Clone BS04332 Report

Search the DGRC for BS04332

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:43
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG11178-RB
Protein status:BS04332.pep: full length peptide match
Sequenced Size:2156

Clone Sequence Records

BS04332.complete Sequence

2156 bp assembled on 2009-12-07

GenBank Submission: KX799544

> BS04332.complete
GAAGTTATCAGTCGACATGGCCAGCGAGCCGGAGAACAAGCCACCGATCC
TGCACATCCTCGTGGTGGGCTTCCACCACAAGCTGGGCTGCCAGGTGGAG
TTCTCGCATCCGCCGCTAATCTCGGGCTCCACGGGACGCAACGAATGCCC
CTCCGGCTGGAAGTACCTGCCCACTCTGGCTCTGCCCGACGGCTCGCATA
ACTTTGCCGAGGACACGGTGTTCTTCAACCTGCCCAGTTTGTATGAGCCG
GCTGAGAGTATCTACGGCGTGTCCTGCTATCGCCAGATACGCGTGGAGAA
GCTAAAGATCCGGACAGCGGACCTCACGCGCAGCACCGTTCAGAAGTCCG
TTTGCATATTGGCCCGCCTGCCCATCTACGGGTACATCGAGGTGAAGCTA
GCCCTCATTGCCGATGCCTTTTTCGATCAGGGCGACTTCTCCGGCACGGA
ACTGCTGGCCAAGGCCTATCAGCAGCTAAATGCCTGCCTCCAGGACGACG
AGTCGCGCCGCCCGTTGCGCCACTTTCACGTGGGGCTGTCGCTGCGCGAG
ATCGTACTCCACTGGCGCCACAAGACGCTAATGCTCTTCAAACTAATGCT
GCTGCAGCGACGAGTGGTGTGTTTCGGTTCGCCCGTACGCCAAATGTGTG
TGCTGATCCTGGGCATGGCATCGCTGGTGCCGCGGCTGCTGGAGAAGGGC
TTCCAGGAGGTGGCCTGTGTGCGCACGTCGCGTCCCCTGTCGCCCATGCC
GGATTTCACTGACTCCCTGCAGCGGGAGGCGCAGGCCGAAGCCGAAGCGG
AACTGGAGGCAGTGGCTTCCGTAGCAGCTGCCACCGATGAGCAGAAACTG
ACGCCCGAGAGCGCCACAGCGGTGGAGGGCGAGGCCGAAGAGCTGGCCCT
CGTCTCATCCGCAGCGTCGGCGGGCGAGGAGCAGGTCAGTGGCGATGACA
CGTCGACGCGTTCCACGCCCAACTCACAGTCGCAGGACTCATCGAACGGC
AGGAACAGCTCGCTGACCAGAGAGGCCAGCGTGGACACACTAGCGTCCAA
CCTCGCCGCCTTGTGCGCTGTCAATCCGGATGAGTATCGGGCACCGGTCA
GCATCTTCGCCAGCGGCAACCTCTGCCTGCCGTATCTGTCGCTACCGTAC
ATGGACCTGCTCAGCGATCCCATGGTGCTCTCCTATGTCATCGGCACCTC
CAACGTGCTTTTCCAGCAGAAACGTCAGCTGGCTGACGTCCTGGTGGACA
TCGAGGCGGCCAATCTGGATGCCCACGATCCGGAGCTCAGGCGTCAGCTG
GTGCTGAGCACCGAGGATCTGCGCTACATGGACTACATCATGAAGCATGT
GCAATCGCCAAAGGAGGATGCCGAGGGCAGCGAGTACTGGATACGGGAGC
AGTTTCAGGGCTATATTCTCGCACTCTTGCGAACTGCTGTGGCTCCAGAT
GCCACGCCAAAGGACAACGATCATTTCAATGCGCACTTCATGGGCGCCTT
CAAGCGCACCCAATGCTTTCAGGAATGGTACGACGTTAGGCCCGAACCCG
AGTTCTTTGAGGCCCTGCCCGCTGGTCATCCCTTCGCCGGCACCTTGTCC
GTGGCGGACATGAAACTAAAACTAGCACAAACCATGCAAAATAGCGAGAG
TGGGCGAAAAATCAACCAGGCGGTAAACACGACGAGTCGTGCAGTGGGCG
GTGCCATATCCCAGGCCAAGGGCGCCTTCTCCAGCTGGTGGTCATCCATC
ACGACGGCCCCGCCCAATGCAACAAATGCAGGGCCTGCGACCAGCAGCTC
GAATGGGCAGGAAGGGGATGTAAGCGAAGGAGCTGCAGCCCAAGAGATCT
CAGTTACATTCCAGAATCATAAGGACGTCGAAGACCTTGACGTGGCGGGA
GTCAGCATCCACCTGGCTGGCCAGGAAGAGGCACACGAGTCGCACGAGTC
ACAGAGCGTCAGCTGCGACAAGCCGCAAGGCATCGTCGAGATTGGACGCG
AGGCGGAGCTGTTGGACAAAACTGCGCAATCGGAGGAGCCCAAGATTGCG
GCTGCAAGCCAAGCCGGTCGGCCAGGATGTGGCGGCGATGTGGCCACCTC
GGCCGTGGAGCGCAGCAGTGGCGATGTCTTCATTGTCTGAAAGCTTTCTA
GACCAT

BS04332.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:13:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG11178-RC 2124 CG11178-PC 1..2124 17..2140 10620 100 Plus
CG11178-RB 2124 CG11178-PB 1..2124 17..2140 10620 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11178-RC 3279 CG11178-RC 538..2661 17..2140 10620 100 Plus
CG11178-RB 3043 CG11178-RB 302..2425 17..2140 10620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13606445..13607474 17..1046 5150 100 Plus
X 23542271 X 13608401..13608911 1630..2140 2555 100 Plus
X 23542271 X 13607683..13608084 1047..1448 2010 100 Plus
X 23542271 X 13608149..13608332 1446..1629 920 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:12:59 has no hits.

BS04332.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:01 Download gff for BS04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG11178-RB 275..2397 17..2139 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:52 Download gff for BS04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG11178-RB 302..2424 17..2139 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:55:24 Download gff for BS04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG11178-RB 275..2397 17..2139 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:31 Download gff for BS04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG11178-RB 302..2424 17..2139 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:31 Download gff for BS04332.complete
Subject Subject Range Query Range Percent Splice Strand
X 13606445..13607474 17..1046 100 -> Plus
X 13607683..13608084 1047..1448 100 -> Plus
X 13608152..13608332 1449..1629 100 -> Plus
X 13608401..13608910 1630..2139 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:52 Download gff for BS04332.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13500478..13501507 17..1046 100 -> Plus
arm_X 13501716..13502117 1047..1448 100 -> Plus
arm_X 13502185..13502365 1449..1629 100 -> Plus
arm_X 13502434..13502943 1630..2139 100   Plus

BS04332.3prime Sequence

949 bp (835 high quality bases) assembled on 2005-12-01

> BS04332.3prime
ATGGTCTAGAAAGCTTTCAGACAATGAAGACATCGCCACTGCTGCGCTCC
ACGGCCGAGGTGGCCACATCGCCGCCACATCCTGGCCGACCGGCTTGGCT
TGCAGCCGCAATCTTGGGCTCCTCCGATTGCGCAGTTTTGTCCAACAGCT
CCGCCTCGCGTCCAATCTCGACGATGCCTTGCGGCTTGTCGCAGCTGACG
CTCTGTGACTCGTGCGACTCGTGTGCCTCTTCCTGGCCAGCCAGGTGGAT
GCTGACTCCCGCCACGTCAAGGTCTTCGACGTCCTTATGATTCTGGAATG
TAACTGAGATCTCTTGGGCTGCAGCTCCTTCGCTTACATCCCCTTCCTGC
CCATTCGAGCTGCTGGTCGCAGGCCCTGCATTTGTTGCATTGGGCGGGGC
CGTCGTGATGGATGACCACCAGCTGGAGAAGGCGCCCTTGGCCTGGGATA
TGGCACCGCCCACTGCACGACTCGTCGTGTTTACCGCCTGGTTGATTTTT
CGCCCACTCTCGCTATTTTGCATGGTTTGTGCTAGTTTTAGTTTCATGTC
CGCCACGGACAAGGTGCCGGCGAAGGGATGACCAGCGGGCAGGGCCTCAA
AGAACTCGGGTTCGGGCCTAACGTCGTACCATTCCTGAAAGCATTGGGTG
CGCTTGAAGGCGCCCATGAAGTGCGCATTGAAATGATCGTTGTCCTTTGG
CGTGGCATCTGGAGCCACAGCAGTTCGCAAGAGTGCGAGAATATAGCCCT
GAAACTGCTCCCGTATCCAGTACTCGCTGCCCTCGGCATCCTCCTTTGGC
GATTGCACATGCTTCATGATGTAGTCCATGTAGCGCAGATCCTCGGTGCT
CAGCACCAGCTGACGCCTGAGCTCCGGATCGTGGGCATCCAGATTGGCCG
CCTCGATGTCCACCAGGACGTCAGCCAGCTGACGTTTCTGCTGGAAAAG

BS04332.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11178-PA 2124 CG11178-RA 1192..2124 949..17 4665 100 Minus
CG11178-PB 2124 CG11178-RB 1192..2124 949..17 4665 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG11178-RC 3279 CG11178-RC 1729..2661 949..17 4665 100 Minus
CG11178-RB 3043 CG11178-RB 1493..2425 949..17 4665 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13608401..13608911 527..17 2555 100 Minus
X 23542271 X 13607844..13608084 949..709 1205 100 Minus
X 23542271 X 13608149..13608332 711..528 920 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:35:13 has no hits.

BS04332.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:45:35 Download gff for BS04332.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11178-PA 1192..2124 17..949 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:06:06 Download gff for BS04332.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11178-PB 1192..2124 17..949 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:27:26 Download gff for BS04332.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11178-RB 1493..2432 10..949 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:58:34 Download gff for BS04332.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11178-RB 1493..2432 10..949 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:58:34 Download gff for BS04332.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13607844..13608084 709..949 100 -> Minus
X 13608152..13608332 528..708 100 -> Minus
X 13608401..13608918 10..527 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:27:26 Download gff for BS04332.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13501877..13502117 709..949 100 -> Minus
arm_X 13502185..13502365 528..708 100 -> Minus
arm_X 13502434..13502951 10..527 99   Minus

BS04332.5prime Sequence

886 bp (838 high quality bases) assembled on 2005-12-01

> BS04332.5prime
GAAGTTATCAGTCGACATGGCCAGCGAGCCGGAGAACAAGCCACCGATCC
TGCACATCCTCGTGGTGGGCTTCCACCACAAGCTGGGCTGCCAGGTGGAG
TTCTCGCATCCGCCGCTAATCTCGGGCTCCACGGGACGCAACGAATGCCC
CTCCGGCTGGAAGTACCTGCCCACTCTGGCTCTGCCCGACGGCTCGCATA
ACTTTGCCGAGGACACGGTGTTCTTCAACCTGCCCAGTTTGTATGAGCCG
GCTGAGAGTATCTACGGCGTGTCCTGCTATCGCCAGATACGCGTGGAGAA
GCTAAAGATCCGGACAGCGGACCTCACGCGCAGCACCGTTCAGAAGTCCG
TTTGCATATTGGCCCGCCTGCCCATCTACGGGTACATCGAGGTGAAGCTA
GCCCTCATTGCCGATGCCTTTTTCGATCAGGGCGACTTCTCCGGCACGGA
ACTGCTGGCCAAGGCCTATCAGCAGCTAAATGCCTGCCTCCAGGACGACG
AGTCGCGCCGCCCGTTGCGCCACTTTCACGTGGGGCTGTCGCTGCGCGAG
ATCGTACTCCACTGGCGCCACAAGACGCTAATGCTCTTCAAACTAATGCT
GCTGCAGCGACGAGTGGTGTGTTTCGGTTCGCCCGTACGCCAAATGTGTG
TGCTGATCCTGGGCATGGCATCGCTGGTGCCGCGGCTGCTGGAGAAGGGC
TTCCAGGAGGTGGCCTGTGTGCGCACGTCGCGTCCCCTGTCGCCCATGCC
GGATTTCACTGACTCCCTGCAGCGGGAGGCGCAGGCCGAAGCCGAAGCGG
AACTGGAGGCAGTGGCTTCCGTAGCAGCTGCCACCGATGAGCAGAAACTG
ACGCCCGAGAGCGCCACAGGCGGTGGAGGGCGAGGC

BS04332.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG11178-PA 2124 CG11178-RA 1..853 17..869 4265 100 Plus
CG11178-PB 2124 CG11178-RB 1..853 17..869 4265 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:33:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG11178-RC 3279 CG11178-RC 538..1406 17..886 4325 99.9 Plus
CG11178-RB 3043 CG11178-RB 302..1170 17..886 4325 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13606445..13607313 17..886 4300 99.9 Plus
Blast to na_te.dros performed on 2015-02-12 01:33:36 has no hits.

BS04332.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:45:36 Download gff for BS04332.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11178-PA 1..869 17..886 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:06:07 Download gff for BS04332.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11178-PB 1..869 17..886 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:01:59 Download gff for BS04332.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11178-RB 297..1170 9..886 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:29:14 Download gff for BS04332.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11178-RB 297..1170 9..886 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:29:14 Download gff for BS04332.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13606440..13607313 9..886 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:01:59 Download gff for BS04332.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13500473..13501346 9..886 99   Plus

BS04332.pep Sequence

Translation from 16 to 2139

> BS04332.pep
MASEPENKPPILHILVVGFHHKLGCQVEFSHPPLISGSTGRNECPSGWKY
LPTLALPDGSHNFAEDTVFFNLPSLYEPAESIYGVSCYRQIRVEKLKIRT
ADLTRSTVQKSVCILARLPIYGYIEVKLALIADAFFDQGDFSGTELLAKA
YQQLNACLQDDESRRPLRHFHVGLSLREIVLHWRHKTLMLFKLMLLQRRV
VCFGSPVRQMCVLILGMASLVPRLLEKGFQEVACVRTSRPLSPMPDFTDS
LQREAQAEAEAELEAVASVAAATDEQKLTPESATAVEGEAEELALVSSAA
SAGEEQVSGDDTSTRSTPNSQSQDSSNGRNSSLTREASVDTLASNLAALC
AVNPDEYRAPVSIFASGNLCLPYLSLPYMDLLSDPMVLSYVIGTSNVLFQ
QKRQLADVLVDIEAANLDAHDPELRRQLVLSTEDLRYMDYIMKHVQSPKE
DAEGSEYWIREQFQGYILALLRTAVAPDATPKDNDHFNAHFMGAFKRTQC
FQEWYDVRPEPEFFEALPAGHPFAGTLSVADMKLKLAQTMQNSESGRKIN
QAVNTTSRAVGGAISQAKGAFSSWWSSITTAPPNATNAGPATSSSNGQEG
DVSEGAAAQEISVTFQNHKDVEDLDVAGVSIHLAGQEEAHESHESQSVSC
DKPQGIVEIGREAELLDKTAQSEEPKIAAASQAGRPGCGGDVATSAVERS
SGDVFIV*

BS04332.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:47:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11178-PC 707 CG11178-PC 1..707 1..707 3624 100 Plus
CG11178-PB 707 CG11178-PB 1..707 1..707 3624 100 Plus