Clone BS04463 Report

Search the DGRC for BS04463

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:44
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG4318-RB
Protein status:BS04463.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS04463.3prime Sequence

741 bp (740 high quality bases) assembled on 2005-12-01

> BS04463.3prime
ATGGTCTAGAAAGCTTTTAATTATGGTGCATGGTCTCGTGGTTCTTAAGG
GCAGAGTTTCTGTTGAAGATCTTGGGGCATCGGGAACACTTGTAGGATCG
TAATTCAGGTCTCGAACTATGTACGCGCTCATGGCGCCTAAGACCGCGGA
TTTGTGCGTAGGACTGGGAGCATTGTAAGCATTTGTAAGGTTTTTCACGC
GCATGGACCCACATGTGACACTTAAGGTGCGCAGGTAACATGAAATACTT
CCCGCAAATGTTACATTTATGTGTCTTCTTCAGCATTTTCTTCTTGGTAT
CCTTCTGGGCGCTGCTCTGGCTCACATTGCCATTCCCGTTGGAGTTTGAG
TTGGGGCACATATTCTCCACGTTGTCCCCCGGTGAATCGATTGTCAAGTC
AATTGTCTCCATCTCCTGGCTGCCATCGACTGGCTCAATCAGTTCAACAT
CGGAGTCATTCGATCCTTCTTCCTCATAATTCATCTCACTGACCACCATC
TCATCCTGCTCAATCACCTGCACGCTGTCCATCCCGTAAGCAGTCTGCGC
ATCCAGCGCACAAGACTGGCAAATGGTCTTGGGAAAAGGATCCTTCGGTA
GAACCGGGAAGCCGCACCAATCGGAAATCATGGTCGCTAGGGAAACGCCG
GGTAGCGGCATCGTTTCGAAGATGCATAGCATGTTCTCCATCTCCCTCAA
ACAGACACGGCACATCCTGGAATCCATGTCGACTGATAACT

BS04463.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-PA 699 CG4318-RA 1..699 715..17 3495 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 14:42:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-RB 1464 CG4318-RB 65..775 727..17 3555 100 Minus
CG4318-RB 1464 CG4318-RB 778..861 100..17 390 97.6 Minus
CG4318-RB 1464 CG4318-RB 864..947 100..17 390 97.6 Minus
CG4318-RB 1464 CG4318-RB 950..1033 100..17 390 97.6 Minus
CG4318-RB 1464 CG4318-RB 1036..1119 100..17 390 97.6 Minus
CG4318-RB 1464 CG4318-RB 1122..1205 100..17 390 97.6 Minus
CG4318-RB 1464 CG4318-RB 1208..1293 100..17 360 95.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 14:42:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13154150..13154860 17..727 3555 100 Plus
X 23542271 X 13153720..13153803 17..100 390 97.6 Plus
X 23542271 X 13153806..13153889 17..100 390 97.6 Plus
X 23542271 X 13153892..13153975 17..100 390 97.6 Plus
X 23542271 X 13153978..13154061 17..100 390 97.6 Plus
X 23542271 X 13154064..13154147 17..100 390 97.6 Plus
X 23542271 X 13153643..13153717 26..100 345 97.3 Plus
Blast to na_te.dros performed on 2015-01-31 14:42:07 has no hits.

BS04463.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:49:04 Download gff for BS04463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-PA 1..699 17..715 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:10:46 Download gff for BS04463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-PA 1..699 17..715 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:20:21 Download gff for BS04463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 57..782 9..738 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:37:52 Download gff for BS04463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 57..782 9..738 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:37:52 Download gff for BS04463.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13154143..13154868 9..738 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:20:21 Download gff for BS04463.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13048176..13048901 9..738 98   Plus

BS04463.5prime Sequence

741 bp (740 high quality bases) assembled on 2005-12-01

> BS04463.5prime
GAAGTTATCAGTCGACATGGATTCCAGGATGTGCCGTGTCTGTTTGAGGG
AGATGGAGAACATGCTATGCATCTTCGAAACGATGCCGCTACCCGGCGTT
TCCCTAGCGACCATGATTTCCGATTGGTGCGGCTTCCCGGTTCTACCGAA
GGATCCTTTTCCCAAGACCATTTGCCAGTCTTGTGCGCTGGATGCGCAGA
CTGCTTACGGGATGGACAGCGTGCAGGTGATTGAGCAGGATGAGATGGTG
GTCAGTGAGATGAATTATGAGGAAGAAGGATCGAATGACTCCGATGTTGA
ACTGATTGAGCCAGTCGATGGCAGCCAGGAGATGGAGACAATTGACTTGA
CAATCGATTCACCGGGGGACAACGTGGAGAATATGTGCCCCAACTCAAAC
TCCAACGGGAATGGCAATGTGAGCCAGAGCAGCGCCCAGAAGGATACCAA
GAAGAAAATGCTGAAGAAGACACATAAATGTAACATTTGCGGGAAGTATT
TCATGTTACCTGCGCACCTTAAGTGTCACATGTGGGTCCATGCGCGTGAA
AAACCTTACAAATGCTTACAATGCTCCCAGTCCTACGCACAAATCCGCGG
TCTTAGGCGCCATGAGCGCGTACATAGTTCGAGACCTGAATTACGATCCT
ACAAGTGTTCCCGATGCCCCAAGATCTTCAACAGAAACTCTGCCCTTAAG
AACCACGAGACCATGCACCATAATTAAAAGCTTTCTAGACC

BS04463.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-PA 699 CG4318-RA 1..699 29..727 3495 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:21:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-RB 1464 CG4318-RB 65..775 17..727 3555 100 Plus
CG4318-RB 1464 CG4318-RB 778..861 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 864..947 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 950..1033 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 1036..1119 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 1122..1205 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 1208..1293 644..727 360 95.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13154150..13154860 727..17 3555 100 Minus
X 23542271 X 13153720..13153803 727..644 390 97.6 Minus
X 23542271 X 13153806..13153889 727..644 390 97.6 Minus
X 23542271 X 13153892..13153975 727..644 390 97.6 Minus
X 23542271 X 13153978..13154061 727..644 390 97.6 Minus
X 23542271 X 13154064..13154147 727..644 390 97.6 Minus
X 23542271 X 13153643..13153717 718..644 345 97.3 Minus
Blast to na_te.dros performed on 2015-02-12 05:21:21 has no hits.

BS04463.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:49:05 Download gff for BS04463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-PA 1..699 29..727 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:10:47 Download gff for BS04463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-PA 1..699 29..727 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:31:31 Download gff for BS04463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 57..782 6..735 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:34:29 Download gff for BS04463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 57..782 6..735 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:34:29 Download gff for BS04463.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13154143..13154868 6..735 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:31:31 Download gff for BS04463.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13048176..13048901 6..735 98   Minus

BS04463.complete Sequence

743 bp (743 high quality bases) assembled on 2005-09-13

GenBank Submission: FJ634948

> BS04463.complete
GAAGTTATCAGTCGACATGGATTCCAGGATGTGCCGTGTCTGTTTGAGGG
AGATGGAGAACATGCTATGCATCTTCGAAACGATGCCGCTACCCGGCGTT
TCCCTAGCGACCATGATTTCCGATTGGTGCGGCTTCCCGGTTCTACCGAA
GGATCCTTTTCCCAAGACCATTTGCCAGTCTTGTGCGCTGGATGCGCAGA
CTGCTTACGGGATGGACAGCGTGCAGGTGATTGAGCAGGATGAGATGGTG
GTCAGTGAGATGAATTATGAGGAAGAAGGATCGAATGACTCCGATGTTGA
ACTGATTGAGCCAGTCGATGGCAGCCAGGAGATGGAGACAATTGACTTGA
CAATCGATTCACCGGGGGACAACGTGGAGAATATGTGCCCCAACTCAAAC
TCCAACGGGAATGGCAATGTGAGCCAGAGCAGCGCCCAGAAGGATACCAA
GAAGAAAATGCTGAAGAAGACACATAAATGTAACATTTGCGGGAAGTATT
TCATGTTACCTGCGCACCTTAAGTGTCACATGTGGGTCCATGCGCGTGAA
AAACCTTACAAATGCTTACAATGCTCCCAGTCCTACGCACAAATCCGCGG
TCTTAGGCGCCATGAGCGCGTACATAGTTCGAGACCTGAATTACGATCCT
ACAAGTGTTCCCGATGCCCCAAGATCTTCAACAGAAACTCTGCCCTTAAG
AACCACGAGACCATGCACCATAATTAAAAGCTTTCTAGACCAT

BS04463.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-RB 711 CG4318-PB 1..711 17..727 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-RB 1464 CG4318-RB 65..775 17..727 3555 100 Plus
CG4318-RB 1464 CG4318-RB 778..861 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 864..947 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 950..1033 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 1036..1119 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 1122..1205 644..727 390 97.6 Plus
CG4318-RB 1464 CG4318-RB 1208..1282 644..718 345 97.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13154150..13154860 727..17 3555 100 Minus
X 23542271 X 13153720..13153803 727..644 390 97.6 Minus
X 23542271 X 13153806..13153889 727..644 390 97.6 Minus
X 23542271 X 13153892..13153975 727..644 390 97.6 Minus
X 23542271 X 13153978..13154061 727..644 390 97.6 Minus
X 23542271 X 13154064..13154147 727..644 390 97.6 Minus
X 23542271 X 13153643..13153717 718..644 345 97.3 Minus
Blast to na_te.dros performed on 2014-11-28 00:57:29 has no hits.

BS04463.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:32:01 Download gff for BS04463.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RA 1..699 29..727 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:16:09 Download gff for BS04463.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RA 57..782 6..735 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:35:07 Download gff for BS04463.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 65..773 17..725 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:32:01 Download gff for BS04463.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RA 1..699 29..727 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:41:10 Download gff for BS04463.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 65..773 17..725 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:41:10 Download gff for BS04463.complete
Subject Subject Range Query Range Percent Splice Strand
X 13154152..13154860 17..725 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:35:07 Download gff for BS04463.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13048185..13048893 17..725 100   Minus

BS04463.pep Sequence

Translation from 16 to 726

> BS04463.pep
MDSRMCRVCLREMENMLCIFETMPLPGVSLATMISDWCGFPVLPKDPFPK
TICQSCALDAQTAYGMDSVQVIEQDEMVVSEMNYEEEGSNDSDVELIEPV
DGSQEMETIDLTIDSPGDNVENMCPNSNSNGNGNVSQSSAQKDTKKKMLK
KTHKCNICGKYFMLPAHLKCHMWVHAREKPYKCLQCSQSYAQIRGLRRHE
RVHSSRPELRSYKCSRCPKIFNRNSALKNHETMHHN*

BS04463.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:51:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-PB 236 CG4318-PB 1..236 1..236 1287 100 Plus
CG15436-PA 346 CG15436-PA 2..232 3..234 248 30 Plus
Neu2-PB 308 CG7204-PB 1..197 16..234 246 30.8 Plus
Neu2-PA 382 CG7204-PA 1..197 16..234 246 30.8 Plus
CG6808-PB 375 CG6808-PB 162..333 72..234 199 28.6 Plus
CG15436-PA 346 CG15436-PA 220..317 135..235 173 32.7 Plus