Clone BS04605 Report

Search the DGRC for BS04605

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:46
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptCG1847-RA
Protein status:BS04605.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS04605.3prime Sequence

979 bp (855 high quality bases) assembled on 2005-12-02

> BS04605.3prime
ATGGTCTAGAAAGCTTCTAGAAGAGCTTCTGCATGTGAATGCGATCCTGG
ACGTTACGTGCCTGCTGCTGATCCTCGATGGACTTGAGCTCCTTAGACAC
GGTCGACTTGAGGCTGGCGTCCAAGGCCAAGGCGTCGAGGAAGTCGCGAC
GTGCCTGTGCTGGATTCCAGGCACCCGCATGGGCCTTGGCCCGACGAAAA
AGTGCCTTGACATTGCGCGGATCCAGGGTGAGCACCTCGTTGCAGTGCTC
GATCACAGCGTAGAAGTCGCCGGCGATCAACCGACATTGCGCGTAGTTCA
ACAACAGCGGTGTCTTGATGGCCGCCAGCTCCTGCCACTCCTCGTCGTGC
GGCTTCTCCTTTAGCATCAGCTGCTCCACAATTCCGACAGCCTCGCGGTA
GCAGGTCTCCGCCTCTGTGAACCGACTGGCCTTATAGAAGTTGTTGCCCC
GTTCGCGCAGCGTACTGGTGGCCAGCATCTTTTCGTCGTCGGACATCTGC
CAGCGCTCTTTTTCGTACTGCTCGGGCAGCTCAATGGAGAACAGTTCAAT
GATGAACTCCAGATCGGAAGGATTTTGCAGCAGCTCATCCAGGTCGGTGT
ACCCAATGCCCTCGTTCTGCAATGTCATTCCGCAGCAGTGACGTCGCTCC
TCCGGTTTCTTGCCAATGTCCCGCAGGGTCTTGGATATAAAAGGATATTG
AGCGCAGAGCGACTTATGTACCGTGAACTTGGCCACTTCGTTAAGGGACA
TCTGCTGCACAATCAGCTCCCAGACCTCTAGCTTAAACTTCTTCCCCAGG
ACCAGCTCCATGGGCTTCTCCATCTTGCGGCTATCATCGATGATGCGACT
GTCGCCGGCCCTCCGCGTTTGAAAGTGGAACTTCACCCTGGTGCCCGGGG
TTAGCTCGATGTAGGCGTTTCCCGAATTGAGGATCTCCTTTCGTATGGGC
TTCATATCGGACTTGCTGCGCGACTGCAT

BS04605.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-PA 963 CG1847-RA 1..963 979..17 4790 99.8 Minus
CG1847-PB 996 CG1847-RB 126..996 887..17 4355 100 Minus
CG1847-PB 996 CG1847-RB 1..93 979..887 440 98.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-RC 1776 CG1847-RC 78..1042 979..15 4810 99.9 Minus
CG1847-RA 1776 CG1847-RA 78..1042 979..15 4810 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 13:22:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11869739..11870434 710..15 3480 100 Minus
X 23542271 X 11869481..11869658 887..710 890 100 Minus
X 23542271 X 11869247..11869343 979..883 470 99 Minus
Blast to na_te.dros performed on 2015-02-06 13:22:28 has no hits.

BS04605.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:52:59 Download gff for BS04605.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-PA 1..963 17..979 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:15:53 Download gff for BS04605.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-PA 1..963 17..979 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:52:06 Download gff for BS04605.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 78..1042 15..979 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:59:07 Download gff for BS04605.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 78..1042 15..979 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:59:07 Download gff for BS04605.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11869247..11869339 887..979 98 -> Minus
X 11869482..11869658 710..886 100 -> Minus
X 11869740..11870434 15..709 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:52:06 Download gff for BS04605.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11763280..11763372 887..979 98 -> Minus
arm_X 11763515..11763691 710..886 100 -> Minus
arm_X 11763773..11764467 15..709 100   Minus

BS04605.5prime Sequence

883 bp (865 high quality bases) assembled on 2005-11-29

> BS04605.5prime
GAAGTTATCAGTCGACATGCAGTCGCGCAGCAAGTCCGATATGAAGCCCA
TACGAAAGGAGATCCTCAATCCGGGAAACGCCTACATCGAGCTAACCCCG
GGCACCAGGGTGAAGTTCCACTTTCAAACGCGGAGGGCCGGCGACAGTCG
CATCATCGATGATAGCCGCAAGATGGAGAAGCCCATGGAGCTGGTCCTGG
GGAAGAAGTTTAAGCTAGAGGTCTGGGAGCTGATTGTGCAGCAGATGTCC
CTTAACGAAGTGGCCAAGTTCACGGTACATAAGTCGCTCTGCGCTCAATA
TCCTTTTATATCCAAGACCCTGCGGGACATTGGCAAGAAACCGGAGGAGC
GACGTCACTGCTGCGGAATGACATTGCAGAACGAGGGCATTGGGTACACC
GACCTGGATGAGCTGCTGCAAAATCCTTCCGATCTGGAGTTCATCATTGA
ACTGTTCTCCATTGAGCTGCCCGAGCAGTACGAAAAAGAGCGCTGGCAGA
TGTCCGACGACGAAAAGATGCTGGCCACCAGTACGCTGCGCGAACGGGGC
AACAACTTCTATAAGGCCAGTCGGTTCACAGAGGCGGAGACCTGCTACCG
CGAGGCTGTCGGAATTGTGGAGCAGCTGATGCTAAAGGAGAAGCCGCACG
ACGAGGAGTGGCAGGAGCTGGCGGCCATCAAGACACCGCTGTTGTTGAAC
TACGCGCAATGTCGGTTGATCGCCGGCGACTTCTACGCTGTGATCGAGCA
CTGCAACGAGGTGCTCACCCTGGATCCGCGCAATGTCAAGGCACTTTTTC
GTCGGGCCAAGGCCCATGCGGGTGCCTGGAATCCAGCACAGGCACGTCGC
GACTTCCTCGACGCCTTGGCCTTGGACGCCAGC

BS04605.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-PA 963 CG1847-RA 1..867 17..883 4335 100 Plus
CG1847-PB 996 CG1847-RB 126..900 109..883 3875 100 Plus
CG1847-PB 996 CG1847-RB 1..93 17..109 465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-RC 1776 CG1847-RC 78..944 17..883 4335 100 Plus
CG1847-RA 1776 CG1847-RA 78..944 17..883 4335 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11869739..11870336 286..883 2990 100 Plus
X 23542271 X 11869481..11869658 109..286 890 100 Plus
X 23542271 X 11869247..11869343 17..113 485 100 Plus
Blast to na_te.dros performed on 2015-02-12 06:33:03 has no hits.

BS04605.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:00 Download gff for BS04605.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-PA 1..867 17..883 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:15:55 Download gff for BS04605.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-PA 1..867 17..883 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:37:42 Download gff for BS04605.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 67..944 5..883 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:16:45 Download gff for BS04605.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 67..944 5..883 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:16:45 Download gff for BS04605.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11869236..11869339 5..109 95 -> Plus
X 11869482..11869658 110..286 100 -> Plus
X 11869740..11870336 287..883 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:37:42 Download gff for BS04605.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11763269..11763372 5..109 95 -> Plus
arm_X 11763515..11763691 110..286 100 -> Plus
arm_X 11763773..11764369 287..883 100   Plus

BS04605.complete Sequence

995 bp (995 high quality bases) assembled on 2006-02-02

GenBank Submission: FJ634973

> BS04605.complete
GAAGTTATCAGTCGACATGCAGTCGCGCAGCAAGTCCGATATGAAGCCCA
TACGAAAGGAGATCCTCAATCCGGGAAACGCCTACATCGAGCTAACCCCG
GGCACCAGGGTGAAGTTCCACTTTCAAACGCGGAGGGCCGGCGACAGTCG
CATCATCGATGATAGCCGCAAGATGGAGAAGCCCATGGAGCTGGTCCTGG
GGAAGAAGTTTAAGCTAGAGGTCTGGGAGCTGATTGTGCAGCAGATGTCC
CTTAACGAAGTGGCCAAGTTCACGGTACATAAGTCGCTCTGCGCTCAATA
TCCTTTTATATCCAAGACCCTGCGGGACATTGGCAAGAAACCGGAGGAGC
GACGTCACTGCTGCGGAATGACATTGCAGAACGAGGGCATTGGGTACACC
GACCTGGATGAGCTGCTGCAAAATCCTTCCGATCTGGAGTTCATCATTGA
ACTGTTCTCCATTGAGCTGCCCGAGCAGTACGAAAAAGAGCGCTGGCAGA
TGTCCGACGACGAAAAGATGCTGGCCACCAGTACGCTGCGCGAACGGGGC
AACAACTTCTATAAGGCCAGTCGGTTCACAGAGGCGGAGACCTGCTACCG
CGAGGCTGTCGGAATTGTGGAGCAGCTGATGCTAAAGGAGAAGCCGCACG
ACGAGGAGTGGCAGGAGCTGGCGGCCATCAAGACACCGCTGTTGTTGAAC
TACGCGCAATGTCGGTTGATCGCCGGCGACTTCTACGCTGTGATCGAGCA
CTGCAACGAGGTGCTCACCCTGGATCCGCGCAATGTCAAGGCACTTTTTC
GTCGGGCCAAGGCCCATGCGGGTGCCTGGAATCCAGCACAGGCACGTCGC
GACTTCCTCGACGCCTTGGCCTTGGACGCCAGCCTCAAGTCGACCGTGTC
TAAGGAGCTCAAGTCCATCGAGGATCAGCAGCAGGCACGTAACGTCCAGG
ATCGCATTCACATGCAGAAGCTCTTCTAGAAGCTTTCTAGACCAT

BS04605.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-RC 1029 CG1847-PC 1..965 17..981 4825 100 Plus
CG1847-RA 963 CG1847-PA 1..963 17..979 4815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-RC 1776 CG1847-RC 78..1042 17..981 4825 100 Plus
CG1847-RA 1776 CG1847-RA 78..1042 17..981 4825 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11869739..11870434 286..981 3480 100 Plus
X 23542271 X 11869481..11869658 109..286 890 100 Plus
X 23542271 X 11869247..11869343 17..113 485 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:42:46 has no hits.

BS04605.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:57:04 Download gff for BS04605.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 1..963 17..979 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:55:49 Download gff for BS04605.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 49..1024 5..981 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:27 Download gff for BS04605.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 78..1040 17..979 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:57:06 Download gff for BS04605.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 49..1024 5..981 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:10 Download gff for BS04605.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 78..1040 17..979 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:51:10 Download gff for BS04605.complete
Subject Subject Range Query Range Percent Splice Strand
X 11869247..11869339 17..109 100 -> Plus
X 11869482..11869658 110..286 100 -> Plus
X 11869740..11870432 287..979 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:27 Download gff for BS04605.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11763280..11763372 17..109 100 -> Plus
arm_X 11763515..11763691 110..286 100 -> Plus
arm_X 11763773..11764465 287..979 100   Plus

BS04605.pep Sequence

Translation from 16 to 978

> BS04605.pep
MQSRSKSDMKPIRKEILNPGNAYIELTPGTRVKFHFQTRRAGDSRIIDDS
RKMEKPMELVLGKKFKLEVWELIVQQMSLNEVAKFTVHKSLCAQYPFISK
TLRDIGKKPEERRHCCGMTLQNEGIGYTDLDELLQNPSDLEFIIELFSIE
LPEQYEKERWQMSDDEKMLATSTLRERGNNFYKASRFTEAETCYREAVGI
VEQLMLKEKPHDEEWQELAAIKTPLLLNYAQCRLIAGDFYAVIEHCNEVL
TLDPRNVKALFRRAKAHAGAWNPAQARRDFLDALALDASLKSTVSKELKS
IEDQQQARNVQDRIHMQKLF*

BS04605.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-PA 320 CG1847-PA 1..320 1..320 1658 100 Plus
CG1847-PC 342 CG1847-PC 1..320 1..320 1658 100 Plus
FKBP59-PB 439 CG4535-PB 239..389 158..315 174 25.9 Plus
FKBP59-PA 439 CG4535-PA 239..389 158..315 174 25.9 Plus
CG8336-PD 383 CG8336-PD 148..382 98..320 153 25.1 Plus