Clone Sequence Records
BS04275.5prime Sequence
762 bp (761 high quality bases) assembled on 2005-11-29
> BS04275.5prime
GAAGTTATCAGTCGACATGTCGGACAGCGATACGGACACCGTGGACGAGC
TTTTCCACCTTGCCACCGAGCATGTGGCCAAGCAGTCAAACAGCATTGGT
TCCGCGGACCTTTTAATATTTTACGGATACTACAAGCAGGCCACGAATGG
CCCCTGCAAGGAGCAAAGTCCGGGTCTGCTTCAACTGCAGGCCAAGAGCA
AGTGGCAGGCTTGGCGCAATCTGGGAACAATGTCCCAGTCCGCTGCCCGG
CAGGCCTACGTCCAGAAGCTGCAGGAGCTTCAACCCAACTGGCGGTCCCG
GCGCAACCCAGGCTGGGTCGTTCATTCCATTGAGTCGGTCCCACTGGAGG
ACCAACGTTTGGACAGTGAAAAGACCCTGTTTGACCACGTGAAGGAGAAC
AATCTAGACAGGCTGAGGGAACTGCTGCAGCCAAGTGACTTGGTTAAGCT
GGACGAGCATGGCATGGCGCTCATCCACTGGGCTACCGATCGCAATGCCG
TCGAAATCATACAGTTCCTGGTGCGGAGTGGGGCCAGTGTAAATCAGCGA
GATGCGGAGCAACAGACTCCGCTGCACTACGCCGCCAGTTGTGGACACTT
GGAGGCGCTCCAATGCCTGTTGGAGCTACACGCCAGCCTGGAGCTACGCG
ATTCAGATGGACAGACTTGTTACGACGTGGCTGACGATGAGCAGATCTGC
CAGGTGCTTCAAACGGAACGGGAACGACTCGCTGGATCCGCGTCCTAAAA
GCTTTCTAGACC
BS04275.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33713-PA | 732 | CG33713-RA | 1..732 | 17..748 | 3660 | 100 | Plus |
CG33713-PB | 732 | CG33713-RB | 1..732 | 17..748 | 3660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:59:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33714-RB | 1279 | CG33714-RB | 417..1151 | 14..748 | 3675 | 100 | Plus |
CG33714-RA | 1278 | CG33714-RA | 416..1150 | 14..748 | 3675 | 100 | Plus |
CG33713-RB | 1278 | CG33713-RB | 416..1150 | 14..748 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:59:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21318064..21318798 | 748..14 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 18:59:29 has no hits.
BS04275.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:44:25 Download gff for
BS04275.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33071-PB | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:04:32 Download gff for
BS04275.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-PB | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:27:31 Download gff for
BS04275.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 416..1150 | 14..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:28:15 Download gff for
BS04275.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 416..1150 | 14..748 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:28:15 Download gff for
BS04275.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21318064..21318798 | 14..748 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:27:31 Download gff for
BS04275.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21189091..21189825 | 14..748 | 100 | | Minus |
BS04275.3prime Sequence
762 bp (761 high quality bases) assembled on 2005-12-01
> BS04275.3prime
ATGGTCTAGAAAGCTTTTAGGACGCGGATCCAGCGAGTCGTTCCCGTTCC
GTTTGAAGCACCTGGCAGATCTGCTCATCGTCAGCCACGTCGTAACAAGT
CTGTCCATCTGAATCGCGTAGCTCCAGGCTGGCGTGTAGCTCCAACAGGC
ATTGGAGCGCCTCCAAGTGTCCACAACTGGCGGCGTAGTGCAGCGGAGTC
TGTTGCTCCGCATCTCGCTGATTTACACTGGCCCCACTCCGCACCAGGAA
CTGTATGATTTCGACGGCATTGCGATCGGTAGCCCAGTGGATGAGCGCCA
TGCCATGCTCGTCCAGCTTAACCAAGTCACTTGGCTGCAGCAGTTCCCTC
AGCCTGTCTAGATTGTTCTCCTTCACGTGGTCAAACAGGGTCTTTTCACT
GTCCAAACGTTGGTCCTCCAGTGGGACCGACTCAATGGAATGAACGACCC
AGCCTGGGTTGCGCCGGGACCGCCAGTTGGGTTGAAGCTCCTGCAGCTTC
TGGACGTAGGCCTGCCGGGCAGCGGACTGGGACATTGTTCCCAGATTGCG
CCAAGCCTGCCACTTGCTCTTGGCCTGCAGTTGAAGCAGACCCGGACTTT
GCTCCTTGCAGGGGCCATTCGTGGCCTGCTTGTAGTATCCGTAAAATATT
AAAAGGTCCGCGGAACCAATGCTGTTTGACTGCTTGGCCACATGCTCGGT
GGCAAGGTGGAAAAGCTCGTCCACGGTGTCCGTATCGCTGTCCGACATGT
CGACTGATAACT
BS04275.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33713-PA | 732 | CG33713-RA | 1..732 | 748..17 | 3660 | 100 | Minus |
CG33713-PB | 732 | CG33713-RB | 1..732 | 748..17 | 3660 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:15:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33714-RB | 1279 | CG33714-RB | 417..1151 | 751..17 | 3675 | 100 | Minus |
CG33714-RA | 1278 | CG33714-RA | 416..1150 | 751..17 | 3675 | 100 | Minus |
CG33713-RB | 1278 | CG33713-RB | 416..1150 | 751..17 | 3675 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:15:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21318064..21318798 | 17..751 | 3675 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:15:28 has no hits.
BS04275.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:44:24 Download gff for
BS04275.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33071-PB | 1..732 | 17..748 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:04:31 Download gff for
BS04275.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-PB | 1..732 | 17..748 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:09:17 Download gff for
BS04275.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 416..1150 | 17..751 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:48:57 Download gff for
BS04275.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 416..1150 | 17..751 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:48:57 Download gff for
BS04275.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21318064..21318798 | 17..751 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:09:17 Download gff for
BS04275.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21189091..21189825 | 17..751 | 100 | | Plus |
BS04275.complete Sequence
764 bp (764 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634909
> BS04275.complete
GAAGTTATCAGTCGACATGTCGGACAGCGATACGGACACCGTGGACGAGC
TTTTCCACCTTGCCACCGAGCATGTGGCCAAGCAGTCAAACAGCATTGGT
TCCGCGGACCTTTTAATATTTTACGGATACTACAAGCAGGCCACGAATGG
CCCCTGCAAGGAGCAAAGTCCGGGTCTGCTTCAACTGCAGGCCAAGAGCA
AGTGGCAGGCTTGGCGCAATCTGGGAACAATGTCCCAGTCCGCTGCCCGG
CAGGCCTACGTCCAGAAGCTGCAGGAGCTTCAACCCAACTGGCGGTCCCG
GCGCAACCCAGGCTGGGTCGTTCATTCCATTGAGTCGGTCCCACTGGAGG
ACCAACGTTTGGACAGTGAAAAGACCCTGTTTGACCACGTGAAGGAGAAC
AATCTAGACAGGCTGAGGGAACTGCTGCAGCCAAGTGACTTGGTTAAGCT
GGACGAGCATGGCATGGCGCTCATCCACTGGGCTACCGATCGCAATGCCG
TCGAAATCATACAGTTCCTGGTGCGGAGTGGGGCCAGTGTAAATCAGCGA
GATGCGGAGCAACAGACTCCGCTGCACTACGCCGCCAGTTGTGGACACTT
GGAGGCGCTCCAATGCCTGTTGGAGCTACACGCCAGCCTGGAGCTACGCG
ATTCAGATGGACAGACTTGTTACGACGTGGCTGACGATGAGCAGATCTGC
CAGGTGCTTCAAACGGAACGGGAACGACTCGCTGGATCCGCGTCCTAAAA
GCTTTCTAGACCAT
BS04275.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:37:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33713-RB | 732 | CG33713-PB | 1..732 | 17..748 | 3660 | 100 | Plus |
CG33713-RA | 732 | CG33713-PA | 1..732 | 17..748 | 3660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:37:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33714-RB | 1279 | CG33714-RB | 417..1151 | 14..748 | 3675 | 100 | Plus |
CG33714-RA | 1278 | CG33714-RA | 416..1150 | 14..748 | 3675 | 100 | Plus |
CG33713-RB | 1278 | CG33713-RB | 416..1150 | 14..748 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:37:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21318064..21318798 | 748..14 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:37:44 has no hits.
BS04275.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:53:56 Download gff for
BS04275.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:29:43 Download gff for
BS04275.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33714-RA | 416..1150 | 14..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:28:24 Download gff for
BS04275.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 419..1148 | 17..746 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:53:57 Download gff for
BS04275.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33714-RA | 416..1150 | 14..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:35:15 Download gff for
BS04275.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 419..1148 | 17..746 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:35:15 Download gff for
BS04275.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21318066..21318795 | 17..746 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:28:24 Download gff for
BS04275.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21189093..21189822 | 17..746 | 100 | | Minus |
BS04275.pep Sequence
Translation from 16 to 747
> BS04275.pep
MSDSDTDTVDELFHLATEHVAKQSNSIGSADLLIFYGYYKQATNGPCKEQ
SPGLLQLQAKSKWQAWRNLGTMSQSAARQAYVQKLQELQPNWRSRRNPGW
VVHSIESVPLEDQRLDSEKTLFDHVKENNLDRLRELLQPSDLVKLDEHGM
ALIHWATDRNAVEIIQFLVRSGASVNQRDAEQQTPLHYAASCGHLEALQC
LLELHASLELRDSDGQTCYDVADDEQICQVLQTERERLAGSAS*
BS04275.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:48:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33713-PB | 243 | CG33713-PB | 1..243 | 1..243 | 1267 | 100 | Plus |
CG33713-PA | 243 | CG33713-PA | 1..243 | 1..243 | 1267 | 100 | Plus |
MYPT-75D-PB | 635 | CG6896-PB | 118..237 | 116..234 | 180 | 33.3 | Plus |
MYPT-75D-PD | 741 | CG6896-PD | 118..237 | 116..234 | 180 | 33.3 | Plus |
MYPT-75D-PC | 741 | CG6896-PC | 118..237 | 116..234 | 180 | 33.3 | Plus |