Clone Sequence Records
BS04626.3prime Sequence
881 bp (860 high quality bases) assembled on 2005-12-02
> BS04626.3prime
ATGGTCTAGAAAGCTTTTAGTACAGTCCACAGCCGCGCAGGTTGTTTGCT
ATGATGACATCGGTGACAGCATCGAATACAAACTGAATGTTATTGGTATC
TGTGGCACACGTCATGTGGCAGTAGATTTCTTTTGAGGTTGATTTGTTTT
TCGCTTCAAATTGAGCCTGAATGTAAGCAGCCGCCTCGCCGTACTCCTGT
CCACCTGTGTATTCGGGGAAGCAAATCGTCAGGGGACTCTTGCGAATCTT
CTCCTCGAACAAATCCTTCTTGTTCAGGAATAGAATAATCGAGGTGTCCG
TGAACCATTTGTTGTTACAGATCGAGTCAAACAGTTTCAGCGACTCTTGC
ATGCGGTTCGTGGTTTCATCCTCATGCAAGACTTGATCGTACTCGGACAT
GGCCACGCAGAAAATGATCGCCGTGACATCTTCGAAGCAGTGTATCCATT
TCTTACGTTCCGAGCGCTGACCGCCCACGTCAAACAATTTAAAGTTGAGG
TTTTTGAAGGAGAAGTGTACCTCAACGATGCCAGTGGTCTTGACGCGAGT
GCGCAAGATATCTTGTTCAGTTGGCTGGTAATCCTTGGCGCCTAACCGAT
CCAAATCGTCCAGGAAATATTTTGCGGAATCGTTTAGTTGGTATTCGTTG
CTGCGCGAGAAGCACTCCTGGACACCGGCGTCCTGCCAGAGGCGTTTCAT
GGCGGCCAGCAGCTCCTCCGAGAAGGGCTCGGTGTCGTGCATGCGTTGGC
ATACGTCGAACACCATCTTGGCATCGCTCTCCCGCTCGTTATTGCTGTAC
TGAATACTTANGGTTGGCATCGCGCGCAATATTGCAACTAATGATTGTAT
TGTGTTGCTGTAGACAACCGGTCGATATTGT
BS04626.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2204-PB | 1065 | G-oalpha47A-RB | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
CG2204-PC | 1065 | G-oalpha47A-RC | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
CG2204-PA | 1065 | G-oalpha47A-RA | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
CG2204-PD | 1065 | G-oalpha47A-RD | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
CG2204-PE | 1065 | G-oalpha47A-RE | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
CG2204-PF | 1065 | G-oalpha47A-RF | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
CG2204-PG | 1065 | G-oalpha47A-RG | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
CG2204-PH | 1065 | G-oalpha47A-RH | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
CG2204-PI | 1065 | G-oalpha47A-RI | 201..1065 | 881..17 | 4281 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:33:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-RI | 5457 | CG2204-RI | 592..1456 | 881..17 | 4299 | 99.8 | Minus |
Galphao-RH | 2194 | CG2204-RH | 344..1208 | 881..17 | 4299 | 99.8 | Minus |
Galphao-RG | 2322 | CG2204-RG | 472..1336 | 881..17 | 4299 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:33:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10461510..10461700 | 207..17 | 955 | 100 | Minus |
2R | 25286936 | 2R | 10448470..10448632 | 780..618 | 815 | 100 | Minus |
2R | 25286936 | 2R | 10461289..10461446 | 359..202 | 790 | 100 | Minus |
2R | 25286936 | 2R | 10461096..10461225 | 488..359 | 650 | 100 | Minus |
2R | 25286936 | 2R | 10460903..10461031 | 617..489 | 645 | 100 | Minus |
2R | 25286936 | 2R | 10448281..10448383 | 881..779 | 489 | 98.1 | Minus |
3L | 28110227 | 3L | 6973588..6973731 | 203..346 | 225 | 77.1 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:33:38 has no hits.
BS04626.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:18 Download gff for
BS04626.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2204-PF | 201..1065 | 17..881 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:18 Download gff for
BS04626.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2204-PI | 201..1065 | 17..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:50:31 Download gff for
BS04626.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RG | 472..1345 | 9..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:51 Download gff for
BS04626.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RG | 472..1345 | 9..881 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:51 Download gff for
BS04626.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10448472..10448632 | 618..778 | 100 | -> | Minus |
2R | 10460903..10461031 | 489..617 | 100 | -> | Minus |
2R | 10461096..10461225 | 359..488 | 100 | -> | Minus |
2R | 10461290..10461443 | 205..358 | 100 | -> | Minus |
2R | 10461513..10461709 | 9..204 | 97 | | Minus |
2R | 10448281..10448383 | 779..881 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:50:31 Download gff for
BS04626.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6348795..6348948 | 205..358 | 100 | -> | Minus |
arm_2R | 6335786..6335888 | 779..881 | 98 | -> | Minus |
arm_2R | 6335977..6336137 | 618..778 | 100 | -> | Minus |
arm_2R | 6348408..6348536 | 489..617 | 100 | -> | Minus |
arm_2R | 6348601..6348730 | 359..488 | 100 | -> | Minus |
arm_2R | 6349018..6349214 | 9..204 | 97 | | Minus |
BS04626.5prime Sequence
960 bp (758 high quality bases) assembled on 2005-12-02
> BS04626.5prime
GAAGTTATCAGTCGACATGGGCTGCGCACAGTCTGCCGAGGAGCGAGCCG
CAGCCGCCAGGAGTCGCCTCATCGAGCGCAATCTCAAGGAGGACGGCATA
CAGGCGGCAAAGGACATCAAACTCCTGCTGCTGGGTGCCGGTGAGTCGGG
CAAGAGCACAATAGTCAAACAGATGAAAATCATTCACGAGAGCGGCTTCA
CTGCTGAGGACTTTAAACAATATCGACCGGTTGTCTACAGCAACACAATA
CAATCATTAGTTGCAATATTGCGCGCGATGCCAACCCTAAGTATTCAGTA
CAGCAATAACGAGCGGGAGAGCGATGCCAAGATGGTGTTCGACGTATGCC
AACGCATGCACGACACCGAGCCCTTCTCGGAGGAGCTGCTGGCCGCCATG
AAACGCCTCTGGCAGGACGCCGGTGTCCAGGAGTGCTTCTCGCGCAGCAA
CGAATACCAACTAAACGATTCCGCAAAATATTTCCTGGACGATTTGGATC
GGTTAGGCGCCAAGGATTACCAGCCAACTGAACAAGATATCTTGCGCACT
CGCGTCAAGACCACTGGCATCGTTGAGGTACACTTCTCCTTCAAAAACCT
CAACTTTAAATTGTTTGACGTGGGCGGTCAGCGCTCGGAACGTAAGAAAT
GGATACACTGCTTCGAAGATGTCACGGCGATCATTTTCTGCGTGGCCATG
TCCGAGTACGATCAAGTCTTGCATGAGGATGAAACCACGAACCGCATGCA
AGAGTCGCTGAAACTGTTTGACTCGATCTGTAACAACAAATGGTTCACGG
ACACCTCGATTATTCTATTCCTGAACAAGAAGGATTTGTTCGAGGAGAAG
ATTCGCAAGAGTCCCCTGACGATTTGCTTCCCCGAATACACAGGTGGACA
GGAGTACGGCGAGGCGGCTGCTTACATTCAGGCTCAATTTGAAGCGAAAA
ACAAATCACC
BS04626.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2204-PC | 1065 | G-oalpha47A-RC | 1..942 | 17..958 | 4660 | 99.7 | Plus |
CG2204-PA | 1065 | G-oalpha47A-RA | 1..942 | 17..958 | 4660 | 99.7 | Plus |
CG2204-PI | 1065 | G-oalpha47A-RI | 1..942 | 17..958 | 4660 | 99.7 | Plus |
CG2204-PB | 1065 | G-oalpha47A-RB | 64..942 | 80..958 | 4195 | 99 | Plus |
CG2204-PD | 1065 | G-oalpha47A-RD | 64..942 | 80..958 | 4195 | 99 | Plus |
CG2204-PE | 1065 | G-oalpha47A-RE | 64..942 | 80..958 | 4195 | 99 | Plus |
CG2204-PF | 1065 | G-oalpha47A-RF | 64..942 | 80..958 | 4195 | 99 | Plus |
CG2204-PG | 1065 | G-oalpha47A-RG | 64..942 | 80..958 | 4195 | 99 | Plus |
CG2204-PH | 1065 | G-oalpha47A-RH | 64..942 | 80..958 | 4195 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:01:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-RI | 5457 | CG2204-RI | 391..1333 | 16..958 | 4685 | 99.8 | Plus |
Galphao-RA | 3462 | CG2204-RA | 379..1321 | 16..958 | 4685 | 99.8 | Plus |
Galphao-RC | 2367 | CG2204-RC | 316..1258 | 16..958 | 4685 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:01:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10448198..10448383 | 134..319 | 900 | 98.9 | Plus |
2R | 25286936 | 2R | 10448470..10448632 | 318..480 | 815 | 100 | Plus |
2R | 25286936 | 2R | 10461289..10461446 | 739..896 | 790 | 100 | Plus |
2R | 25286936 | 2R | 10461096..10461225 | 610..739 | 650 | 100 | Plus |
2R | 25286936 | 2R | 10460903..10461031 | 481..609 | 645 | 100 | Plus |
2R | 25286936 | 2R | 10445506..10445627 | 16..137 | 610 | 100 | Plus |
2R | 25286936 | 2R | 10461510..10461577 | 891..958 | 340 | 100 | Plus |
3L | 28110227 | 3L | 6973588..6973731 | 895..752 | 225 | 77.1 | Minus |
2R | 25286936 | 2R | 10439577..10439633 | 80..136 | 195 | 89.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 09:01:05 has no hits.
BS04626.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:19 Download gff for
BS04626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2204-PI | 1..944 | 17..960 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:20 Download gff for
BS04626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2204-PI | 1..944 | 17..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:25:53 Download gff for
BS04626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RC | 316..1260 | 16..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:43:06 Download gff for
BS04626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RC | 316..1260 | 16..960 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:43:06 Download gff for
BS04626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10461290..10461443 | 740..893 | 100 | -> | Plus |
2R | 10461513..10461579 | 894..960 | 98 | | Plus |
2R | 10445506..10445624 | 16..134 | 100 | -> | Plus |
2R | 10448199..10448383 | 135..319 | 98 | -> | Plus |
2R | 10448472..10448632 | 320..480 | 100 | -> | Plus |
2R | 10460903..10461031 | 481..609 | 100 | -> | Plus |
2R | 10461096..10461225 | 610..739 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:25:53 Download gff for
BS04626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6335977..6336137 | 320..480 | 100 | -> | Plus |
arm_2R | 6348408..6348536 | 481..609 | 100 | -> | Plus |
arm_2R | 6348601..6348730 | 610..739 | 100 | -> | Plus |
arm_2R | 6348795..6348948 | 740..893 | 100 | -> | Plus |
arm_2R | 6349018..6349084 | 894..960 | 98 | | Plus |
arm_2R | 6333011..6333129 | 16..134 | 100 | -> | Plus |
arm_2R | 6335704..6335888 | 135..319 | 98 | -> | Plus |
BS04626.complete Sequence
1097 bp (1097 high quality bases) assembled on 2006-02-02
GenBank Submission: MN238599
> BS04626.complete
GAAGTTATCAGTCGACATGGGCTGCGCACAGTCTGCCGAGGAGCGAGCCG
CAGCCGCCAGGAGTCGCCTCATCGAGCGCAATCTCAAGGAGGACGGCATA
CAGGCGGCAAAGGACATCAAACTCCTGCTGCTGGGTGCCGGTGAGTCGGG
CAAGAGCACAATAGTCAAACAGATGAAAATCATTCACGAGAGCGGCTTCA
CTGCTGAGGACTTTAAACAATATCGACCGGTTGTCTACAGCAACACAATA
CAATCATTAGTTGCAATATTGCGCGCGATGCCAACCCTAAGTATTCAGTA
CAGCAATAACGAGCGGGAGAGCGATGCCAAGATGGTGTTCGACGTATGCC
AACGCATGCACGACACCGAGCCCTTCTCGGAGGAGCTGCTGGCCGCCATG
AAACGCCTCTGGCAGGACGCCGGTGTCCAGGAGTGCTTCTCGCGCAGCAA
CGAATACCAACTAAACGATTCCGCAAAATATTTCCTGGACGATTTGGATC
GGTTAGGCGCCAAGGATTACCAGCCAACTGAACAAGATATCTTGCGCACT
CGCGTCAAGACCACTGGCATCGTTGAGGTACACTTCTCCTTCAAAAACCT
CAACTTTAAATTGTTTGACGTGGGCGGTCAGCGCTCGGAACGTAAGAAAT
GGATACACTGCTTCGAAGATGTCACGGCGATCATTTTCTGCGTGGCCATG
TCCGAGTACGATCAAGTCTTGCATGAGGATGAAACCACGAACCGCATGCA
AGAGTCGCTGAAACTGTTTGACTCGATCTGTAACAACAAATGGTTCACGG
ACACCTCGATTATTCTATTCCTGAACAAGAAGGATTTGTTCGAGGAGAAG
ATTCGCAAGAGTCCCCTGACGATTTGCTTCCCCGAATACACAGGTGGACA
GGAGTACGGCGAGGCGGCTGCTTACATTCAGGCTCAATTTGAAGCGAAAA
ACAAATCAACCTCAAAAGAAATCTACTGCCACATGACGTGTGCCACAGAT
ACCAATAACATTCAGTTTGTATTCGATGCTGTCACCGATGTCATCATAGC
AAACAACCTGCGCGGCTGTGGACTGTACTAAAAGCTTTCTAGACCAT
BS04626.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:08:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-RI | 1065 | CG2204-PI | 1..1065 | 17..1081 | 5295 | 99.8 | Plus |
Galphao-RA | 1065 | CG2204-PA | 1..1065 | 17..1081 | 5295 | 99.8 | Plus |
Galphao-RC | 1065 | CG2204-PC | 1..1065 | 17..1081 | 5295 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-RI | 5457 | CG2204-RI | 391..1456 | 16..1081 | 5300 | 99.8 | Plus |
Galphao-RA | 3462 | CG2204-RA | 379..1444 | 16..1081 | 5300 | 99.8 | Plus |
Galphao-RC | 2367 | CG2204-RC | 316..1381 | 16..1081 | 5300 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10461510..10461700 | 891..1081 | 955 | 100 | Plus |
2R | 25286936 | 2R | 10448198..10448383 | 134..319 | 900 | 98.9 | Plus |
2R | 25286936 | 2R | 10448470..10448632 | 318..480 | 815 | 100 | Plus |
2R | 25286936 | 2R | 10461289..10461446 | 739..896 | 790 | 100 | Plus |
2R | 25286936 | 2R | 10461096..10461225 | 610..739 | 650 | 100 | Plus |
2R | 25286936 | 2R | 10460903..10461031 | 481..609 | 645 | 100 | Plus |
2R | 25286936 | 2R | 10445506..10445627 | 16..137 | 610 | 100 | Plus |
3L | 28110227 | 3L | 6973588..6973731 | 895..752 | 225 | 77.1 | Minus |
2R | 25286936 | 2R | 10439577..10439633 | 80..136 | 195 | 89.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:08:29 has no hits.
BS04626.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:56:54 Download gff for
BS04626.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-oalpha47A-RI | 1..1065 | 17..1081 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:32:46 Download gff for
BS04626.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-oalpha47A-RI | 111..1173 | 17..1079 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:37:38 Download gff for
BS04626.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RC | 317..1379 | 17..1079 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:56:54 Download gff for
BS04626.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-oalpha47A-RI | 110..1184 | 16..1089 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:00:46 Download gff for
BS04626.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RC | 317..1379 | 17..1079 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:00:46 Download gff for
BS04626.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10461096..10461225 | 610..739 | 100 | -> | Plus |
2R | 10461290..10461443 | 740..893 | 100 | -> | Plus |
2R | 10461513..10461698 | 894..1079 | 100 | | Plus |
2R | 10448199..10448383 | 135..319 | 98 | -> | Plus |
2R | 10445507..10445624 | 17..134 | 100 | -> | Plus |
2R | 10448472..10448632 | 320..480 | 100 | -> | Plus |
2R | 10460903..10461031 | 481..609 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:37:38 Download gff for
BS04626.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6333012..6333129 | 17..134 | 100 | -> | Plus |
arm_2R | 6335704..6335888 | 135..319 | 98 | -> | Plus |
arm_2R | 6335977..6336137 | 320..480 | 100 | -> | Plus |
arm_2R | 6348408..6348536 | 481..609 | 100 | -> | Plus |
arm_2R | 6348601..6348730 | 610..739 | 100 | -> | Plus |
arm_2R | 6348795..6348948 | 740..893 | 100 | -> | Plus |
arm_2R | 6349018..6349203 | 894..1079 | 100 | | Plus |
BS04626.pep Sequence
Translation from 16 to 1080
> BS04626.pep
MGCAQSAEERAAAARSRLIERNLKEDGIQAAKDIKLLLLGAGESGKSTIV
KQMKIIHESGFTAEDFKQYRPVVYSNTIQSLVAILRAMPTLSIQYSNNER
ESDAKMVFDVCQRMHDTEPFSEELLAAMKRLWQDAGVQECFSRSNEYQLN
DSAKYFLDDLDRLGAKDYQPTEQDILRTRVKTTGIVEVHFSFKNLNFKLF
DVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKL
FDSICNNKWFTDTSIILFLNKKDLFEEKIRKSPLTICFPEYTGGQEYGEA
AAYIQAQFEAKNKSTSKEIYCHMTCATDTNNIQFVFDAVTDVIIANNLRG
CGLY*
BS04626.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:12:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-PI | 354 | CG2204-PI | 1..354 | 1..354 | 1838 | 100 | Plus |
Galphao-PA | 354 | CG2204-PA | 1..354 | 1..354 | 1838 | 100 | Plus |
Galphao-PC | 354 | CG2204-PC | 1..354 | 1..354 | 1838 | 100 | Plus |
Galphao-PH | 354 | CG2204-PH | 1..354 | 1..354 | 1806 | 98 | Plus |
Galphao-PG | 354 | CG2204-PG | 1..354 | 1..354 | 1806 | 98 | Plus |