Clone Sequence Records
BS04281.3prime Sequence
525 bp (524 high quality bases) assembled on 2005-12-01
> BS04281.3prime
ATGGTCTAGAAAGCTTTCAGAGGGCTCCGCAGTCTTCGATAATTACTTTC
TTGCTGGTCTTCCCATCTTGTGAACCGTAAGATTCTACCTTCTGGACGAT
ATCCATTCCCTCAACGACCTTGCCGAACACGACATGCTTATTATCCAGCC
ATGTGGTTTTCCCGGTGCAAATGAAAAACTGAGATCCATTGGTATTGGCC
CCAGCATTGGCCATCGAAAGTACACCAGCTCCGGTATGCTTTAGCTCGAA
ATTCTCATCGGGAAACTTGTTTCCATAAATGGAGCGTCCTCCAGTTCCGT
TTTGATTAGTGAAATCACCGCCCTGACACATGAAATTCGGGATGACGCGG
TGGAATGGTGATCCCTTGTAGCCGTACCCCTTCTCTCCGGTGCAGAGGGC
CCGGAAATTCTCCGCCGTCTTGGGCACCACATCCGAACGTAGTTCCATCA
CAATTCTACCTAACTTCTCACCTCCTGCGGCTATATCGAAGTAAACGCGT
GGCAACGACATGTCGACTGATAACT
BS04281.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-PB | 495 | CG7768-RB | 1..495 | 511..17 | 2475 | 100 | Minus |
CG7768-PA | 495 | CG7768-RA | 1..495 | 511..17 | 2475 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:00:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-RB | 679 | CG7768-RB | 88..583 | 511..16 | 2480 | 100 | Minus |
CG7768-RA | 717 | CG7768-RA | 126..621 | 511..16 | 2480 | 100 | Minus |
Cyp1-RA | 1227 | CG9916-RA | 287..687 | 448..48 | 745 | 79.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:00:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14218383..14218878 | 511..16 | 2480 | 100 | Minus |
X | 23542271 | X | 16318213..16318598 | 48..433 | 730 | 79.3 | Plus |
Blast to na_te.dros performed on 2015-01-30 16:00:50 has no hits.
BS04281.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:44:34 Download gff for
BS04281.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-PB | 1..495 | 17..511 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:04:43 Download gff for
BS04281.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-PA | 1..495 | 17..511 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:19:44 Download gff for
BS04281.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 115..632 | 4..521 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:47:17 Download gff for
BS04281.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 116..633 | 4..521 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:47:17 Download gff for
BS04281.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14218373..14218890 | 4..521 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:19:44 Download gff for
BS04281.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14211473..14211990 | 4..521 | 98 | | Minus |
BS04281.5prime Sequence
525 bp (524 high quality bases) assembled on 2005-11-29
> BS04281.5prime
GAAGTTATCAGTCGACATGTCGTTGCCACGCGTTTACTTCGATATAGCCG
CAGGAGGTGAGAAGTTAGGTAGAATTGTGATGGAACTACGTTCGGATGTG
GTGCCCAAGACGGCGGAGAATTTCCGGGCCCTCTGCACCGGAGAGAAGGG
GTACGGCTACAAGGGATCACCATTCCACCGCGTCATCCCGAATTTCATGT
GTCAGGGCGGTGATTTCACTAATCAAAACGGAACTGGAGGACGCTCCATT
TATGGAAACAAGTTTCCCGATGAGAATTTCGAGCTAAAGCATACCGGAGC
TGGTGTACTTTCGATGGCCAATGCTGGGGCCAATACCAATGGATCTCAGT
TTTTCATTTGCACCGGGAAAACCACATGGCTGGATAATAAGCATGTCGTG
TTCGGCAAGGTCGTTGAGGGAATGGATATCGTCCAGAAGGTAGAATCTTA
CGGTTCACAAGATGGGAAGACCAGCAAGAAAGTAATTATCGAAGACTGCG
GAGCCCTCTGAAAGCTTTCTAGACC
BS04281.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-PB | 495 | CG7768-RB | 1..495 | 17..511 | 2475 | 100 | Plus |
CG7768-PA | 495 | CG7768-RA | 1..495 | 17..511 | 2475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:13:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-RB | 679 | CG7768-RB | 88..583 | 17..512 | 2480 | 100 | Plus |
CG7768-RA | 717 | CG7768-RA | 126..621 | 17..512 | 2480 | 100 | Plus |
Cyp1-RA | 1227 | CG9916-RA | 287..687 | 80..480 | 745 | 79.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 12:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14218383..14218878 | 17..512 | 2480 | 100 | Plus |
X | 23542271 | X | 16318213..16318598 | 480..95 | 730 | 79.3 | Minus |
Blast to na_te.dros performed on 2015-02-02 12:12:56 has no hits.
BS04281.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:44:35 Download gff for
BS04281.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-PB | 1..495 | 17..511 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:04:44 Download gff for
BS04281.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-PA | 1..495 | 17..511 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 13:57:20 Download gff for
BS04281.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 115..632 | 7..524 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:38:53 Download gff for
BS04281.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 116..633 | 7..524 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:38:53 Download gff for
BS04281.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14218373..14218890 | 7..524 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 13:57:20 Download gff for
BS04281.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14211473..14211990 | 7..524 | 98 | | Plus |
BS04281.complete Sequence
527 bp (527 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634912
> BS04281.complete
GAAGTTATCAGTCGACATGTCGTTGCCACGCGTTTACTTCGATATAGCCG
CAGGAGGTGAGAAGTTAGGTAGAATTGTGATGGAACTACGTTCGGATGTG
GTGCCCAAGACGGCGGAGAATTTCCGGGCCCTCTGCACCGGAGAGAAGGG
GTACGGCTACAAGGGATCACCATTCCACCGCGTCATCCCGAATTTCATGT
GTCAGGGCGGTGATTTCACTAATCAAAACGGAACTGGAGGACGCTCCATT
TATGGAAACAAGTTTCCCGATGAGAATTTCGAGCTAAAGCATACCGGAGC
TGGTGTACTTTCGATGGCCAATGCTGGGGCCAATACCAATGGATCTCAGT
TTTTCATTTGCACCGGGAAAACCACATGGCTGGATAATAAGCATGTCGTG
TTCGGCAAGGTCGTTGAGGGAATGGATATCGTCCAGAAGGTAGAATCTTA
CGGTTCACAAGATGGGAAGACCAGCAAGAAAGTAATTATCGAAGACTGCG
GAGCCCTCTGAAAGCTTTCTAGACCAT
BS04281.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:21:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-RB | 495 | CG7768-PB | 1..495 | 17..511 | 2475 | 100 | Plus |
CG7768-RA | 495 | CG7768-PA | 1..495 | 17..511 | 2475 | 100 | Plus |
Cyp1-RA | 684 | CG9916-PA | 253..653 | 80..480 | 745 | 79.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:21:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-RB | 679 | CG7768-RB | 88..583 | 17..512 | 2480 | 100 | Plus |
CG7768-RA | 717 | CG7768-RA | 126..621 | 17..512 | 2480 | 100 | Plus |
Cyp1-RA | 1227 | CG9916-RA | 287..687 | 80..480 | 745 | 79.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:21:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14218383..14218878 | 17..512 | 2480 | 100 | Plus |
X | 23542271 | X | 16318213..16318598 | 480..95 | 730 | 79.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:21:51 has no hits.
BS04281.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:48:20 Download gff for
BS04281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 1..495 | 17..511 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:36:21 Download gff for
BS04281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RB | 465..982 | 7..524 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:36 Download gff for
BS04281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 125..618 | 17..510 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:03 Download gff for
BS04281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 126..619 | 17..510 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:03 Download gff for
BS04281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14218383..14218876 | 17..510 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:36 Download gff for
BS04281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14211483..14211976 | 17..510 | 100 | | Plus |
BS04281.pep Sequence
Translation from 16 to 510
> BS04281.pep
MSLPRVYFDIAAGGEKLGRIVMELRSDVVPKTAENFRALCTGEKGYGYKG
SPFHRVIPNFMCQGGDFTNQNGTGGRSIYGNKFPDENFELKHTGAGVLSM
ANAGANTNGSQFFICTGKTTWLDNKHVVFGKVVEGMDIVQKVESYGSQDG
KTSKKVIIEDCGAL*
BS04281.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-PB | 164 | CG7768-PB | 1..164 | 1..164 | 875 | 100 | Plus |
CG7768-PA | 164 | CG7768-PA | 1..164 | 1..164 | 875 | 100 | Plus |
Cyp1-PA | 227 | CG9916-PA | 65..227 | 2..164 | 752 | 83.4 | Plus |
cyp33-PA | 300 | CG4886-PA | 139..299 | 4..164 | 625 | 70.8 | Plus |
CG2852-PD | 205 | CG2852-PD | 30..190 | 5..164 | 480 | 57.1 | Plus |