Clone Sequence Records
BS04451.3prime Sequence
949 bp (873 high quality bases) assembled on 2005-12-01
> BS04451.3prime
ATGGTCTAGAAAGCTTCTACTCATCTTCTCCCACTGAACCCTTTATGATT
CCTTTACCATAATAAGCAGTGAGCGCAACCATTCGGGTGTCCAGATAGTT
GTGCTCCACCTCGCACTGCTGCCCAACTCCACTTAGAGCGACCACCTGCT
TCATATTGGCGTTGCGTGGCAGAAAGAAAGCTACGTCAGATGCCAGGCTA
CGGGACAGCTGCATCAGTTGGCTAGCACCCACGGGCAGGAGACCTGTTTC
GATATCAAAGGTGGCCTGCTTTTGGTAGTCAGGACCACCCCACGGAGGGC
TCAGGAAAACCACATTTGGGCGCAGCTTTGTGCTGGCCGCAAACTGCAGA
AAATCGGCGTGGATAAACTCGATCTTATGGGCCACACCATAAATGCCGGC
ATTATGCTTGGCCATGGCCAACTTCTCGGCATCGATGTCCACAGCAATTA
CGCGTCCACAGGTGTTTGCAAACTGAATGGCATTGCCGCCGCATCCACAG
AAAGCATCTACGATCACGTCGCAGGCCAGTCGTCGGGCCGTTTGTTTGGC
AATCTTCTCGGGTGTCACCGAGAACCAGCTCTCGCGGTCCAGCCGAATGC
CCTGATCGAAGCGGGAGAACAGCGAGAATCGCTTGACCCAGTACTTGACC
ATTTTGTTGTTATCCTCTTGCATGCACTCTGGCATCCTGGCCTTGAGTTT
TTTTATTTGCCTTTGCCGTCGTTTTTTCTTTTTAACAGAACCGCTCTGAA
CGCCGTGCAGAGCCTCGTTTTCGTTGTTCTCCATGGTCAACAGATCATGA
TCGTCCTCGCTATCGCTGCTAGATAGTTCGTACTGTGTCTTTCTTTCCTT
TCTATAATTAATTATATCTGCCTTCGACGCAAATGATGTTGGCAATCCGA
GAAGGCGCAGCTGTTGTTCCTCGTCACAATCCTCGGGGATCGTCGTTGG
BS04451.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31241-PA | 1476 | CG31241-RA | 556..1476 | 937..17 | 4605 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 13:22:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 2089 | CG44890-RB | 1089..2020 | 949..17 | 4640 | 99.9 | Minus |
| moi-RA | 2089 | CG42350-RA | 1089..2020 | 949..17 | 4640 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 13:22:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18256677..18257608 | 949..17 | 4615 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-03 13:22:49 has no hits.
BS04451.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:48:46 Download gff for
BS04451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-PA | 545..1476 | 17..949 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:10:20 Download gff for
BS04451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-PA | 545..1476 | 17..949 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:59:41 Download gff for
BS04451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgs1-RB | 1089..2024 | 11..949 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:48:52 Download gff for
BS04451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| moi-RA | 1089..2024 | 11..949 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:48:52 Download gff for
BS04451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18256677..18257610 | 14..949 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:59:41 Download gff for
BS04451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14082399..14083332 | 14..949 | 99 | -> | Minus |
BS04451.5prime Sequence
933 bp (775 high quality bases) assembled on 2005-12-01
> BS04451.5prime
GAAGTTATCAGTCGACATGGTACATCCAGGTCATCGACAGAGCCGAGGAC
TTGCTGACTCGCAGGCTGGAGATGAGAAGTCTGATCGAGAAATGAACACA
CACCACCTGACCACCTCGCGAACCAATCCGCAGTTCTATATATTCAGTCA
GCTCTTTGGTAACGATTTCGACTGGAATAATTGCAATTGGGGGGGCATTC
AAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTC
GAGCAAAAGTGGCACAAGCGGTTTCCCGAATACAAAGATCTTATCGAGGT
GGTTTCGTCGGAGGAGCAAGGCCTTTGGCAGGAACTGTGGGAGAAGCACG
CCAGCGATTACAGTGAAAAGTTCTGGTATATATTTAGCTGTGCCTTTGAG
AACTACCAACACGATTTGGCCAAATCATTTGGCCTTGACGTCGCTGAAAA
CTCAGAAGATGTTGAGGAGGACTTGCAGAACCTAAGCCTTACAAATAAGC
CAATAAAATCGAAACAGCAAAGGGTCACAGAGAAAGAGGAGGACGAATCA
TACTTGACTGCCAACGACGATCCCGAGGATTGTGACGAGGAACAACAGCT
GCGCCTTCTCGGATTGCCAACATCATTTGCGTCGAAGGCAGATATAATTA
ATTATAGAAAGGAAAGAAAGACACAGTACGAACTATCTAGCAGCGATAGC
GAGGACGATCATGATCTGTTGACCATGGAGAACAACGAAAACGAGGCTCT
GCACGGCGTTCAGAGCGGTTCTGTTAAAAAGAAAAAACGACGGCGAAGGC
AAATAAAAAAACTCAAGGCCAGGATGCCAGAGTGCATGCAAGAGGATAAC
AACAAAATGGTCAAGTACTGGGTCAAGCGATTCTCGCTGTTCTCCCGCTT
CGATCAGGGCATTCGGCTGGGACCGCGAGAGCT
BS04451.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31241-PA | 1476 | CG31241-RA | 1..904 | 17..920 | 4495 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:00:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 2089 | CG44890-RB | 545..1460 | 17..933 | 4545 | 99.8 | Plus |
| moi-RA | 2089 | CG42350-RA | 545..1460 | 17..933 | 4545 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:00:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18256133..18257048 | 17..933 | 4520 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:00:50 has no hits.
BS04451.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:48:47 Download gff for
BS04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-PA | 1..916 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:10:22 Download gff for
BS04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-PA | 1..916 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:44:07 Download gff for
BS04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgs1-RB | 536..1460 | 9..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:01:53 Download gff for
BS04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| moi-RA | 536..1460 | 9..933 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:01:53 Download gff for
BS04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18256124..18257048 | 9..933 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:44:07 Download gff for
BS04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14081846..14082770 | 9..933 | 99 | | Plus |
BS04451.complete Sequence
1508 bp (1508 high quality bases) assembled on 2005-09-13
GenBank Submission: FJ634944
> BS04451.complete
GAAGTTATCAGTCGACATGGTACATCCAGGTCATCGACAGAGCCGAGGAC
TTGCTGACTCGCAGGCTGGAGATGAGAAGTCTGATCGAGAAATGAACACA
CACCACCTGACCACCTCGCGAACCAATCCGCAGTTCTATATATTCAGTCA
GCTCTTTGGTAACGATTTCGACTGGAATAATTGCAATTGGGGGGGCATTC
AAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTC
GAGCAAAAGTGGCACAAGCGGTTTCCCGAATACAAAGATCTTATCGAGGT
GGTTTCGTCGGAGGAGCAAGGCCTTTGGCAGGAACTGTGGGAGAAGCACG
CCAGCGATTACAGTGAAAAGTTCTGGTATATATTTAGCTGTGCCTTTGAG
AACTACCAACACGATTTGGCCAAATCATTTGGCCTTGACGTCGCTGAAAA
CTCAGAAGATGTTGAGGAGGACTTGCAGAACCTAAGCCTTACAAATAAGC
CAATAAAATCGAAACAGCAAAGGGTCACAGAGAAAGAGGAGGACGAATCA
TACTTGACTGCCAACGACGATCCCGAGGATTGTGACGAGGAACAACAGCT
GCGCCTTCTCGGATTGCCAACATCATTTGCGTCGAAGGCAGATATAATTA
ATTATAGAAAGGAAAGAAAGACACAGTACGAACTATCTAGCAGCGATAGC
GAGGACGATCATGATCTGTTGACCATGGAGAACAACGAAAACGAGGCTCT
GCACGGCGTTCAGAGCGGTTCTGTTAAAAAGAAAAAACGACGGCAAAGGC
AAATAAAAAAACTCAAGGCCAGGATGCCAGAGTGCATGCAAGAGGATAAC
AACAAAATGGTCAAGTACTGGGTCAAGCGATTCTCGCTGTTCTCCCGCTT
CGATCAGGGCATTCGGCTGGACCGCGAGAGCTGGTTCTCGGTGACACCCG
AGAAGATTGCCAAACAAACGGCCCGACGACTGGCCTGCGACGTGATCGTA
GATGCTTTCTGTGGATGCGGCGGCAATGCCATTCAGTTTGCAAACACCTG
TGGACGCGTAATTGCTGTGGACATCGATGCCGAGAAGTTGGCCATGGCCA
AGCATAATGCCGGCATTTATGGTGTGGCCCATAAGATCGAGTTTATCCAC
GCCGATTTTCTGCAGTTTGCGGCCAGCACAAAGCTGCGCCCAAATGTGGT
TTTCCTGAGCCCTCCGTGGGGTGGTCCTGACTACCAAAAGCAGGCCACCT
TTGATATCGAAACAGGTCTCCTGCCCGTGGGTGCTAGCCAACTGATGCAG
CTGTCCCGTAGCCTGGCATCTGACGTAGCTTTCTTTCTGCCACGCAACGC
CAATATGAAGCAGGTGGTCGCTCTAAGTGGAGTTGGGCAGCAGTGCGAGG
TGGAGCACAACTATCTGGACACCCGAATGGTTGCGCTCACTGCTTATTAT
GGTAAAGGAATCATAAAGGGTTCAGTGGGAGAAGATGAGTAGAAGCTTTC
TAGACCAT
BS04451.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:38:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 1401 | CG44890-PB | 1..1401 | 92..1492 | 7005 | 100 | Plus |
| moi-RA | 537 | CG42350-PA | 459..537 | 17..95 | 395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:38:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 2089 | CG44890-RB | 545..2020 | 17..1492 | 7380 | 100 | Plus |
| moi-RA | 2089 | CG42350-RA | 545..2020 | 17..1492 | 7380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:38:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18256133..18257608 | 17..1492 | 7380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:38:51 has no hits.
BS04451.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:16:20 Download gff for
BS04451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42350-RA | 518..2006 | 9..1498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:12:30 Download gff for
BS04451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgs1-RB | 545..2020 | 17..1492 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:32:11 Download gff for
BS04451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42350-RA | 518..2006 | 9..1498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:23:55 Download gff for
BS04451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| moi-RA | 545..2020 | 17..1492 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:23:55 Download gff for
BS04451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18256133..18257608 | 17..1492 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:12:30 Download gff for
BS04451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14081855..14083330 | 17..1492 | 100 | | Plus |
BS04451.pep Sequence
Translation from 16 to 1491
> BS04451.pep
MVHPGHRQSRGLADSQAGDEKSDREMNTHHLTTSRTNPQFYIFSQLFGND
FDWNNCNWGGIQNVTWKEFWQREGHELLEQKWHKRFPEYKDLIEVVSSEE
QGLWQELWEKHASDYSEKFWYIFSCAFENYQHDLAKSFGLDVAENSEDVE
EDLQNLSLTNKPIKSKQQRVTEKEEDESYLTANDDPEDCDEEQQLRLLGL
PTSFASKADIINYRKERKTQYELSSSDSEDDHDLLTMENNENEALHGVQS
GSVKKKKRRQRQIKKLKARMPECMQEDNNKMVKYWVKRFSLFSRFDQGIR
LDRESWFSVTPEKIAKQTARRLACDVIVDAFCGCGGNAIQFANTCGRVIA
VDIDAEKLAMAKHNAGIYGVAHKIEFIHADFLQFAASTKLRPNVVFLSPP
WGGPDYQKQATFDIETGLLPVGASQLMQLSRSLASDVAFFLPRNANMKQV
VALSGVGQQCEVEHNYLDTRMVALTAYYGKGIIKGSVGEDE*
BS04451.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:40:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-PB | 466 | CG44890-PB | 1..466 | 26..491 | 2480 | 100 | Plus |
