Clone Sequence Records
BS04658.3prime Sequence
953 bp (810 high quality bases) assembled on 2005-12-02
> BS04658.3prime
ATGGTCTAGAAAGCTTTTAATAACCCTTGAAGTACTTAAGCCTAAAGAGC
GGCACCTGTTTGCCCTTAGTGGCAAAGGCCAGGAAGCTGCTGTGCGGCGA
AAAGGCCATGGAGGTCACAAAGCCAACCTTCTCGTTCTGTGCCGGGAAAT
TGGAGTACACAGTGGCGCTGGGGAAATGGGCCAGCTTAAAAGCATTCGGC
GCCTCACTGGAGCACATCGCCAGTAGCTCAGATGAGTGATTGAACTGGAG
ATCCGTGATGGCAGTCCGTAGGTTCATGAAGCGCTTCTCGGGTTGTGGGG
CCTTGGATGCGAAAATGCTCTCGTAGTCGTAGATGTTGACCACGCCCTCT
TGACTGCCGGTGGCCAGTAGGCGTTGGTTGGGAGACAGTTGAATGGACTC
TCCATGTATACAGCCGTCGTCCATGAAGATGTGCTCGATGAGGTTCTGGC
GCAGGTTCAGCACGCTGACATTGGAAGTGGAACCGCAGACGAGGATCCTC
TTGGAGTCACTAGACCATGTGAATCCCTTCACTTTGCCCTCCTGCTTGAA
GCTGTGCAGCAGCTCATTTGTTTTGGCCGTGAGCAGGTGAATGGCTCCAA
ACTTGCCAGCAGTGACGATAAATTTGCCACATGGAGACACCTCAAAGCGG
TGCATAAATTCCATTGCGCCCGGCAGCTTTAGCTTCGATTCCTTGGCTTC
CAGCAAGTCGTAGGAGTAGTAGAATGGTTTCACAGAACCAAAGAACGCCC
TTGTGCCGCATGGAGCAATTCTGGAGCACGCCAGCGGGAACTTCTTGAAG
CGCATGTTGTGCAACCTTTCGTTCTTTTGCCCATCCACGGCGTAGATGGT
GGCTAGGCCATTCATGCCCGCCACTAGAGCAGCAGTACTGGTTGGATGAA
ACTGAATGCTGGTGGCATACCCCTCGGCATATGTGGCCCTGTTCAGGTCT
TTG
BS04658.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:52:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7989-PA | 1521 | l(2)k07824-RA | 585..1521 | 953..17 | 4635 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wcd-RA | 1663 | CG7989-RA | 690..1626 | 953..17 | 4655 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16345875..16346811 | 17..953 | 4655 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:07:35 has no hits.
BS04658.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:54:09 Download gff for
BS04658.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7989-PA | 585..1521 | 17..953 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:17:26 Download gff for
BS04658.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7989-PA | 585..1521 | 17..953 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:44:13 Download gff for
BS04658.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 690..1626 | 17..953 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:38:23 Download gff for
BS04658.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 690..1626 | 17..953 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:38:23 Download gff for
BS04658.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16345875..16346811 | 17..953 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:44:13 Download gff for
BS04658.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12233380..12234316 | 17..953 | 99 | | Plus |
BS04658.5prime Sequence
870 bp (859 high quality bases) assembled on 2005-11-29
> BS04658.5prime
GAAGTTATCAGTCGACATGAGTTCAGACGAGTCCAGCGACGGTTTGGAGG
AGCTGCAGAGTCTGAAGGCCCTCTACGGCCAGCAGGAGCAAGAGAAACCG
GCAAAGATCAAAAGGGAACGTTATATTCCAAAGGCCTCGCAGGCCAAGGA
GCTCAACTATGTGGAGGTGCCCATGGAAAAGGTGCTCTTCGGCGACAGGC
AGCGACTGCTCACCAATCTAGCCAAGTCCGTGGGACAAAAGTTGCCGAAC
GATGACGAAGACGAGCAGGAGGAAAATCCCGGCCAGGCAAAGCCAGGCGA
CAAGCGGAAAGCCGCCTGGTCGGATTCCGATGACGAGGACCTGCAGGTGG
GCGATGTCAAGAAGGCCACAAAGCACACGGGTCCACTGAACCACCTGCGC
AAGGATAAATCGTACAAGGAGTATCTTACGGCGCGATTCCAGCGCACGCT
TAACCAACCCAAGTGGGCGGAAAAGAAGGTCAAAAATGAGGACGACGAGG
ACGTATCCTCCGACGAAGAACTGCTGCGGACGGTTGGCTTTATCGATCGT
AAAGCCCGGAACAGTGATCTGCCCCAGAAGACTCTGAATTTTAAACGGGT
CAAAGACCTGAACAGGGCCACATATGCCGAGGGTAATGCCACCAGCATTC
AGTTTCATCCAACCAGTACTGCTGCTCTAGTGGCGGGCATGAATGGCCTA
GCCACCATCTACGCCGTGGATGGGCAAAAGAACGAAAGGTTGCACAACAT
GCGCTTCAAGAAGTTCCCGCTGGCGTGCTCCAGAATTGCTCCATGCGGCA
CAAGGGCGTTCTTTGGTTCTGTGAAACCATTCTACTACTCCTACGACTTG
CTGGAAGCCAAGGAATCGAA
BS04658.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7989-PA | 1521 | l(2)k07824-RA | 1..854 | 17..870 | 4270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:18:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wcd-RA | 1663 | CG7989-RA | 106..959 | 17..870 | 4270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:18:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16346542..16347395 | 870..17 | 4270 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:18:26 has no hits.
BS04658.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:54:11 Download gff for
BS04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7989-PA | 1..852 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:17:28 Download gff for
BS04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7989-PA | 1..852 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:18:55 Download gff for
BS04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 102..959 | 9..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:29:37 Download gff for
BS04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 102..959 | 9..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:29:37 Download gff for
BS04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16346542..16347399 | 9..870 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:18:55 Download gff for
BS04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12234047..12234904 | 9..870 | 99 | | Minus |
BS04658.complete Sequence
1553 bp (1553 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ634993
> BS04658.complete
GAAGTTATCAGTCGACATGAGTTCAGACGAGTCCAGCGACGGTTTGGAGG
AGCTGCAGAGTCTGAAGGCCCTCTACGGCCAGCAGGAGCAAGAGAAACCG
GCAAAGATCAAAAGGGAACGTTATATTCCAAAGGCCTCGCAGGCCAAGGA
GCTCAACTATGTGGAGGTGCCCATGGAAAAGGTGCTCTTCGGCGACAGGC
AGCGACTGCTCACCAATCTAGCCAAGTCCGTGGGACAAAAGTTGCCGAAC
GATGACGAAGACGAGCAGGAGGAAAATCCCGGCCAGGCAAAGCCAGGCGA
CAAGCGGAAAGCCGCCTGGTCGGATTCCGATGACGAGGACCTGCAGGTGG
GCGATGTCAAGAAGGCCACAAAGCACACGGGTCCACTGAACCACCTGCGC
AAGGATAAATCGTACAAGGAGTATCTTACGGCGCGATTCCAGCGCACGCT
TAACCAACCCAAGTGGGCGGAAAAGAAGGTCAAAAATGAGGACGACGAGG
ACGTATCCTCCGACGAAGAACTGCTGCGGACGGTTGGCTTTATCGATCGT
AAAGCCCGGAACAGTGATCTGCCCCAGAAGACTCTGAATTTTAAACGGGT
CAAAGACCTGAACAGGGCCACATATGCCGAGGGTAATGCCACCAGCATTC
AGTTTCATCCAACCAGTACTGCTGCTCTAGTGGCGGGCATGAATGGCCTA
GCCACCATCTACGCCGTGGATGGGCAAAAGAACGAAAGGTTGCACAACAT
GCGCTTCAAGAAGTTCCCGCTGGCGTGCTCCAGAATTGCTCCATGCGGCA
CAAGGGCGTTCTTTGGTTCTGTGAAACCATTCTACTACTCCTACGACTTG
CTGGAAGCCAAGGAATCGAAGCTAAAGCTGCCGGGCGCAATGGAATTTAT
GCACCGCTTTGAGGTGTCTCCATGTGGCAAATTTATCGTCACTGCTGGCA
AGTTTGGAGCCATTCACCTGCTCACGGCCAAAACAAATGAGCTGCTGCAC
AGCTTCAAGCAGGAGGGCAAAGTGAAGGGATTCACATGGTCTAGTGACTC
CAAGAGGATCCTCGTCTGCGGTTCCACTTCCAATGTCAGCGTGCTGAACC
TGCGCCAGAACCTCATCGAGCACATCTTCATGGACGACGGCTGTATACAT
GGAGAGTCCATTCAACTGTCTCCCAACCAACGCCTACTGGCCACCGGCAG
TCAAGAGGGCGTGGTCAACATCTACGACTACGAGAGCATTTTCGCATCCA
AGGCCCCACAACCCGAGAAGCGCTTCATGAACCTACGGACTGCCATCACG
GATCTCCAGTTCAATCACTCATCTGAGCTACTGGCGATGTGCTCCAGTGA
GGCGCCGAATGCTTTTAAGCTGGCCCATTTCCCCAGCGCCACTGTGTACT
CCAATTTCCCGGCACAGAACGAGAAGGTTGGCTTTGTGACCTCCATGGCC
TTTTCGCCGCACAGCAGCTTCCTGGCCTTTGCCACTAAGGGCAAACAGGT
GCCGCTCTTTAGGCTTAAGTACTTCAAGGGTTATTAAAAGCTTTCTAGAC
CAT
BS04658.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:37:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wcd-RA | 1521 | CG7989-PA | 1..1521 | 17..1537 | 7605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wcd-RA | 1663 | CG7989-RA | 106..1626 | 17..1537 | 7605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:37:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16345875..16347395 | 1537..17 | 7605 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:37:22 has no hits.
BS04658.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:56:41 Download gff for
BS04658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k07824-RA | 1..1521 | 17..1537 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:32:50 Download gff for
BS04658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k07824-RA | 100..1624 | 9..1537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:05:28 Download gff for
BS04658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 106..1624 | 17..1535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:56:41 Download gff for
BS04658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k07824-RA | 100..1624 | 9..1537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:23:24 Download gff for
BS04658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 106..1624 | 17..1535 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:23:24 Download gff for
BS04658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16345877..16347395 | 17..1535 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:05:28 Download gff for
BS04658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12233382..12234900 | 17..1535 | 100 | | Minus |
BS04658.pep Sequence
Translation from 16 to 1536
> BS04658.pep
MSSDESSDGLEELQSLKALYGQQEQEKPAKIKRERYIPKASQAKELNYVE
VPMEKVLFGDRQRLLTNLAKSVGQKLPNDDEDEQEENPGQAKPGDKRKAA
WSDSDDEDLQVGDVKKATKHTGPLNHLRKDKSYKEYLTARFQRTLNQPKW
AEKKVKNEDDEDVSSDEELLRTVGFIDRKARNSDLPQKTLNFKRVKDLNR
ATYAEGNATSIQFHPTSTAALVAGMNGLATIYAVDGQKNERLHNMRFKKF
PLACSRIAPCGTRAFFGSVKPFYYSYDLLEAKESKLKLPGAMEFMHRFEV
SPCGKFIVTAGKFGAIHLLTAKTNELLHSFKQEGKVKGFTWSSDSKRILV
CGSTSNVSVLNLRQNLIEHIFMDDGCIHGESIQLSPNQRLLATGSQEGVV
NIYDYESIFASKAPQPEKRFMNLRTAITDLQFNHSSELLAMCSSEAPNAF
KLAHFPSATVYSNFPAQNEKVGFVTSMAFSPHSSFLAFATKGKQVPLFRL
KYFKGY*
BS04658.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wcd-PA | 506 | CG7989-PA | 1..506 | 1..506 | 2623 | 100 | Plus |
