Clone Sequence Records
BS04613.3prime Sequence
861 bp (860 high quality bases) assembled on 2005-12-02
> BS04613.3prime
ATGGTCTAGAAAGCTTTTAAACTTCTTTGTCGGTTTGACAAATAACATGC
TTCTTTCTGTGGCACGGATCATCGTTCATTTTGCTCCTAATCAGCTCCAC
ACAGTTCTCATCTTCATTGCCGTGATTGGGTTCGCCCGCATTCCAATTGA
GGAATTCAACTTCCCTGCCGGATGCCACGGATACGTAGGTGTTACTGCTT
TGCAAGTCGTTTATGCCCAGCCAGTAGCTCTTGTCGTCCAGTCTCGCTGA
AATGGCGTCCAGCTCCTCTTGATCCTTGATGGCGGCTATATAGCCACCCA
TGTCACGACAGAAGTCTACAGCGGATTGCCAGTCGTAGGCATCCTTGTGA
TTTATGTAGAAGAGTCTAGAGCCGATTCGCTCAAATTTCGGCCAGAAGAC
CTTGGTATAAATTTCCTTGAGTGTGACTTGGTTGGCGGACTGCTGAGCTC
CCAGCTTGGTCAGCTCATCCTTCTGATTCTGCTCCAACTTTTGCAATTTC
CGTTCAAAATCCTCTGGGATCTTCTTTAGAGTTTCCTGAAGTAACTTCTG
CTGTTCTTCAATCTGAGCCAGCCGCATTTCGAAATTTATCGGCATGGCGT
TCTTTAGGGCTTCCAACTGATCCTGCTGAGATTCCTTGGTGAGATTGATT
TGATTTTCCAACTGGTCGCCCAATGTCTTTTGCTGATTTTCCATTTTCAT
TAGCCTCGCATCGAGTTCAGCTGGCATTTTCTTTAGAGACTCCTGCAGTG
TCGTCTGAAGATGTTCCATTCGGTCCAGTCTATCCTTGATGTCTCCTGGA
ACCTTCTGCGCTGATTCCTCCAAGGATAGCGCTTGTGCCGCCAGCTGGGT
CTGTATCCTGT
BS04613.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2958-PA | 1080 | lectin-24Db-RA | 236..1080 | 861..17 | 4225 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 15:43:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24Db-RA | 1162 | CG2958-RA | 261..1106 | 861..16 | 4230 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 15:43:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4188383..4189228 | 861..16 | 4230 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 15:43:54 has no hits.
BS04613.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:04 Download gff for
BS04613.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2958-PA | 236..1080 | 17..861 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:15:59 Download gff for
BS04613.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2958-PA | 236..1080 | 17..861 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:16:48 Download gff for
BS04613.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 261..1106 | 16..861 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:44:54 Download gff for
BS04613.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 261..1106 | 16..861 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:44:54 Download gff for
BS04613.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4188383..4189228 | 16..861 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:16:48 Download gff for
BS04613.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4188383..4189228 | 16..861 | 100 | | Minus |
BS04613.5prime Sequence
876 bp (810 high quality bases) assembled on 2005-12-02
> BS04613.5prime
GAAGTTATCAGTCGACATGTTTAGGCTTGAAAAATGTATTGTGTACTTAC
TTGTTGCCTGCAATCTGGTTGAATCACGAGCGGAATCCACAGAAAATTCC
CGATCCGTGTGCCTTCTGAAAGATCCGCCAAATCAGTGCGGAGAATTCTG
CCTTTCGGTGCTCCAACCGCTATTGGATCACATTGTAAAGCACCAGGAGC
AATGGAACACCTCCGAGGCCCTCTGGCTGAACGAAACCCAGGGCAAATTG
GACAGGATACAGACCCAGCTGGCGGCACAAGCGCTATCCTTGGAGGAATC
AGCGCAGAAGGTTCCAGGAGACATCAAGGATAGACTGGACCGAATGGAAC
ATCTTCAGACGACACTGCAGGAGTCTCTAAAGAAAATGCCAGCTGAACTC
GATGCGAGGCTAATGAAAATGGAAAATCAGCAAAAGACATTGGGCGACCA
GTTGGAAAATCAAATCAATCTCACCAAGGAATCTCAGCAGGATCAGTTGG
AAGCCCTAAAGAACGCCATGCCGATAAATTTCGAAATGCGGCTGGCTCAG
ATTGAAGAACAGCAGAAGTTACTTCAGGAAACTCTAAAGAAGATCCCAGA
GGATTTTGAACGGAAATTGCAAAAGTTGGAGCAGAATCAGAAGGATGAGC
TGACCAAGCTGGGAGCTCAGCAGTCCGCCAACCAAGTCACACTCAAGGAA
ATTTATACCAAGGTCTTCTGGCCGAAATTTGAGCGAATCGGCTCTAGACT
CTTCTACATAAATCACAAGGATGCCTACGACTGGCAATCCGCTGTAGACT
TCTGTCGTGACATGGGTGGCTATATAGCCGCCATCAAGGATCAAGAGGAG
CTGGACGCCATTTCAGCGAGACTGGA
BS04613.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2958-PA | 1080 | lectin-24Db-RA | 1..860 | 17..876 | 4300 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:14:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24Db-RA | 1162 | CG2958-RA | 26..885 | 17..876 | 4300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 12:14:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4188148..4189007 | 17..876 | 4300 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 12:14:37 has no hits.
BS04613.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:05 Download gff for
BS04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2958-PA | 1..859 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:00 Download gff for
BS04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2958-PA | 1..859 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:47:06 Download gff for
BS04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 18..884 | 7..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:53:51 Download gff for
BS04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 18..884 | 7..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:53:51 Download gff for
BS04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4188140..4189006 | 7..875 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:47:06 Download gff for
BS04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4188140..4189006 | 7..875 | 99 | | Plus |
BS04613.complete Sequence
1112 bp (1112 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634975
> BS04613.complete
GAAGTTATCAGTCGACATGTTTAGGCTTGAAAAATGTATTGTGTACTTAC
TTGTTGCCTGCAATCTGGTTGAATCACGAGCGGAATCCACAGAAAATTCC
CGATCCGTGTGCCTTCTGAAAGATCCGCCAAATCAGTGCGGAGAATTCTG
CCTTTCGGTGCTCCAACCGCTATTGGATCACATTGTAAAGCACCAGGAGC
AATGGAACACCTCCGAGGCCCTCTGGCTGAACGAAACCCAGGGCAAATTG
GACAGGATACAGACCCAGCTGGCGGCACAAGCGCTATCCTTGGAGGAATC
AGCGCAGAAGGTTCCAGGAGACATCAAGGATAGACTGGACCGAATGGAAC
ATCTTCAGACGACACTGCAGGAGTCTCTAAAGAAAATGCCAGCTGAACTC
GATGCGAGGCTAATGAAAATGGAAAATCAGCAAAAGACATTGGGCGACCA
GTTGGAAAATCAAATCAATCTCACCAAGGAATCTCAGCAGGATCAGTTGG
AAGCCCTAAAGAACGCCATGCCGATAAATTTCGAAATGCGGCTGGCTCAG
ATTGAAGAACAGCAGAAGTTACTTCAGGAAACTCTAAAGAAGATCCCAGA
GGATTTTGAACGGAAATTGCAAAAGTTGGAGCAGAATCAGAAGGATGAGC
TGACCAAGCTGGGAGCTCAGCAGTCCGCCAACCAAGTCACACTCAAGGAA
ATTTATACCAAGGTCTTCTGGCCGAAATTTGAGCGAATCGGCTCTAGACT
CTTCTACATAAATCACAAGGATGCCTACGACTGGCAATCCGCTGTAGACT
TCTGTCGTGACATGGGTGGCTATATAGCCGCCATCAAGGATCAAGAGGAG
CTGGACGCCATTTCAGCGAGACTGGACGACAAGAGCTACTGGCTGGGCAT
AAACGACTTGCAAAGCAGTAACACCTACGTATCCGTGGCATCCGGCAGGG
AAGTTGAATTCCTCAATTGGAATGCGGGCGAACCCAATCACGGCAATGAA
GATGAGAACTGTGTGGAGCTGATTAGGAGCAAAATGAACGATGATCCGTG
CCACAGAAAGAAGCATGTTATTTGTCAAACCGACAAAGAAGTTTAAAAGC
TTTCTAGACCAT
BS04613.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:19:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24Db-RA | 1080 | CG2958-PA | 1..1080 | 17..1096 | 5400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:19:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24Db-RA | 1162 | CG2958-RA | 26..1106 | 17..1097 | 5405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:19:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4188148..4189228 | 17..1097 | 5405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:19:26 has no hits.
BS04613.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:57:09 Download gff for
BS04613.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 1..1080 | 17..1096 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:33:21 Download gff for
BS04613.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 18..1106 | 7..1097 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:30 Download gff for
BS04613.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 32..1103 | 23..1094 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:57:09 Download gff for
BS04613.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 18..1106 | 7..1097 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:55 Download gff for
BS04613.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24Db-RA | 32..1103 | 23..1094 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:55 Download gff for
BS04613.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4188154..4189225 | 23..1094 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:30 Download gff for
BS04613.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4188154..4189225 | 23..1094 | 100 | | Plus |
BS04613.pep Sequence
Translation from 16 to 1095
> BS04613.pep
MFRLEKCIVYLLVACNLVESRAESTENSRSVCLLKDPPNQCGEFCLSVLQ
PLLDHIVKHQEQWNTSEALWLNETQGKLDRIQTQLAAQALSLEESAQKVP
GDIKDRLDRMEHLQTTLQESLKKMPAELDARLMKMENQQKTLGDQLENQI
NLTKESQQDQLEALKNAMPINFEMRLAQIEEQQKLLQETLKKIPEDFERK
LQKLEQNQKDELTKLGAQQSANQVTLKEIYTKVFWPKFERIGSRLFYINH
KDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSYWLGINDLQS
SNTYVSVASGREVEFLNWNAGEPNHGNEDENCVELIRSKMNDDPCHRKKH
VICQTDKEV*
BS04613.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:43:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24Db-PA | 359 | CG2958-PA | 1..359 | 1..359 | 1870 | 100 | Plus |
| CG15818-PA | 283 | CG15818-PA | 1..283 | 1..359 | 390 | 28.6 | Plus |
| lectin-22C-PB | 263 | CG42295-PB | 100..259 | 199..358 | 311 | 41 | Plus |
| CG15358-PC | 229 | CG15358-PC | 47..226 | 173..358 | 308 | 36.9 | Plus |
| CG15358-PB | 229 | CG15358-PB | 47..226 | 173..358 | 308 | 36.9 | Plus |
| CG15358-PC | 229 | CG15358-PC | 3..102 | 30..130 | 214 | 44.6 | Plus |
