Clone Sequence Records
BS04614.5prime Sequence
354 bp (353 high quality bases) assembled on 2005-12-02
> BS04614.5prime
GAAGTTATCAGTCGACATGCAATTTCAGGGCATTTCATTCCGCTTGCGCG
TAGTTGTTGTTCCCGAACCCCAAGTAGATGTTTTTCGCAATGTTTGCGCA
GTTGTGTGGGCATTTGCATTTGTATCTGAGTGCGACTGTTTGAGTCCGGA
TTGCAGGGGTGCGGATGTGTGTGGAAGTGTGAGTCGGCCAACCTGTTCGG
AACTCAAGGAAAATGAGTCAGCAACGCCGGGCCGGGCCGTGCCGGGCCGG
GCTTTCGCATCCATGAGATACATTTCGAGTAGACGCCGTAAAGTGTTTAC
CGAGGACATCGAGGTCTGCGGGGTCCTTCTTCCTTTCTGAAAGCTTTCTA
GACC
BS04614.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30017-PA | 324 | CG30017-RA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 01:24:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:24:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10871263..10871587 | 340..16 | 1625 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 01:24:06 has no hits.
BS04614.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:07 Download gff for
BS04614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-PA | 1..324 | 17..340 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:03 Download gff for
BS04614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-PA | 1..324 | 17..340 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:36:27 Download gff for
BS04614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871260..10871589 | 12..345 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:36:27 Download gff for
BS04614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871260..10871589 | 12..345 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:59:22 Download gff for
BS04614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758765..6759094 | 12..345 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:59:22 Download gff for
BS04614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758765..6759094 | 12..345 | 98 | | Minus |
BS04614.3prime Sequence
354 bp (353 high quality bases) assembled on 2005-12-02
> BS04614.3prime
ATGGTCTAGAAAGCTTTCAGAAAGGAAGAAGGACCCCGCAGACCTCGATG
TCCTCGGTAAACACTTTACGGCGTCTACTCGAAATGTATCTCATGGATGC
GAAAGCCCGGCCCGGCACGGCCCGGCCCGGCGTTGCTGACTCATTTTCCT
TGAGTTCCGAACAGGTTGGCCGACTCACACTTCCACACACATCCGCACCC
CTGCAATCCGGACTCAAACAGTCGCACTCAGATACAAATGCAAATGCCCA
CACAACTGCGCAAACATTGCGAAAAACATCTACTTGGGGTTCGGGAACAA
CAACTACGCGCAAGCGGAATGAAATGCCCTGAAATTGCATGTCGACTGAT
AACT
BS04614.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30017-PA | 324 | CG30017-RA | 1..324 | 340..17 | 1620 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 09:26:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:26:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10871263..10871587 | 17..341 | 1625 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 09:26:21 has no hits.
BS04614.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:06 Download gff for
BS04614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-PA | 1..324 | 17..340 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:01 Download gff for
BS04614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-PA | 1..324 | 17..340 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:13:52 Download gff for
BS04614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871260..10871589 | 12..345 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:13:52 Download gff for
BS04614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871260..10871589 | 12..345 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 15:54:34 Download gff for
BS04614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758765..6759094 | 12..345 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 15:54:34 Download gff for
BS04614.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758765..6759094 | 12..345 | 98 | | Plus |
BS04614.complete Sequence
356 bp (356 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634976
> BS04614.complete
GAAGTTATCAGTCGACATGCAATTTCAGGGCATTTCATTCCGCTTGCGCG
TAGTTGTTGTTCCCGAACCCCAAGTAGATGTTTTTCGCAATGTTTGCGCA
GTTGTGTGGGCATTTGCATTTGTATCTGAGTGCGACTGTTTGAGTCCGGA
TTGCAGGGGTGCGGATGTGTGTGGAAGTGTGAGTCGGCCAACCTGTTCGG
AACTCAAGGAAAATGAGTCAGCAACGCCGGGCCGGGCCGTGCCGGGCCGG
GCTTTCGCATCCATGAGATACATTTCGAGTAGACGCCGTAAAGTGTTTAC
CGAGGACATCGAGGTCTGCGGGGTCCTTCTTCCTTTCTGAAAGCTTTCTA
GACCAT
BS04614.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 00:57:15 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 00:57:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:57:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10871263..10871587 | 340..16 | 1625 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:57:14 has no hits.
BS04614.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:57:10 Download gff for
BS04614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 1..324 | 17..340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:33:22 Download gff for
BS04614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 781..1110 | 12..345 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:57:10 Download gff for
BS04614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 781..1110 | 12..345 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:48 Download gff for
BS04614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871264..10871586 | 17..339 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:48 Download gff for
BS04614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871264..10871586 | 17..339 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:03:10 Download gff for
BS04614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758769..6759091 | 17..339 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:03:10 Download gff for
BS04614.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758769..6759091 | 17..339 | 100 | | Minus |
BS04614.pep Sequence
Translation from 16 to 339
> BS04614.pep
MQFQGISFRLRVVVVPEPQVDVFRNVCAVVWAFAFVSECDCLSPDCRGAD
VCGSVSRPTCSELKENESATPGRAVPGRAFASMRYISSRRRKVFTEDIEV
CGVLLPF*
Sequence BS04614.pep has no blast hits.