Clone Sequence Records
BS04523.3prime Sequence
336 bp (335 high quality bases) assembled on 2005-12-01
> BS04523.3prime
ATGGTCTAGAAAGCTTTTAGGATTCGTCCTCTGGCTCATCGGGTTCCTCC
TCAATTTCCGTGAGAATGGTGCGTATCTTCATAAGCAGCTCCTTTTTGAC
GGCATCCGGGACCAGGGTGCGTGCCTTGGGTGTTACCTCGGCGATCAGCT
GCTCTACGGTGAAGCTGTTGTTGGTGCCCTTCTCCATCAGGATGTTGCGG
CACATCAGACGCACCTCGTCCCGCCAGCCACATTCCGTAAGGCGGCTGCA
GAGCAAATCCTTGATCTTGGAACGGTCGCCGGTTAGCACCGTGTACTGAT
CAACTGCGCCGGAAGTGCTCATGTCGACTGATAACT
BS04523.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:49:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15191-PA | 306 | e(y)2-RA | 1..306 | 322..17 | 1530 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 10:33:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-RA | 503 | CG15191-RA | 143..448 | 322..17 | 1530 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 10:33:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11576173..11576478 | 17..322 | 1530 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 10:33:08 has no hits.
BS04523.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:50:52 Download gff for
BS04523.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-PA | 1..306 | 17..322 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:13:03 Download gff for
BS04523.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15191-PA | 1..306 | 17..322 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 11:26:38 Download gff for
BS04523.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 140..452 | 10..329 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 12:37:55 Download gff for
BS04523.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 140..452 | 10..329 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 12:37:55 Download gff for
BS04523.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11576169..11576481 | 10..329 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 11:26:38 Download gff for
BS04523.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11470202..11470514 | 10..329 | 97 | | Plus |
BS04523.5prime Sequence
336 bp (335 high quality bases) assembled on 2005-12-01
> BS04523.5prime
GAAGTTATCAGTCGACATGAGCACTTCCGGCGCAGTTGATCAGTACACGG
TGCTAACCGGCGACCGTTCCAAGATCAAGGATTTGCTCTGCAGCCGCCTT
ACGGAATGTGGCTGGCGGGACGAGGTGCGTCTGATGTGCCGCAACATCCT
GATGGAGAAGGGCACCAACAACAGCTTCACCGTAGAGCAGCTGATCGCCG
AGGTAACACCCAAGGCACGCACCCTGGTCCCGGATGCCGTCAAAAAGGAG
CTGCTTATGAAGATACGCACCATTCTCACGGAAATTGAGGAGGAACCCGA
TGAGCCAGAGGACGAATCCTAAAAGCTTTCTAGACC
BS04523.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:49:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15191-PA | 306 | e(y)2-RA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:04:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-RA | 503 | CG15191-RA | 143..448 | 17..322 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:04:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11576173..11576478 | 322..17 | 1530 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 09:04:02 has no hits.
BS04523.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:50:53 Download gff for
BS04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-PA | 1..306 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:13:04 Download gff for
BS04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15191-PA | 1..306 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:26:54 Download gff for
BS04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 140..452 | 10..329 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:31:55 Download gff for
BS04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 140..452 | 10..329 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 12:31:55 Download gff for
BS04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11576169..11576481 | 10..329 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:26:54 Download gff for
BS04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11470202..11470514 | 10..329 | 97 | | Minus |
BS04523.complete Sequence
338 bp (338 high quality bases) assembled on 2005-09-13
GenBank Submission: FJ634964
> BS04523.complete
GAAGTTATCAGTCGACATGAGCACTTCCGGCGCAGTTGATCAGTACACGG
TGCTAACCGGCGACCGTTCCAAGATCAAGGATTTGCTCTGCAGCCGCCTT
ACGGAATGTGGCTGGCGGGACGAGGTGCGTCTGATGTGCCGCAACATCCT
GATGGAGAAGGGCACCAACAACAGCTTCACCGTAGAGCAGCTGATCGCCG
AGGTAACACCCAAGGCACGCACCCTGGTCCCGGATGCCGTCAAAAAGGAG
CTGCTTATGAAGATACGCACCATTCTCACGGAAATTGAGGAGGAACCCGA
TGAGCCAGAGGACGAATCCTAAAAGCTTTCTAGACCAT
BS04523.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:05:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-RA | 306 | CG15191-PA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:05:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-RA | 503 | CG15191-RA | 143..448 | 17..322 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:05:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11576173..11576478 | 322..17 | 1530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 02:05:19 has no hits.
BS04523.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:50:07 Download gff for
BS04523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 1..306 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:59:01 Download gff for
BS04523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 115..427 | 10..329 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:09:02 Download gff for
BS04523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 143..446 | 17..320 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:50:07 Download gff for
BS04523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 115..427 | 10..329 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:37:09 Download gff for
BS04523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 143..446 | 17..320 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:37:09 Download gff for
BS04523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11576175..11576478 | 17..320 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:09:02 Download gff for
BS04523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11470208..11470511 | 17..320 | 100 | | Minus |
BS04523.pep Sequence
Translation from 16 to 321
> BS04523.pep
MSTSGAVDQYTVLTGDRSKIKDLLCSRLTECGWRDEVRLMCRNILMEKGT
NNSFTVEQLIAEVTPKARTLVPDAVKKELLMKIRTILTEIEEEPDEPEDE
S*
BS04523.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:46:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-PA | 101 | CG15191-PA | 1..101 | 1..101 | 514 | 100 | Plus |
e(y)2b-PB | 95 | CG14612-PB | 18..93 | 11..87 | 181 | 41.6 | Plus |
e(y)2b-PA | 95 | CG14612-PA | 18..93 | 11..87 | 181 | 41.6 | Plus |