.1 Minus
Ugt86Di-RB 2556 CG6658-RB 1056..1240 586..402 250 77 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:38:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11158551..11159480 946..17 4590 99.6 Minus
3R 32079331 3R 11155605..11156134 937..411 380 71.9 Minus
3R 32079331 3R 11156255..11156386 290..159 345 84.1 Minus
3R 32079331 3R 11152342..11152526 402..586 250 75.7 Plus
3R 32079331 3R 11152734..11152816 794..876 220 84.3 Plus
Blast to na_te.dros performed on 2015-02-10 18:38:17 has no hits.

BS04273.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:44:21 Download gff for BS04273.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18578-PA 658..1587 17..946 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:04:27 Download gff for BS04273.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18578-PA 658..1587 17..946 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:02:49 Download gff for BS04273.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 801..1733 12..946 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:53:07 Download gff for BS04273.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 801..1733 12..946 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:53:07 Download gff for BS04273.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11158551..11159486 15..946 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:02:49 Download gff for BS04273.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6984273..6985208 15..946 99 -> Minus

BS04273.5prime Sequence

917 bp (805 high quality bases) assembled on 2005-12-01

> BS04273.5prime
GAAGTTATCAGTCGACATGAAACCAACAGCTGGCCAAACGGGTTTTCTGG
CCCTACTGCTGTTCTGCCTGCTGAGCTGCGTGTCTGCCTACAACTACCTG
GTGGTGCTCCATACCGCCGCACGATCCCATTACCATGTGGGATCTGCCCT
GGCCAAGGGATTAGCCGCTGCGGGACATCAGGTGACCATCATCTCCCCCT
TCGAGCTGAAGAAACCCATCAAGAACATCAAAGATGTTCCGGCCAAGAGC
ATTCTGACTTCCATGCAGGGAAGAATTGCTAACCTTTTGCAAAGCTCAAA
GGAGCCCATAATCAAGCAGATCATTAACTTTCACGAAATGGGTATTGAAA
TAACCGAATTGCTGCTGAAGGAACCATCTGTGATAGAACTGATGAAATCC
AACCAGACCTTCGATGCCGTAATATCCGAGGTGTTCCTGAACGAAGCTCA
CTTCGGATTCGCCGAGCATTTCAAGGCTCCACTTATAGGACTGGGCACCT
TTGGAGCTATTAGCTGGAACACCGATCTGGTGGGATCTCCTTCACCGCCC
TCGTATGTTCCCAGTGCACTGCTGAAGTTTAGTGACCGCATGTCCCTCGT
AGAGCGAGTGGGCAACCAGGCCTTCCTCACCTACGAATATATCTTCCTCA
ACTACTTCTATCTGCCGCGCCAGGAGGTCCTCTACCGCAAGTACTTCCCC
AATAACAAGCAGGACTTTTACGATATGCGCAAGAACACGGCTCTGGTGCT
GCTCAATCAACATGTATCGCTCAGTTTTCCACGACCCTACTCACCCAATA
TGATCGAGGTGGGCGGCATGCACATCAATCGAAAGCGCCAGCCGCTGCCC
AAGGACATTCTGGAGTTCATTGAGGGTGCCGAGCATGGAGTTATCTACTT
CTCGATGGGCTCCCATC

BS04273.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG18578-PA 1587 Ugt86Da-RA 1..897 17..913 4485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:07:40
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Da-RA 1994 CG18578-RA 144..1044 17..917 4490 99.9 Plus
Ugt86Dc-RA 1595 CG4739-RA 687..924 683..917 345 77.4 Plus
Ugt86Di-RB 2556 CG6658-RB 766..848 744..826 220 84.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:07:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11158406..11158794 529..917 1930 99.7 Plus
3R 32079331 3R 11158077..11158342 269..534 1330 100 Plus
3R 32079331 3R 11157241..11157494 17..270 1270 100 Plus
3R 32079331 3R 11155605..11155842 683..917 300 76.1 Plus
3R 32079331 3R 11152734..11152816 826..744 220 84.3 Minus
Blast to na_te.dros performed on 2015-02-11 11:07:38 has no hits.

BS04273.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:44:22 Download gff for BS04273.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18578-PA 1..901 17..917 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:04:29 Download gff for BS04273.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18578-PA 1..901 17..917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:32:48 Download gff for BS04273.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 144..1044 17..917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:42:01 Download gff for BS04273.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 144..1044 17..917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:42:01 Download gff for BS04273.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11157241..11157493 17..269 100 -> Plus
3R 11158078..11158337 270..529 100 -> Plus
3R 11158407..11158794 530..917 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:32:48 Download gff for BS04273.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6982963..6983215 17..269 100 -> Plus
arm_3R 6983800..6984059 270..529 100 -> Plus
arm_3R 6984129..6984516 530..917 99   Plus

BS04273.complete Sequence

1619 bp (1619 high quality bases) assembled on 2006-02-02

GenBank Submission: FJ634908

> BS04273.complete
GAAGTTATCAGTCGACATGAAACCAACAGCTGGCCAAACGGGTTTTCTGG
CCCTACTGCTGTTCTGCCTGCTGAGCTGCGTGTCTGCCTACAACTACCTG
GTGGTGCTCCATACCGCCGCACGATCCCATTACCATGTGGGATCTGCCCT
GGCCAAGGGATTAGCCGCTGCGGGACATCAGGTGACCATCATCTCCCCCT
TCGAGCTGAAGAAACCCATCAAGAACATCAAAGATGTTCCGGCCAAGAGC
ATTCTGACTTCCATGCAGGGAAGAATTGCTAACCTTTTGCAAAGCTCAAA
GGAGCCCATAATCAAGCAGATCATTAACTTTCACGAAATGGGTATTGAAA
TAACCGAATTGCTGCTGAAGGAACCATCTGTGATAGAACTGATGAAATCC
AACCAGACCTTCGATGCCGTAATATCCGAGGTGTTCCTGAACGAAGCTCA
CTTCGGATTCGCCGAGCATTTCAAGGCTCCACTTATAGGACTGGGCACCT
TTGGAGCTATTAGCTGGAACACCGATCTGGTGGGATCTCCTTCACCGCCC
TCGTATGTTCCCAGTGCACTGCTGAAGTTTAGTGACCGCATGTCCCTCGT
AGAGCGAGTGGGCAACCAGGCCTTCCTCACCTACGAATATATCTTCCTCA
ACTACTTCTATCTGCCGCGCCAGGAGGTCCTCTACCGCAAGTACTTCCCC
AATAACAAGCAGGACTTTTACGATATGCGCAAGAACACGGCTCTGGTGCT
GCTCAATCAACATGTATCGCTCAGTTTTCCACGACCCTACTCACCCAATA
TGATCGAGGTGGGCGGCATGCACATCAATCGAAAGCGCCAGCCGCTGCCC
AAGGACATTCTGGAGTTCATTGAGGGTGCCGAGCATGGAGTTATCTACTT
CTCGATGGGCTCCAATCTGAAGAGCAAAACACTGCCGTTGGAAAAACGCC
AGGCGCTGATCGACACCTTTGCCCAGCTGAAGCAGCGTGTGCTGTGGAAG
TTCGAGGACACGGATCTGCCCGGAAAGCCCGCCAATGTGTTCATCTCGGA
CTGGTTCCCTCAGGACGACATCCTGGCCCATGACAATGTGCTGGCCTTTA
TTACGCACGGCGGTCTGCTCAGTACCACGGAGTCCATTTACCATCGCAAA
CCCTTCGTGGGCATTCCAATCTTTGGCGATCAGTTCCTGAACATGGCTCG
TGCCGAGCAGAATGGCTACGGGGTGACTGTTCATTACGAGGAATTGAGTT
CTGCCAAGCTTTTGGCTGCGATTCAGAAAATAATCAACAATCCCGAAGCC
ACCCAGAGGGTGCGCGACATGTCCGACAGATATCGCGATCAGCAGCAGAC
TCCTTTGGAGCGGGCCGTTTATTGGGTGGAGCATGTGTCCCGGCATAAGG
GTGCCAAGTATCTAAGGAGCGCCTCCCAGGATCTGAATTTCATTCAATAC
CACAATCTGGACGCAATGCTGATACTATATGGCGGCATTATATTCGTGCT
CTATTGTATTTTCCTGCTGATCCGTTTAGTGTGGCGACTCCTGCAGGAAT
TATTTATTAAGAAGGACACTTCCAAGCCAAAGCAGAAAGCCAAGCGGAAT
TAAAAGCTTTCTAGACCAT

BS04273.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Da-RA 1587 CG18578-PA 1..1587 17..1603 7935 100 Plus
Ugt86Dc-RA 1566 CG4739-PA 658..1187 683..1209 425 72.5 Plus
Ugt86Dc-RA 1566 CG4739-PA 1308..1439 1330..1461 345 84.1 Plus
Ugt86Di-RB 1560 CG6658-PB 1003..1187 1034..1218 250 75.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:28
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Da-RA 1994 CG18578-RA 144..1730 17..1603 7935 100 Plus
Ugt86Dc-RA 1595 CG4739-RA 687..1216 683..1209 425 72.5 Plus
Ugt86Dc-RA 1595 CG4739-RA 1337..1468 1330..1461 345 84.1 Plus
Ugt86Dd-RB 1671 CG6633-RB 761..1022 778..1039 275 73.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11158406..11159480 529..1603 5375 100 Plus
3R 32079331 3R 11158077..11158342 269..534 1330 100 Plus
3R 32079331 3R 11157241..11157494 17..270 1270 100 Plus
3R 32079331 3R 11155605..11156134 683..1209 425 72.5 Plus
3R 32079331 3R 11156255..11156386 1330..1461 345 84.1 Plus
3R 32079331 3R 11152342..11152526 1218..1034 250 75.7 Minus
3R 32079331 3R 11152734..11152816 826..744 220 84.3 Minus
Blast to na_te.dros performed on 2014-11-27 15:58:26 has no hits.

BS04273.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:57:29 Download gff for BS04273.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 1..1587 17..1603 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:33:47 Download gff for BS04273.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 142..1731 17..1608 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:39 Download gff for BS04273.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 144..1728 17..1601 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:57:29 Download gff for BS04273.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 142..1731 17..1608 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:07:13 Download gff for BS04273.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Da-RA 144..1728 17..1601 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:07:13 Download gff for BS04273.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11157241..11157493 17..269 100 -> Plus
3R 11158078..11158337 270..529 100 -> Plus
3R 11158407..11159478 530..1601 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:39 Download gff for BS04273.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6982963..6983215 17..269 100 -> Plus
arm_3R 6983800..6984059 270..529 100 -> Plus
arm_3R 6984129..6985200 530..1601 100   Plus

BS04273.pep Sequence

Translation from 16 to 1602

> BS04273.pep
MKPTAGQTGFLALLLFCLLSCVSAYNYLVVLHTAARSHYHVGSALAKGLA
AAGHQVTIISPFELKKPIKNIKDVPAKSILTSMQGRIANLLQSSKEPIIK
QIINFHEMGIEITELLLKEPSVIELMKSNQTFDAVISEVFLNEAHFGFAE
HFKAPLIGLGTFGAISWNTDLVGSPSPPSYVPSALLKFSDRMSLVERVGN
QAFLTYEYIFLNYFYLPRQEVLYRKYFPNNKQDFYDMRKNTALVLLNQHV
SLSFPRPYSPNMIEVGGMHINRKRQPLPKDILEFIEGAEHGVIYFSMGSN
LKSKTLPLEKRQALIDTFAQLKQRVLWKFEDTDLPGKPANVFISDWFPQD
DILAHDNVLAFITHGGLLSTTESIYHRKPFVGIPIFGDQFLNMARAEQNG
YGVTVHYEELSSAKLLAAIQKIINNPEATQRVRDMSDRYRDQQQTPLERA
VYWVEHVSRHKGAKYLRSASQDLNFIQYHNLDAMLILYGGIIFVLYCIFL
LIRLVWRLLQELFIKKDTSKPKQKAKRN*

BS04273.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:13
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Da-PA 528 CG18578-PA 1..528 1..528 2732 100 Plus
Ugt86Dc-PA 521 CG4739-PA 10..519 13..522 1604 60.1 Plus
Ugt86Di-PB 519 CG6658-PB 2..519 7..528 1485 54.4 Plus
Ugt86Di-PA 519 CG6658-PA 2..519 7..528 1485 54.4 Plus
Ugt35b-PA 516 CG6649-PA 6..496 11..498 1081 45.9 Plus