Clone Sequence Records
BS04445.3prime Sequence
864 bp (863 high quality bases) assembled on 2005-12-01
> BS04445.3prime
ATGGTCTAGAAAGCTTTTAGCGCGCGTGATTCTTGCAGAAGGGACGTCCG
CCCTTGTTGTAGAAGCTCTGACCCTCCAGGTTCTGTTTGCAGAACGTGCA
GTTGAAGCATTGGCTATGGTAGTTGTGGTTCAAGGCCTCCACCCATCTGT
CGCCAGCTTCCACGGGGAAGCCGCAGGCGAAGCACTTGGTGGTGAACAAC
TCGTTCCAATCGGCCTCGCAGTACGCGTTTCCATCCTCCAGGAAGAAGGG
CCTGTTGCCAAAGATCTTGCCGCACTGGCCGCAGGTGAAGCACTCCGGAT
GGAAGTGTTTGCCAATGGCATTCAAACAGTCACCCTTGATCTTGCCAGCG
CACTTGCTGCAAGTGGGCGCCAGGTACTTCTCGAAACAGTACTCGCAGTA
CAGATCGCCCTTCTCCTCAACGAATCCAATGTCCTGCAGCGGACGACGGC
AGTTGCCGTTCACGCAGATGAAATGATCCGGGCACCAGATGCGGCCCAAT
GCCGTGATAAAGGGTCCTCTGATCTGCACATTGCAGCTGTTGCACAGTGG
GATGCGCACTCCGGGTCCGGCTGCCTTATTCAGGATACCCCTGCCCCTCT
TGGGCGCCGAGGTGGCTCCAAAGGCGCCAGCGCTCTTTCCTCCGGCACCT
CGGTACACATTATTATTGTTGTAGTTGCTATAGTTGTTGTTATTGTAGCT
GTTGCTGCTGCTATAGTTGTTGGTGTTGGAGGTGATGTAGGGGGACTGAC
TCGGGGTGCTATAATTAGATCCCATGGGGTAAGAGTTCCTATACTGCTGC
TTCTGCTGATTGTTGTATTGCTGCTGCTGTTGTTGCTGTTGTTGGTACCT
TACATTACGACCTT
BS04445.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:48:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30084-PG | 2673 | CG30084-RG | 1826..2673 | 864..17 | 4240 | 100 | Minus |
| CG30084-PE | 2343 | CG30084-RE | 1496..2343 | 864..17 | 4240 | 100 | Minus |
| CG30084-PC | 3249 | CG30084-RC | 2402..3249 | 864..17 | 4240 | 100 | Minus |
| CG30084-PF | 4149 | CG30084-RF | 3517..4149 | 649..17 | 3165 | 100 | Minus |
| CG30084-PA | 3591 | CG30084-RA | 3090..3591 | 518..17 | 2510 | 100 | Minus |
| CG1133-PA | 1830 | opa-RA | 142..168 | 844..818 | 135 | 100 | Minus |
| CG32677-PA | 5439 | CG32677-RA | 412..438 | 844..818 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp52-RG | 3506 | CG30084-RG | 2031..2878 | 864..17 | 4240 | 100 | Minus |
| Zasp52-RE | 3176 | CG30084-RE | 1701..2548 | 864..17 | 4240 | 100 | Minus |
| Zasp52-RC | 4138 | CG30084-RC | 2663..3510 | 864..17 | 4240 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:24:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15763350..15763591 | 95..336 | 1210 | 100 | Plus |
| 2R | 25286936 | 2R | 15773039..15773255 | 647..863 | 1085 | 100 | Plus |
| 2R | 25286936 | 2R | 15763645..15763832 | 334..521 | 940 | 100 | Plus |
| 2R | 25286936 | 2R | 15765123..15765254 | 519..650 | 660 | 100 | Plus |
| 2R | 25286936 | 2R | 15763193..15763271 | 17..95 | 395 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 19:24:59 has no hits.
BS04445.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:48:36 Download gff for
BS04445.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30084-PE | 1496..2343 | 17..864 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:10:06 Download gff for
BS04445.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30084-PG | 1826..2673 | 17..864 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:20:17 Download gff for
BS04445.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp52-RC | 2663..3512 | 13..864 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:39:06 Download gff for
BS04445.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp52-RC | 2663..3512 | 13..864 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:39:06 Download gff for
BS04445.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15763350..15763589 | 95..334 | 100 | <- | Plus |
| 2R | 15763646..15763829 | 335..518 | 100 | <- | Plus |
| 2R | 15765123..15765252 | 519..648 | 100 | <- | Plus |
| 2R | 15773041..15773255 | 649..864 | 99 | | Plus |
| 2R | 15763191..15763270 | 13..94 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:20:17 Download gff for
BS04445.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11650696..11650775 | 13..94 | 97 | <- | Plus |
| arm_2R | 11650855..11651094 | 95..334 | 100 | <- | Plus |
| arm_2R | 11651151..11651334 | 335..518 | 100 | <- | Plus |
| arm_2R | 11652628..11652757 | 519..648 | 100 | <- | Plus |
| arm_2R | 11660546..11660760 | 649..864 | 99 | | Plus |
BS04445.5prime Sequence
861 bp (741 high quality bases) assembled on 2005-12-01
> BS04445.5prime
GAAGTTATCAGTCGACATGGCCCAACCACAGCTGCTGCAAATCAAATTGT
CACGTTTCGATGCCCAACCCTGGGGATTCCGCCTTCAGGGGGGCACGGAC
TTCGCTCAGCCCCTGCTGGTGCAAAAGGTGAACGCCGGCAGCTTGTCCGA
GCAGGCTGGCCTCCAGCCCGGCGATGCGGTGGTCAAGATCAATGACGTGG
ATGTCTTCAATCTGCGTCACAAGGATGCCCAGGACATTGTGGTGCGCTCC
GGCAACAACTTTGTCATCACAGTGCAGCGCGGTGGCTCCACCTGGCGCCC
GCATGTGACACCGACTGGCAATGTGCCGCAGCCCAACTCGCCGTATCTGC
AGACGGTGACGAAGACCTCTCTGGCTCACAAACAACAGGACAGCCAGCAC
ATCGGCTGTGGCTACAACAACGCGGCCCGTCCCTTCTCCAACGGCGGCGA
TGGCGGCGTGAAGAGCATTGTCAATAAACAATACAACACCCCGGTTGGCA
TTTACAGCGATGAATCTATTGCGGAAACACTCTCGGCCCAGGCGGAGGTT
TTGGCTGGCGGTGTGCTCGGCGTCAACTTCAAGAAGAACGAGAAGGAATA
CCAGGGCGATCGCTCCGAGGTTCTGAAGTTCCTGCGCGAGGAGGAGACCG
GCCAGTCCACTCCAGAACCACACAGTCCCGCCAACTTCTACTGGACACAG
AGCCACGCAATCGGCGGCAACGAGCGACGCACTCCACTGCACCACCAGCA
CCAGCAGCCTCAGCAGGATGAGCGGATTGGTGTACCATTGCAGTCAAATA
CACTGGCGCCGGAGGCGACACACAGGCCCAGCTTGCCGGTGGCCCCGAAG
GATAACGAGGA
BS04445.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30084-PG | 2673 | CG30084-RG | 1..845 | 17..861 | 4225 | 100 | Plus |
| CG30084-PE | 2343 | CG30084-RE | 1..845 | 17..861 | 4225 | 100 | Plus |
| CG30084-PA | 3591 | CG30084-RA | 1..649 | 17..665 | 3245 | 100 | Plus |
| CG30084-PF | 4149 | CG30084-RF | 1..649 | 17..665 | 3245 | 100 | Plus |
| CG30084-PC | 3249 | CG30084-RC | 1..649 | 17..665 | 3245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:42:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp52-RV | 3701 | CG37-RV | 206..1050 | 17..861 | 4225 | 100 | Plus |
| Zasp52-RO | 1963 | CG37-RO | 206..1050 | 17..861 | 4225 | 100 | Plus |
| Zasp52-RN | 4637 | CG37-RN | 206..1050 | 17..861 | 4225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15779463..15779661 | 861..663 | 995 | 100 | Minus |
| 2R | 25286936 | 2R | 15783088..15783245 | 436..279 | 790 | 100 | Minus |
| 2R | 25286936 | 2R | 15783315..15783468 | 279..126 | 770 | 100 | Minus |
| 2R | 25286936 | 2R | 15781773..15781906 | 570..437 | 670 | 100 | Minus |
| 2R | 25286936 | 2R | 15803359..15803471 | 129..17 | 565 | 100 | Minus |
| 2R | 25286936 | 2R | 15780985..15781080 | 665..570 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:42:36 has no hits.
BS04445.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:48:37 Download gff for
BS04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30084-PE | 1..844 | 17..860 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:10:07 Download gff for
BS04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30084-PE | 1..844 | 17..860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:49:07 Download gff for
BS04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp52-RN | 201..1049 | 10..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:43:36 Download gff for
BS04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp52-RN | 201..1049 | 10..860 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:43:36 Download gff for
BS04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15780985..15781079 | 571..665 | 100 | <- | Minus |
| 2R | 15781773..15781906 | 437..570 | 100 | <- | Minus |
| 2R | 15783088..15783244 | 280..436 | 100 | <- | Minus |
| 2R | 15783315..15783466 | 128..279 | 100 | <- | Minus |
| 2R | 15803361..15803476 | 10..127 | 96 | | Minus |
| 2R | 15779464..15779658 | 666..860 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:49:07 Download gff for
BS04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11666969..11667163 | 666..860 | 100 | <- | Minus |
| arm_2R | 11668490..11668584 | 571..665 | 100 | <- | Minus |
| arm_2R | 11669278..11669411 | 437..570 | 100 | <- | Minus |
| arm_2R | 11670593..11670749 | 280..436 | 100 | <- | Minus |
| arm_2R | 11670820..11670971 | 128..279 | 100 | <- | Minus |
| arm_2R | 11690866..11690981 | 10..127 | 96 | | Minus |
BS04445.complete Sequence
2705 bp assembled on 2008-08-15
GenBank Submission: KX800058
> BS04445.complete
GAAGTTATCAGTCGACATGGCCCAACCACAGCTGCTGCAAATCAAATTGT
CACGTTTCGATGCCCAACCCTGGGGATTCCGCCTTCAGGGGGGCACGGAC
TTCGCTCAGCCCCTGCTGGTGCAAAAGGTGAACGCCGGCAGCTTGTCCGA
GCAGGCTGGCCTCCAGCCCGGCGATGCGGTGGTCAAGATCAATGACGTGG
ATGTCTTCAATCTGCGTCACAAGGATGCCCAGGACATTGTGGTGCGCTCC
GGCAACAACTTTGTCATCACAGTGCAGCGCGGTGGCTCCACCTGGCGCCC
GCATGTGACACCGACTGGCAATGTGCCGCAGCCCAACTCGCCGTATCTGC
AGACGGTGACGAAGACCTCTCTGGCTCACAAACAACAGGACAGCCAGCAC
ATCGGCTGTGGCTACAACAACGCGGCCCGTCCCTTCTCCAACGGCGGCGA
TGGCGGCGTGAAGAGCATTGTCAATAAACAATACAACACCCCGGTTGGCA
TTTACAGCGATGAATCTATTGCGGAAACACTCTCGGCCCAGGCGGAGGTT
TTGGCTGGCGGTGTGCTCGGCGTCAACTTCAAGAAGAACGAGAAGGAATA
CCAGGGCGATCGCTCCGAGGTTCTGAAGTTCCTGCGCGAGGAGGAGACCG
GCCAGTCCACTCCAGAACCACACAGTCCCGCCAACTTCTACTGGACACAG
AGCCACGCAATCGGCGGCAACGAGCGACGCACTCCACTGCACCACCAGCA
CCAGCAGCCTCAGCAGGATGAGCGGATTGGTGTACCATTGCAGTCAAATA
CACTGGCGCCGGAGGCGACACACAGGCCCAGCTTGCCGGTGGCCCCGAAG
GATAACGAGGAGCAGGCCAGACAGGATCAGCAGGAGCAGCCCGATCCGCG
CATCATTGTGCTGCCCATCTGCCCCGGCCTCCAGGGGCCCGAGTATAAGG
CTGAAATGGAGGCTGCAGCCGCGGCACTGGCCACCGACCAGGATGGACGA
CCACGTCCATTGGCCGCCAGCGGACATCCGGCCTGCCAGCTGTGCGGCGT
GGGCATTGTTGGCGTTTTCGTGCGCATCAAGGATAAGAACCTGCACGTGG
AGTGCTTCAAGTGTGCCACGTGTGGCACCTCGCTGAAGAACCAGGGCTAC
TACAACTTCAACAACAAGCTCTACTGCGACATCCACGCCAAACAGGCCGC
CATCAACAATCCCCCCACCGGCACCGAGGGCTACGTCCCCGTTCCCATCA
AGCCCAACACCAAGCTGAGTGCCTCCACCATCTCATCGGCCTTGAACTCG
CACGGATACGGTGGCCACTCGAACGGCTACTCCAATGGAAACTCCACCCC
TGCTCCGGCACCGGTTGCAAGCTCTCAAGCAACAGCAACAGTAGCAACGG
TAGCACCATCCGCTGCAACAGCAGCAACTGCAGCAGCAACACCCCAAGCA
GCAACTGCAACAGATAGCCCAGCTGCAACAGCATCATCATCAGACAATAT
GTCGGCCTACGTGGCAGATGAGCCCTCTTCGATTTATGGCCAAATTAGCG
CTGAATCGGTGGCATTGGCCCCACCACCACCACAGCCACCCACTGCCGGC
GGGGGCGATCAGCCCTTTGAGTACGTCACGCTCACCGGCAACGTCATCCG
CAGCGTGCAGGCTCCCGGAAAGGGGGCGTGCCCCAGCTACAAGGTGAACC
AGGGCTATGCTCGTCCGTTCGGTGCCGCCGCTCCCAAGTCGCCGGTGTCG
TATCCGCCGCAGCAGCAACAGCAGTCGCCGCGTCCCGCTCCCGGTGGCCA
AAACCCGTACGCCACCCTGCCCCGCAGCAATGTGGGCCAACAAGGTCGTA
ATGTAAGGTACCAACAACAGCAACAACAGCAGCAGCAATACAACAATCAG
CAGAAGCAGCAGTATAGGAACTCTTACCCCATGGGATCTAATTATAGCAC
CCCGAGTCAGTCCCCCTACATCACCTCCAACACCAACAACTATAGCAGCA
GCAACAGCTACAATAACAACAACTATAGCAACTACAACAATAATAATGTG
TACCGAGGTGCCGGAGGAAAGAGCGCTGGCGCCTTTGGAGCCACCTCGGC
GCCCAAGAGGGGCAGGGGTATCCTGAATAAGGCAGCCGGACCCGGAGTGC
GCATCCCACTGTGCAACAGCTGCAATGTGCAGATCAGAGGACCCTTTATC
ACGGCATTGGGCCGCATCTGGTGCCCGGATCATTTCATCTGCGTGAACGG
CAACTGCCGTCGTCCGCTGCAGGACATTGGATTCGTTGAGGAGAAGGGCG
ATCTGTACTGCGAGTACTGTTTCGAGAAGTACCTGGCGCCCACTTGCAGC
AAGTGCGCTGGCAAGATCAAGGGTGACTGTTTGAATGCCATTGGCAAACA
CTTCCATCCGGAGTGCTTCACCTGCGGCCAGTGCGGCAAGATCTTTGGCA
ACAGGCCCTTCTTCCTGGAGGATGGAAACGCGTACTGCGAGGCCGATTGG
AACGAGTTGTTCACCACCAAGTGCTTCGCCTGCGGCTTCCCCGTGGAAGC
TGGCGACAGATGGGTGGAGGCCTTGAACCACAACTACCATAGCCAATGCT
TCAACTGCACGTTCTGCAAACAGAACCTGGAGGGTCAGAGCTTCTACAAC
AAGGGCGGACGTCCCTTCTGCAAGAATCACGCGCGCTAAAAGCTTTCTAG
ACCAT
BS04445.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:20:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp52-RG | 2673 | CG30084-PG | 1..2673 | 17..2689 | 13365 | 100 | Plus |
| Zasp52-RV | 2868 | CG30084-PV | 1..2041 | 17..2057 | 10205 | 100 | Plus |
| Zasp52-RO | 1548 | CG30084-PO | 1..1349 | 17..1365 | 6745 | 100 | Plus |
| Zasp52-RV | 2868 | CG30084-PV | 2235..2868 | 2056..2689 | 3170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:20:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp52-RG | 3506 | CG30084-RG | 206..2878 | 17..2689 | 13365 | 100 | Plus |
| Zasp52-RV | 3701 | CG37-RV | 206..2246 | 17..2057 | 10205 | 100 | Plus |
| Zasp52-RO | 1963 | CG37-RO | 206..1554 | 17..1365 | 6745 | 100 | Plus |
| Zasp52-RV | 3701 | CG37-RV | 2440..3073 | 2056..2689 | 3170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:20:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15779265..15779661 | 1059..663 | 1985 | 100 | Minus |
| 2R | 25286936 | 2R | 15774420..15774758 | 1701..1363 | 1680 | 99.7 | Minus |
| 2R | 25286936 | 2R | 15763350..15763591 | 2611..2370 | 1210 | 100 | Minus |
| 2R | 25286936 | 2R | 15773039..15773255 | 2059..1843 | 1085 | 100 | Minus |
| 2R | 25286936 | 2R | 15778352..15778546 | 1254..1060 | 975 | 100 | Minus |
| 2R | 25286936 | 2R | 15763645..15763832 | 2372..2185 | 940 | 100 | Minus |
| 2R | 25286936 | 2R | 15783088..15783245 | 436..279 | 790 | 100 | Minus |
| 2R | 25286936 | 2R | 15773814..15773969 | 1846..1691 | 780 | 100 | Minus |
| 2R | 25286936 | 2R | 15783315..15783468 | 279..126 | 770 | 100 | Minus |
| 2R | 25286936 | 2R | 15781773..15781906 | 570..437 | 670 | 100 | Minus |
| 2R | 25286936 | 2R | 15765123..15765254 | 2187..2056 | 660 | 100 | Minus |
| 2R | 25286936 | 2R | 15803359..15803471 | 129..17 | 565 | 100 | Minus |
| 2R | 25286936 | 2R | 15777176..15777286 | 1365..1255 | 555 | 100 | Minus |
| 2R | 25286936 | 2R | 15780985..15781080 | 665..570 | 480 | 100 | Minus |
| 2R | 25286936 | 2R | 15763193..15763271 | 2689..2611 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:20:41 has no hits.
BS04445.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:22:12 Download gff for
BS04445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp-RG | 181..2860 | 10..2693 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:50:24 Download gff for
BS04445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp52-RG | 206..2876 | 17..2687 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:15:40 Download gff for
BS04445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30084-RG | 186..2856 | 17..2687 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:18:47 Download gff for
BS04445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp52-RG | 206..2876 | 17..2687 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:18:47 Download gff for
BS04445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15773041..15773253 | 1845..2057 | 100 | <- | Minus |
| 2R | 15765123..15765252 | 2058..2187 | 100 | <- | Minus |
| 2R | 15777178..15777286 | 1255..1363 | 100 | <- | Minus |
| 2R | 15778352..15778546 | 1060..1254 | 100 | <- | Minus |
| 2R | 15763195..15763270 | 2612..2687 | 100 | <- | Minus |
| 2R | 15763350..15763589 | 2372..2611 | 100 | <- | Minus |
| 2R | 15763646..15763829 | 2188..2371 | 100 | <- | Minus |
| 2R | 15773816..15773966 | 1694..1844 | 100 | <- | Minus |
| 2R | 15774428..15774757 | 1364..1693 | 100 | <- | Minus |
| 2R | 15779265..15779658 | 666..1059 | 100 | <- | Minus |
| 2R | 15780985..15781079 | 571..665 | 100 | <- | Minus |
| 2R | 15781773..15781906 | 437..570 | 100 | <- | Minus |
| 2R | 15783088..15783244 | 280..436 | 100 | <- | Minus |
| 2R | 15783315..15783466 | 128..279 | 100 | <- | Minus |
| 2R | 15803361..15803471 | 17..127 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:50:24 Download gff for
BS04445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11670593..11670749 | 280..436 | 100 | <- | Minus |
| arm_2R | 11670820..11670971 | 128..279 | 100 | <- | Minus |
| arm_2R | 11690866..11690976 | 17..127 | 100 | | Minus |
| arm_2R | 11666770..11667163 | 666..1059 | 100 | <- | Minus |
| arm_2R | 11650700..11650775 | 2612..2687 | 100 | <- | Minus |
| arm_2R | 11650855..11651094 | 2372..2611 | 100 | <- | Minus |
| arm_2R | 11651151..11651334 | 2188..2371 | 100 | <- | Minus |
| arm_2R | 11652628..11652757 | 2058..2187 | 100 | <- | Minus |
| arm_2R | 11660546..11660758 | 1845..2057 | 100 | <- | Minus |
| arm_2R | 11661321..11661471 | 1694..1844 | 100 | <- | Minus |
| arm_2R | 11661933..11662262 | 1364..1693 | 100 | <- | Minus |
| arm_2R | 11664683..11664791 | 1255..1363 | 100 | <- | Minus |
| arm_2R | 11665857..11666051 | 1060..1254 | 100 | <- | Minus |
| arm_2R | 11668490..11668584 | 571..665 | 100 | <- | Minus |
| arm_2R | 11669278..11669411 | 437..570 | 100 | <- | Minus |
BS04445.pep Sequence
Translation from 16 to 2688
> BS04445.pep
MAQPQLLQIKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPEPHSPANFYWTQSHAIGGNERRTPLHHQHQQPQQ
DERIGVPLQSNTLAPEATHRPSLPVAPKDNEEQARQDQQEQPDPRIIVLP
ICPGLQGPEYKAEMEAAAAALATDQDGRPRPLAASGHPACQLCGVGIVGV
FVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPP
TGTEGYVPVPIKPNTKLSASTISSALNSHGYGGHSNGYSNGNSTPAPAPV
ASSQATATVATVAPSAATAATAAATPQAATATDSPAATASSSDNMSAYVA
DEPSSIYGQISAESVALAPPPPQPPTAGGGDQPFEYVTLTGNVIRSVQAP
GKGACPSYKVNQGYARPFGAAAPKSPVSYPPQQQQQSPRPAPGGQNPYAT
LPRSNVGQQGRNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSP
YITSNTNNYSSSNSYNNNNYSNYNNNNVYRGAGGKSAGAFGATSAPKRGR
GILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRP
LQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPEC
FTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWV
EALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHAR*
BS04445.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:36:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp52-PG | 890 | CG30084-PG | 1..890 | 1..890 | 4820 | 100 | Plus |
| Zasp52-PV | 955 | CG30084-PV | 1..955 | 1..890 | 4051 | 82.5 | Plus |
| Zasp52-PE | 780 | CG30084-PE | 1..780 | 1..890 | 3623 | 79.4 | Plus |
| Zasp52-PL | 897 | CG30084-PL | 1..897 | 1..890 | 3318 | 70.8 | Plus |
| Zasp52-PR | 722 | CG30084-PR | 1..722 | 1..890 | 2890 | 66.8 | Plus |
