Clone BS04632 Report

Search the DGRC for BS04632

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:46
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG5114-RA
Protein status:BS04632.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS04632.3prime Sequence

932 bp (830 high quality bases) assembled on 2005-12-02

> BS04632.3prime
ATGGTCTAGAAAGCTTCTAATCGCCCAGCGCCGGCACCTTGAATATCTTG
GCCGTGTTGTCCTCGGATACCGTTAGCAATAGATTTTCCTGAGGCTTGTA
GACAAACTCGTAGATGTGATAGTAGTGTCCCGTCAGAGTGAATTTCAGAA
TTCCTGTGCGTGCGTCGAATGCGTTCAGATTTCCCTGCGAGGTGGCCGCA
AGTATCGTGTGGTCGTTCAACCATTTGATCCTTATGACAGCATCATTGGG
AACTGGATTTTCGCATATGGTACGCAACGCTGATTTGGCATAGTCCCAGA
TGGATATCCTGCCGTCCAGCGAGCCACAGGCAAAGAGCTTTAGATCCGCC
GAGGAGGGAGCAAAGGCCAGACACTCAATACCGTGTTCCGACTGGATTGT
GCTAACCGGACCGTTGTTAGTGCAGAACAGCATTTTTCCGGACGCCTCAG
CGCAGACGTAGAAGGGCGATTCCCTTTCGCAGGCCACCACCGCGTGCGTG
ATCTCGCCGAAACCCATTGGATGCGATTCGTTTACGTCAATGAGCACCTG
ACAGCTCTTGAGATCCCACAGCTTTACGGATCCGTTCACGTAGGCCGTGA
ACAGCTTTTTGCCATCCCCACTGAGCTCTCCGGACTCGCAACGCGAAGAT
TGTCCCGGCAGGATTTTGCATTCACCGCTGGGTATGCGGAAAACGAAGAC
CTCTCCGCTGTCACTACCCGCCAGCAGGATGTGGGCAGCTCGATGCCAGA
AGAGCCAGGACATGTCGCTCATGGAGTACTCCCAGATTTTAGTCAGGATC
GGACGTTCGTCGTGCTTTTCACTGACCTTGAAGACAAACAGATCGCCGGC
TAGATCACCGGTGGCCAAATAGACGCCGTCGTGACTGAAATGCGTTTCCG
TGACGGTGTCCTTGTGCTCCGTGATCTCGTAG

BS04632.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-PA 1278 CG5114-RA 363..1278 932..17 4530 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 02:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-RA 1440 CG5114-RA 463..1378 932..17 4550 99.8 Minus
CG5114-RB 1500 CG5114-RB 463..957 932..438 2475 100 Minus
CG5114-RB 1500 CG5114-RB 1017..1438 438..17 2080 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 02:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14983297..14983791 932..438 2475 100 Minus
3L 28110227 3L 14984209..14984424 232..17 1065 99.5 Minus
3L 28110227 3L 14983912..14984121 439..230 1035 99.5 Minus
Blast to na_te.dros performed on 2015-02-09 02:32:25 has no hits.

BS04632.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:27 Download gff for BS04632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5114-PA 363..1278 17..932 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:32 Download gff for BS04632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5114-PA 363..1278 17..932 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 06:06:01 Download gff for BS04632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 463..1388 7..932 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:17:02 Download gff for BS04632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 463..1388 7..932 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:17:02 Download gff for BS04632.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 14983297..14983790 439..932 100 -> Minus
3L 14983913..14984120 231..438 99 -> Minus
3L 14984211..14984434 7..230 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 06:06:01 Download gff for BS04632.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14976397..14976890 439..932 100 -> Minus
arm_3L 14977013..14977220 231..438 99 -> Minus
arm_3L 14977311..14977534 7..230 97   Minus

BS04632.5prime Sequence

890 bp (792 high quality bases) assembled on 2005-11-29

> BS04632.5prime
GAAGTTATCAGTCGACATGCGTGACAACACACCGCCACACCGGCCAGATT
TCGATGACGGCGACGACGAACTCCAGGAGATAATTGAGCTGGAGGAGCAG
CCGCTGGACGAAGATGACGACGATTTGGAGGAGGTGACGCTGGAGCAACT
GGAGGCCCGGCTTGCAATGGCCGGTGGCGATGATGATGAAGAGGAGGACG
AGGAGGAGCTACGTGACCGTGAGAGAATAGCAGCCATCACGGACGAAGCT
ACGGTCACTTTCAAGAAGCACACCGCTCCTGTTTTCGCCTGCAGTCTGCA
TCCCAACTACAATTGGGCGGTGACGGGCAGCGAGGACGATCGAGCCTTCG
TTTGGGAAACCTCCACCGGCGATGTCCTCTACGAGATCACGGAGCACAAG
GACACCGTCACGGAAACGCATTTCAGTCACGACGGCGTCTATTTGGCCAC
CGGTGATCTAGCCGGCGATCTGTTTGTCTTCAAGGTCAGTGAAAAGCACG
ACGAACGTCCGATCCTGACTAAAATCTGGGAGTACTCCATGAGCGACATG
TCCTGGCTCTTCTGGCATCGAGCTGCCCACATCCTGCTGGCGGGTAGTGA
CAGCGGAGAGGTCTTCGTTTTCCGCATACCCAGCGGTGAATGCAAAATCC
TGCCGGGACAATCTTCGCGTTGCGAGTCCGGAGAGCTCAGTGGGGATGGC
AAAAAGCTGTTCACGGCCTACGTGAACGGATCCGTAAAGCTGTGGGATCT
CAAGAGCTGTCAGGTGCTCATTGACGTAAACGAATCGCATCCAATGGGTT
TCGGCGAGATCACGCACGCGGTGGTGGCCTGCGAAAGGGAATCGCCCTTC
TACGTCTGCGCTGAGGCGTCCGGAAAAATGCTGGTCTGCA

BS04632.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-PA 1278 CG5114-RA 1..874 17..890 4320 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:26:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-RA 1440 CG5114-RA 101..974 17..890 4340 99.8 Plus
CG5114-RB 1500 CG5114-RB 101..957 17..873 4270 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 04:26:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14982935..14983791 17..873 4270 99.9 Plus
Blast to na_te.dros performed on 2015-02-04 04:26:08 has no hits.

BS04632.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:28 Download gff for BS04632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5114-PA 1..873 17..889 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:16:34 Download gff for BS04632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5114-PA 1..873 17..889 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:11:22 Download gff for BS04632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 95..973 7..889 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:51:56 Download gff for BS04632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 95..973 7..889 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:51:56 Download gff for BS04632.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14982929..14983799 7..882 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:11:22 Download gff for BS04632.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14976029..14976899 7..882 98   Plus

BS04632.complete Sequence

1310 bp (1310 high quality bases) assembled on 2006-02-02

> BS04632.complete
GAAGTTATCAGTCGACATGCGTGACAACACACCGCCACACCGGCCAGATT
TCGATGACGGCGACGACGAACTCCAGGAGATAATTGAGCTGGAGGAGCAG
CCGCTGGACGAAGATGACGACGATTTGGAGGAGGTGACGCTGGAGCAACT
GGAGGCCCGGCTTGCAATGGCCGGTGGCGATGATGATGAAGAGGAGGACG
AGGAGGAGCTACGTGACCGTGAGAGAATAGCAGCCATCACGGACGAAGCT
ACGGTCACTTTCAAGAAGCACACCGCTCCTGTTTTCGCCTGCAGTCTGCA
TCCCAACTACAATTGGGCGGTGACGGGCAGCGAGGACGATCGAGCCTTCG
TTTGGGAAACCTCCACCGGCGATGTCCTCTACGAGATCACGGAGCACAAG
GACACCGTCACGGAAACGCATTTCAGTCACGACGGCGTCTATTTGGCCAC
CGGTGATCTAGCCGGCGATCTGTTTGTCTTCAAGGTCAGTGAAAAGCACG
ACGAACGTCCGATCCTGACTAAAATCTGGGAGTACTCCATGAGCGACATG
TCCTGGCTCTTCTGGCATCGAGCTGCCCACATCCTGCTGGCGGGTAGTGA
CAGCGGAGAGGTCTTCGTTTTCCGCATACCCAGCGGTGAATGCAAAATCC
TGCCGGGACAATCTTCGCGTTGCGAGTCCGGAGAGCTCAGTGGGGATGGC
AAAAAGCTGTTCACGGCCTACGTGAACGGATCCGTAAAGCTGTGGGATCT
CAAGAGCTGTCAGGTGCTCATTGACGTAAACGAATCGCATCCAATGGGTT
TCGGCGAGATCACGCACGCGGTGGTGGCCTGCGAAAGGGAATCGCCCTTC
TACGTCTGCGCTGAGGCGTCCGGAAAAATGCTGTTCTGCACTAACAACGG
TCCGGTTAGCACAATCCAGTCGGAACACGGTATTGAGTGTCTGGCCTTTG
CTCCCTCCTCGGCGGATCTAAAGCTCTTTGCCTGTGGCTCGCTGGACGGC
AGGATATCCATCTGGGACTATGCCAAATCAGCGTTGCGTACCATATGCGA
AAATCCAGTTCCCAATGATGCTGTCATAAGGATCAAATGGTTGAACGACC
ACACGATACTTGCGGCCACCTCGCAGGGAAATCTGAACGCATTCGACGCA
CGCACAGGAATTCTGAAATTCACTCTGACGGGACACTACTATCACATCTA
CGAGTTTGTCTACAAGCCTCAGGAAAATCTATTGCTAACGGTATCCGAGG
ACAACACGGCCAAGATATTCAAGGTGCCGGCGCTGGGCGATTAGAAGCTT
TCTAGACCAT

BS04632.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:38:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-RA 1278 CG5114-PA 1..1278 17..1294 6345 99.8 Plus
CG5114-RB 1338 CG5114-PB 1..857 17..873 4270 99.9 Plus
CG5114-RB 1338 CG5114-PB 917..1338 873..1294 2080 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-RA 1440 CG5114-RA 101..1378 17..1294 6345 99.8 Plus
CG5114-RB 1500 CG5114-RB 101..957 17..873 4270 99.9 Plus
CG5114-RB 1500 CG5114-RB 1017..1438 873..1294 2080 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:38:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14982935..14983791 17..873 4270 99.9 Plus
3L 28110227 3L 14984209..14984424 1079..1294 1065 99.5 Plus
3L 28110227 3L 14983912..14984121 872..1081 1035 99.5 Plus
Blast to na_te.dros performed on 2014-11-27 23:38:26 has no hits.

BS04632.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:56:59 Download gff for BS04632.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 1..1278 17..1294 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:33:11 Download gff for BS04632.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 82..1375 7..1304 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:34:12 Download gff for BS04632.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 101..1378 17..1294 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:56:59 Download gff for BS04632.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 82..1375 7..1304 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:05:10 Download gff for BS04632.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 101..1378 17..1294 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:05:10 Download gff for BS04632.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14982935..14983790 17..872 99 -> Plus
3L 14983913..14984120 873..1080 99 -> Plus
3L 14984211..14984424 1081..1294 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:34:12 Download gff for BS04632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14976035..14976890 17..872 99 -> Plus
arm_3L 14977013..14977220 873..1080 99 -> Plus
arm_3L 14977311..14977524 1081..1294 99   Plus

BS04632.pep Sequence

Translation from 16 to 1293

> BS04632.pep
MRDNTPPHRPDFDDGDDELQEIIELEEQPLDEDDDDLEEVTLEQLEARLA
MAGGDDDEEEDEEELRDRERIAAITDEATVTFKKHTAPVFACSLHPNYNW
AVTGSEDDRAFVWETSTGDVLYEITEHKDTVTETHFSHDGVYLATGDLAG
DLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAHILLAGSDSGEVF
VFRIPSGECKILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQV
LIDVNESHPMGFGEITHAVVACERESPFYVCAEASGKMLFCTNNGPVSTI
QSEHGIECLAFAPSSADLKLFACGSLDGRISIWDYAKSALRTICENPVPN
DAVIRIKWLNDHTILAATSQGNLNAFDARTGILKFTLTGHYYHIYEFVYK
PQENLLLTVSEDNTAKIFKVPALGD*

BS04632.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-PA 425 CG5114-PA 1..425 1..425 2265 100 Plus
CG5114-PB 445 CG5114-PB 1..445 1..425 2234 95.5 Plus