Clone Sequence Records
BS04629.3prime Sequence
966 bp (850 high quality bases) assembled on 2005-12-02
> BS04629.3prime
ATGGTCTAGAAAGCTTTTAGATATCGTCGATGTTCACGTCGTCCTCGTCA
TCCTCGTCGCCTGCAACAGCGCGTGGAATTCCGCGTTGGACGACCCGTTG
ACCGCCACGTTGGCCGGCACTGGAAACGTAGTTATCCTCCTCGGATTCAT
CGTCCTCCTCCTCCTCACTTTCGGAGGACTCTTCCTCGGCATTCTTCAGC
CAGAGAACGAATGGCATAGCTTTCTCGTGTATTTCGGCAGCAATATTTTT
CGAGACATGTCGTTTGCTAACCTTCTGTGCCCACTCCAGTATGACGGCCT
CATCGAGTATGTCCAGATCATAAAACAATTTGAAGATTCCAGCAACCTTG
CTCATCAATATACCCTTATGCAGCTCTACAGTTTGCTCCACTCCACCAAT
TAGATAGCGCTGTGCTTTTGGATTATTGAGGGTGAAGCGAAGAAGCAAAG
GGCGATTCTTCTGCACGTCCTTGATGATGTTTTCAGTGAAAAGCAGCTCG
GCGAGAACCAATGGAGCCTTGTTAATAATATCCAAGCGTTCGGCTTCAAT
CACCAGCTCCTTGTGAGTTTGCACATCATCCAATTGCTTCTTGTCCCGCT
TGTCCTTAACCAACTCGTAGAAAATATCAATGCGCTCCTTTTCAGTTTTA
TCATAGTCATCCGAAATAGTCATACCCTTAGCACCATCAGTCAGATCTTG
CAAACGAGCACGAATAGCCTCCTTCGAAACATCGACACTCCATCCCTCAT
CGTCGTCATCCTTGGCTGTTTTCTCCGGAATAGCTGCGCTAATCTCGGCC
TCAGTTTGGCTAGCCTGATTTGTGCCGTTGCCGCCATCTGATTCACCGCC
AGAGTTGTTGGCCAAAGAGTTATTGGTCATGGAGCCATCGGCGTTATCGT
TCTTCTGCTTCTGTTTCCTCGAGCGTTTGCCCTCGGTTAGCGATGATCCT
TGGGGCGGCCGGGATC
BS04629.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9177-PD | 1395 | eIF5-RD | 458..1395 | 954..17 | 4690 | 100 | Minus |
CG9177-PC | 1395 | eIF5-RC | 458..1395 | 954..17 | 4690 | 100 | Minus |
CG9177-PA | 1395 | eIF5-RA | 458..1395 | 954..17 | 4690 | 100 | Minus |
CG9177-PE | 1395 | eIF5-RE | 458..1395 | 954..17 | 4690 | 100 | Minus |
CG9177-PB | 1395 | eIF5-RB | 458..1395 | 954..17 | 4690 | 100 | Minus |
CG9177-PG | 1395 | eIF5-RG | 458..1395 | 954..17 | 4690 | 100 | Minus |
CG9177-PF | 1395 | eIF5-RF | 458..1395 | 954..17 | 4690 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 12:54:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF5-RF | 2383 | CG9177-RF | 1320..2267 | 962..14 | 4720 | 99.9 | Minus |
eIF5-RG | 2521 | CG9177-RG | 1458..2405 | 962..14 | 4720 | 99.9 | Minus |
eIF5-RB | 2588 | CG9177-RB | 1525..2472 | 962..14 | 4720 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 12:54:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15987282..15987991 | 14..723 | 3550 | 100 | Plus |
X | 23542271 | X | 15988067..15988300 | 721..954 | 1170 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 12:54:23 has no hits.
BS04629.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:24 Download gff for
BS04629.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-PE | 447..1395 | 17..966 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:27 Download gff for
BS04629.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9177-PF | 447..1395 | 17..966 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:55:03 Download gff for
BS04629.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RB | 1521..2477 | 9..966 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:45:26 Download gff for
BS04629.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RB | 1521..2477 | 9..966 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:45:26 Download gff for
BS04629.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15987277..15987989 | 9..721 | 99 | <- | Plus |
X | 15988068..15988309 | 722..966 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:55:03 Download gff for
BS04629.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15882101..15882342 | 722..966 | 98 | | Plus |
arm_X | 15881310..15882022 | 9..721 | 99 | <- | Plus |
BS04629.5prime Sequence
935 bp (783 high quality bases) assembled on 2005-11-29
> BS04629.5prime
GAAGTTATCAGTCGACATGGCCACCGTAAACGTAAACCGCAGTGTGACGG
ACATCTTCTATCGCTACAAGATGCCACGTCTGCAGGCAAAGGTCGAGGGC
AAAGGAAACGGCATTAAGACCGTGCTGGTCAACATGGCGGAAGTGGCTAG
GGCCATCGGACGCCCGGCCACCTATCCAACCAAGTACTTTGGTTGCGAGC
TGGGCGCCCAGACGCTGTTCGATCACAAGAATGAGCGCTTTGTTGTGAAT
GGATCGCATGATGTGAACAAGTTGCAGGATTTGTTGGATGGTTTTATTCG
CAAGTTTGTGTTATGCCCCGAGTGCGACAATCCGGAGACCAATTTAACTG
TGTCGGCCAAAAACCAGACCATTTCGCAGTCTTGCAAGGCATGCGGCTTC
CATGGTCTGCTCAAGGTTAACCATAAAGTGAACACATTCATTGTGAAGAA
CCCCCCGTCATTGAATCCGGCCGCCCAAGGATCATCGCTAACCGAGGGCA
AACGCTCGAGGAAACAGAAGCAGAAGAACGATAACGCCGATGGCTCCATG
ACCAATAACTCTTTGGCCAACAACTCTGGCGGTGAATCAGATGGCGGCAA
CGGCACAAATCAGGCTAGCCAAACTGAGGCCGAGATTAGCGCAGCTATTC
CGGAGAAAACAGCCAAGGATGACGACGATGAGGGATGGAGTGTCGATGTT
TCGAAGGAGGCTATTCGTGCTCGTTTGCAAGATCTGACTGATGGTGCTAA
GGGTATGACTATTTCGGATGACTATGATAAAACTGAAAAGGAGCGCATTG
ATATTTTCTACGAGTTGGTTAAGGACAAGCGGGACAAGAAGCAATTGGAT
GATGTGCAAACTCACAAGGAGCTGGTGATTGAAGCCGAACGCTTGGATAT
TATTAACAAGGCTCCATTTGGTCTCGCCGAGCTGC
BS04629.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9177-PD | 1395 | eIF5-RD | 1..919 | 17..935 | 4545 | 99.7 | Plus |
CG9177-PC | 1395 | eIF5-RC | 1..919 | 17..935 | 4545 | 99.7 | Plus |
CG9177-PA | 1395 | eIF5-RA | 1..919 | 17..935 | 4545 | 99.7 | Plus |
CG9177-PE | 1395 | eIF5-RE | 1..919 | 17..935 | 4545 | 99.7 | Plus |
CG9177-PB | 1395 | eIF5-RB | 1..919 | 17..935 | 4545 | 99.7 | Plus |
CG9177-PG | 1395 | eIF5-RG | 1..919 | 17..935 | 4545 | 99.7 | Plus |
CG9177-PF | 1395 | eIF5-RF | 1..919 | 17..935 | 4545 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:29:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF5-RF | 2383 | CG9177-RF | 870..1788 | 17..935 | 4565 | 99.8 | Plus |
eIF5-RG | 2521 | CG9177-RG | 1008..1926 | 17..935 | 4565 | 99.8 | Plus |
eIF5-RB | 2588 | CG9177-RB | 1075..1993 | 17..935 | 4565 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:29:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15988067..15988546 | 707..228 | 2400 | 100 | Minus |
X | 23542271 | X | 15987761..15987991 | 935..705 | 1125 | 99.1 | Minus |
X | 23542271 | X | 15988617..15988829 | 229..17 | 1065 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:29:30 has no hits.
BS04629.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:25 Download gff for
BS04629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-PE | 1..919 | 17..935 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:29 Download gff for
BS04629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9177-PF | 1..919 | 17..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:37:07 Download gff for
BS04629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RB | 1070..1993 | 12..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:02:17 Download gff for
BS04629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RB | 1070..1993 | 12..935 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:02:17 Download gff for
BS04629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15987761..15987989 | 707..935 | 99 | <- | Minus |
X | 15988068..15988544 | 230..706 | 100 | <- | Minus |
X | 15988617..15988834 | 12..229 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:37:07 Download gff for
BS04629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15881794..15882022 | 707..935 | 99 | <- | Minus |
arm_X | 15882101..15882577 | 230..706 | 100 | <- | Minus |
arm_X | 15882650..15882867 | 12..229 | 99 | | Minus |
BS04629.complete Sequence
1427 bp (1427 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634981
> BS04629.complete
GAAGTTATCAGTCGACATGGCCACCGTAAACGTAAACCGCAGTGTGACGG
ACATCTTCTATCGCTACAAGATGCCACGTCTGCAGGCAAAGGTCGAGGGC
AAAGGAAACGGCATTAAGACCGTGCTGGTCAACATGGCGGAAGTGGCTAG
GGCCATCGGACGCCCGGCCACCTATCCAACCAAGTACTTTGGTTGCGAGC
TGGGCGCCCAGACGCTGTTCGATCACAAGAATGAGCGCTTTGTTGTGAAT
GGATCGCATGATGTGAACAAGTTGCAGGATTTGTTGGATGGTTTTATTCG
CAAGTTTGTGTTATGCCCCGAGTGCGACAATCCGGAGACCAATTTAACTG
TGTCGGCCAAAAACCAGACCATTTCGCAGTCTTGCAAGGCATGCGGCTTC
CATGGTCTGCTCAAGGTTAACCATAAAGTGAACACATTCATTGTGAAGAA
CCCCCCGTCATTGAATCCGGCCGCCCAAGGATCATCGCTAACCGAGGGCA
AACGCTCGAGGAAACAGAAGCAGAAGAACGATAACGCCGATGGCTCCATG
ACCAATAACTCTTTGGCCAACAACTCTGGCGGTGAATCAGATGGCGGCAA
CGGCACAAATCAGGCTAGCCAAACTGAGGCCGAGATTAGCGCAGCTATTC
CGGAGAAAACAGCCAAGGATGACGACGATGAGGGATGGAGTGTCGATGTT
TCGAAGGAGGCTATTCGTGCTCGTTTGCAAGATCTGACTGATGGTGCTAA
GGGTATGACTATTTCGGATGACTATGATAAAACTGAAAAGGAGCGCATTG
ATATTTTCTACGAGTTGGTTAAGGACAAGCGGGACAAGAAGCAATTGGAT
GATGTGCAAACTCACAAGGAGCTGGTGATTGAAGCCGAACGCTTGGATAT
TATTAACAAGGCTCCATTGGTTCTCGCCGAGCTGCTTTTCACTGAAAACA
TCATCAAGGACGTGCAGAAGAATCGCCCTTTGCTTCTTCGCTTCACCCTC
AATAATCCAAAAGCACAGCGCTATCTAATTGGTGGAGTGGAGCAAACTGT
AGAGCTGCATAAGGGTATATTGATGAGCAAGGTTGCTGGAATCTTCAAAT
TGTTTTATGATCTGGACATACTCGATGAGGCCGTCATACTGGAGTGGGCA
CAGAAGGTTAGCAAACGACATGTCTCGAAAAATATTGCTGCCGAAATACA
CGAGAAAGCTATGCCATTCGTTCTCTGGCTGAAGAATGCCGAGGAAGAGT
CCTCCGAAAGTGAGGAGGAGGAGGACGATGAATCCGAGGAGGATAACTAC
GTTTCCAGTGCCGGCCAACGTGGCGGTCAACGGGTCGTCCAACGCGGAAT
TCCACGCGCTGTTGCAGGCGACGAGGATGACGAGGACGACGTGAACATCG
ACGATATCTAAAAGCTTTCTAGACCAT
BS04629.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:08:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF5-RF | 1395 | CG9177-PF | 1..1395 | 17..1411 | 6975 | 100 | Plus |
eIF5-RG | 1395 | CG9177-PG | 1..1395 | 17..1411 | 6975 | 100 | Plus |
eIF5-RB | 1395 | CG9177-PB | 1..1395 | 17..1411 | 6975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:08:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF5-RF | 2383 | CG9177-RF | 870..2267 | 17..1414 | 6990 | 100 | Plus |
eIF5-RG | 2521 | CG9177-RG | 1008..2405 | 17..1414 | 6990 | 100 | Plus |
eIF5-RB | 2588 | CG9177-RB | 1075..2472 | 17..1414 | 6990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:08:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15987282..15987991 | 1414..705 | 3550 | 100 | Minus |
X | 23542271 | X | 15988067..15988546 | 707..228 | 2400 | 100 | Minus |
X | 23542271 | X | 15988617..15988829 | 229..17 | 1065 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 11:08:08 has no hits.
BS04629.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:56:57 Download gff for
BS04629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RA | 1..1395 | 17..1411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:33:10 Download gff for
BS04629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RA | 1015..2422 | 12..1419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:45:08 Download gff for
BS04629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RB | 1075..2467 | 17..1409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:56:57 Download gff for
BS04629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RA | 1015..2422 | 12..1419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:31 Download gff for
BS04629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF5-RB | 1075..2467 | 17..1409 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:39:31 Download gff for
BS04629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15987287..15987989 | 707..1409 | 100 | <- | Minus |
X | 15988068..15988544 | 230..706 | 100 | <- | Minus |
X | 15988617..15988829 | 17..229 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:45:08 Download gff for
BS04629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15881320..15882022 | 707..1409 | 100 | <- | Minus |
arm_X | 15882101..15882577 | 230..706 | 100 | <- | Minus |
arm_X | 15882650..15882862 | 17..229 | 100 | | Minus |
BS04629.pep Sequence
Translation from 16 to 1410
> BS04629.pep
MATVNVNRSVTDIFYRYKMPRLQAKVEGKGNGIKTVLVNMAEVARAIGRP
ATYPTKYFGCELGAQTLFDHKNERFVVNGSHDVNKLQDLLDGFIRKFVLC
PECDNPETNLTVSAKNQTISQSCKACGFHGLLKVNHKVNTFIVKNPPSLN
PAAQGSSLTEGKRSRKQKQKNDNADGSMTNNSLANNSGGESDGGNGTNQA
SQTEAEISAAIPEKTAKDDDDEGWSVDVSKEAIRARLQDLTDGAKGMTIS
DDYDKTEKERIDIFYELVKDKRDKKQLDDVQTHKELVIEAERLDIINKAP
LVLAELLFTENIIKDVQKNRPLLLRFTLNNPKAQRYLIGGVEQTVELHKG
ILMSKVAGIFKLFYDLDILDEAVILEWAQKVSKRHVSKNIAAEIHEKAMP
FVLWLKNAEEESSESEEEEDDESEEDNYVSSAGQRGGQRVVQRGIPRAVA
GDEDDEDDVNIDDI*
BS04629.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:43:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF5-PF | 464 | CG9177-PF | 1..464 | 1..464 | 2382 | 100 | Plus |
eIF5-PG | 464 | CG9177-PG | 1..464 | 1..464 | 2382 | 100 | Plus |
eIF5-PB | 464 | CG9177-PB | 1..464 | 1..464 | 2382 | 100 | Plus |
eIF5-PE | 464 | CG9177-PE | 1..464 | 1..464 | 2382 | 100 | Plus |
eIF5-PA | 464 | CG9177-PA | 1..464 | 1..464 | 2382 | 100 | Plus |