Clone Sequence Records
BS04651.3prime Sequence
830 bp (829 high quality bases) assembled on 2005-12-02
> BS04651.3prime
ATGGTCTAGAAAGCTTCTATGTAGCCTTCGTCGCCTTCGCAGGCATTTGG
GCCTTGGCCGCCTTAAGCTGCTCCAAATTGAACTGTTTCCGGATTTCGGT
GGACACCTGGCGAATGACCGCATCCGTATTGGCCTTTAGATCCCGTTCCA
GCACATCAATGTCCACATCCTTGCTCTCCAATCGCATTTGCATGTCCGAA
TAGAAGTCACAAAACAACACCGGTTCATCTGAACCATTCGGCGTCCTCGT
GCTGCAGTATTGACCCCTTCGATGGAGATCATCGTTGTTGGTTTTGGCGT
CCAGGCCAAGCAGACGTCTCGCTCCCAATGGCAGCTGCTGTTGGATCAAT
CTCTCGTGATTCTGAGAGATGTGATGCTTCAGCTTCTTGAACTCCTTCAC
CTCGTTCTGCATGTACTTCACATAGCTATACATCTTGGAGGTTTTCTTCG
TTAGGTTCTCTAGGCAACTTATAAAGTTTCGCACCTGCTGTGTTCTCGGC
AATGTGCTGGGATCCAGTCGCTCGGCTTCGTCGAAGTGCTGCAGTGATCG
ATTAAAGTCGTGTTTCATGGCCAGTGCAGAGGCCAGGACCACATGATTCT
CGGCCACATTAGGAGCATGTTCCACCGCAGCGGTCAATATCAGATCGGCA
TCGGCCAGTCGACCCATTCGAAAGAGTATGGTACCCAGACTCAGCAGGGG
TATATCCTTAAAGATCGGCGGAGCCAGCAAGGCAGCCAATCTGGCACAGG
GCAGGGCTTCCCGGGCATTTCCTCGCATGCGCCAATAGTACGAGCTTANG
GTGTGGAACTTCCAGGAGGCCGGATGATGC
BS04651.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:52:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-PA | 1398 | CG11436-RA | 585..1398 | 830..17 | 4026 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1996 | CG11436-RA | 656..1469 | 830..17 | 4044 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:20:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4550410..4551223 | 17..830 | 4044 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:20:48 has no hits.
BS04651.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:57 Download gff for
BS04651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-PA | 585..1398 | 17..830 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:17:10 Download gff for
BS04651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-PA | 585..1398 | 17..830 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:03:49 Download gff for
BS04651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 656..1477 | 11..830 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:51:15 Download gff for
BS04651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 656..1477 | 11..830 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:51:15 Download gff for
BS04651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4550402..4551223 | 11..830 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:03:49 Download gff for
BS04651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4444435..4445256 | 11..830 | 99 | | Plus |
BS04651.5prime Sequence
902 bp (893 high quality bases) assembled on 2005-12-02
> BS04651.5prime
GAAGTTATCAGTCGACATGCGCCTGTGCCCGCTGGCGTTCGCCGTGCTGC
TTGGCCTTTTTCACCTGATCCAGGCCTGCAATCATTGGGTTCTTCGCGAG
GAGCAGATCGTGCCCAAACTGGACTCTCCATTCCACATGCGTGAACCCCA
CAATCTGGCGGCATTTCTCAAGCAGATCAGGTACAGTGAGTATGTGGAGC
GCTCCTATCTGGATCTGCTGCGCAAGCGGGAACAGATTGTGGAGCACCTA
CGATTTTCGATGCGTTTCGGTGAGGATCTGGCCGAGCAGGCCAAGTGCGC
CATGGACTACTACATGCTGGAGAAGCGAATGTCTTACCTGAAAATTACGC
CAGAGCAGTTGAAAAGGATTAATCTTCCGGACCAGAGGCAATTGCACATA
CAGAAGAGCGCATCCTCGATGGGAATGGAGCCGATATGCAGCGATTACCA
TCGATTAAGCGTGGGTCCAGCCACCTATGATCATCTGGAGAGTTTTCGGC
CCGAGGTCCTGGCCGCTGCCTTTCTGGAGCGCGAGCATGACACCAATGTG
GGCATGGCCACCGTGGAATTGACCCGGCGATTTGCGGTGGACGGATTGCA
GCATCATCCGGCCTCCTGGAAGTTCCACACCCTAAGCTCGTACTATTGGC
GCATGCGAGGAAATGCCCGGGAAGCCCTGCCCTGTGCCAGATTGGCTGCC
TTGCTGGCTCCGCCGATCTTTAAGGATATACCCCTGCTGAGTCTGGGTAC
CATACTCTTTCGAATGGGTCGACTGGCCGATGCCGATCTGATATTGACCG
CTGCGGTGGAACATGCTCCTAATGTGGCCGAGAATCATGTGGTCCTGGCC
TCTGCACTGGCCATGAAACACGACTTTAATCGATCACTGCAGCACTTCGA
CG
BS04651.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:52:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-PA | 1398 | CG11436-RA | 1..886 | 17..902 | 4430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:14:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1996 | CG11436-RA | 72..957 | 17..902 | 4430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4550922..4551807 | 902..17 | 4430 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:14:42 has no hits.
BS04651.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:53:58 Download gff for
BS04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-PA | 1..886 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:17:11 Download gff for
BS04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-PA | 1..886 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:30:48 Download gff for
BS04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..957 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:45:33 Download gff for
BS04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..957 | 17..902 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:45:33 Download gff for
BS04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4550922..4551807 | 17..902 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:30:48 Download gff for
BS04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4444955..4445840 | 17..902 | 100 | | Minus |
BS04651.complete Sequence
1430 bp assembled on 2009-02-12
> BS04651.complete
GAAGTTATCAGTCGACATGCGCCTGTGCCCGCTGGCGTTCGCCGTGCTGC
TTGGCCTTTTTCACCTGATCCAGGCCTGCAATCATTGGGTTCTTCGCGAG
GAGCAGATCGTGCCCAAACTGGACTCTCCATTCCACATGCGTGAACCCCA
CAATCTGGCGGCATTTCTCAAGCAGATCAGGTACAGTGAGTATGTGGAGC
GCTCCTATCTGGATCTGCTGCGCAAGCGGGAACAGATTGTGGAGCACCTA
CGATTTTCGATGCGTTTCGGTGAGGATCTGGCCGAGCAGGCCAAGTGCGC
CATGGACTACTACATGCTGGAGAAGCGAATGTCTTACCTGAAAATTACGC
CAGAGCAGTTGAAAAGGATTAATCTTCCGGACCAGAGGCAATTGCACATA
CAGAAGAGCGCATCCTCGATGGGAATGGAGCCGATATGCAGCGATTACCA
TCGATTAAGCGTGGGTCCAGCCACCTATGATCATCTGGAGAGTTTTCGGC
CCGAGGTCCTGGCCGCTGCCTTTCTGGAGCGCGAGCATGACACCAATGTG
GGCATGGCCACCGTGGAATTGACCCGGCGATTTGCGGTGGACGGATTGCA
GCATCATCCGGCCTCCTGGAAGTTCCACACCCTAAGCTCGTACTATTGGC
GCATGCGAGGAAATGCCCGGGAAGCCCTGCCCTGTGCCAGATTGGCTGCC
TTGCTGGCTCCGCCGATCTTTAAGGATATACCCCTGCTGAGTCTGGGTAC
CATACTCTTTCGAATGGGTCGACTGGCCGATGCCGATCTGATATTGACCG
CTGCGGTGGAACATGCTCCTAATGTGGCCGAGAATCATGTGGTCCTGGCC
TCTGCACTGGCCATGAAACACGACTTTAATCGATCACTGCAGCACTTCGA
CGAAGCCGAGCGACTGGATCCCAGCACATTGCCGAGAACACAGCAGGTGC
GAAACTTTATAAGTTGCCTAGAGAACCTAACGAAGAAAACCTCCAAGATG
TATAGCTATGTGAAGTACATGCAGAACGAGGTGAAGGAGTTCAAGAAGCT
GAAGCATCACATCTCTCAGAATCACGAGAGATTGATCCAACAGCAGCTGC
CATTGGGAGCGAGACGTCTGCTTGGCCTGGACGCCAAAACCAACAACGAT
GATCTCCATCGAAGGGGTCAATACTGCAGCACGAGGACGCCGAATGGTTC
AGATGAACCGGTGTTGTTTTGTGACTTCTATTCGGACATGCAAATGCGAT
TGGAGAGCAAGGATGTGGACATTGATGTGCTGGAACGGGATCTAAAGGCC
AATACGGATGCGGTCATTCGCCAGGTGTCCACCGAAATCCGGAAACAGTT
CAATTTGGAGCAGCTTAAGGCGGCCAAGGCCCAAATGCCTGCGAAGGCGA
CGAAGGCTACATAGAAGCTTTCTAGACCAT
BS04651.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:57:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1398 | CG11436-PA | 1..1398 | 17..1414 | 6975 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:57:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1996 | CG11436-RA | 72..1469 | 17..1414 | 6975 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:57:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4550410..4551807 | 1414..17 | 6975 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:57:26 has no hits.
BS04651.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:51 Download gff for
BS04651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 74..1471 | 17..1414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:08 Download gff for
BS04651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..1469 | 17..1414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:30:59 Download gff for
BS04651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..1469 | 17..1414 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:30:59 Download gff for
BS04651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4550410..4551807 | 17..1414 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:08 Download gff for
BS04651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4444443..4445840 | 17..1414 | 99 | | Minus |
BS04651.pep Sequence
Translation from 16 to 1413
> BS04651.pep
MRLCPLAFAVLLGLFHLIQACNHWVLREEQIVPKLDSPFHMREPHNLAAF
LKQIRYSEYVERSYLDLLRKREQIVEHLRFSMRFGEDLAEQAKCAMDYYM
LEKRMSYLKITPEQLKRINLPDQRQLHIQKSASSMGMEPICSDYHRLSVG
PATYDHLESFRPEVLAAAFLEREHDTNVGMATVELTRRFAVDGLQHHPAS
WKFHTLSSYYWRMRGNAREALPCARLAALLAPPIFKDIPLLSLGTILFRM
GRLADADLILTAAVEHAPNVAENHVVLASALAMKHDFNRSLQHFDEAERL
DPSTLPRTQQVRNFISCLENLTKKTSKMYSYVKYMQNEVKEFKKLKHHIS
QNHERLIQQQLPLGARRLLGLDAKTNNDDLHRRGQYCSTRTPNGSDEPVL
FCDFYSDMQMRLESKDVDIDVLERDLKANTDAVIRQVSTEIRKQFNLEQL
KAAKAQMPAKATKAT*
BS04651.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:59:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-PA | 465 | CG11436-PA | 1..465 | 1..465 | 2414 | 100 | Plus |
