Clone Sequence Records
BS04682.3prime Sequence
915 bp (816 high quality bases) assembled on 2005-12-02
> BS04682.3prime
ATGGTCTAGAAAGCTTCTAACTACTCATTTGGCTAAGCTGTTGGACTTTT
AAGTAAATTCCGTTGGCGGGGCACAGCAGAATGTTGGACTTGAGAAACTC
AATTTTTGGGTCAGTTCGCGGACAGACGCTGAAGTGAAAGTTTCGGAGCA
GACTGACCAGGCCAATGGTCGTCTGCATTTTGCCAAACCTCATTCCAATG
CAATTTCGCGGTCCATCGCCAAAGGGCAGCCATGCGGCGGTGGGTCGCTG
CGCCAGTTGATCGGCCAGAAAGCGCTCCGGGATGAACTTATGTGGCTCGG
GATATAGGGCGGGATCATGATGGATGCCGTAGACCGGTATCAGTAGCATT
TGACCCGGCTCGATGTAGAAATGACGATCGCCCTTGGCTGCGTAGAGATG
CCTGGAGATCCGAGTGAGCTGCGGTAGTATGGGATACTTCCGAAGGGTTT
CTGCTATGACCAGTTCCATGTACCGCAGCTCCTGCATGGAATCATATGTG
AATTCACCGTTGTGTAACCGCAGAGCCTGGTCGATTTCCTCGCGTAGCTT
TGCCTGCAGTGCCGGCTGCTTGGCCAACTCGTACAGGGCAAATCCTAGCG
TTGATGCGGATGTGTCGAATCCCGCCGCAAAGAATATAAATGCCTGGGCG
GCCATTTCCTCGATGGTGAGCTCACCGCGCTGCTTCATTTCGATCAGCAG
GTTCATGAAGTCGCTCCTCACGATGCCCTGCTCCTCCCTCTGCTTCACAG
TTTCCCGAACGATGCCCACATAGAAATCCGTAATGTCTTGATGGATTTGG
CGCATGCGCAGAAACCTGGCCACTTCGGGGAAACTCTCTATAAATCCATC
GACCAGCTTGCAGTGGCGACGCTCTGAAAAGGCTCTCCTGCCCATTATGG
CGAACTCCGCCTCGG
BS04682.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:52:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10240-PA | 1500 | Cyp6a22-RA | 602..1500 | 915..17 | 4495 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 15:46:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a22-RC | 1951 | CG10240-RC | 717..1615 | 915..17 | 4495 | 100 | Minus |
| Cyp6a22-RB | 1925 | CG10240-RB | 931..1829 | 915..17 | 4495 | 100 | Minus |
| Cyp6a22-RA | 1711 | CG10240-RA | 717..1615 | 915..17 | 4495 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 15:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14872404..14872868 | 915..451 | 2325 | 100 | Minus |
| 2R | 25286936 | 2R | 14872934..14873369 | 452..17 | 2180 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 15:46:33 has no hits.
BS04682.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:54:52 Download gff for
BS04682.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10240-PA | 602..1500 | 17..915 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:18:19 Download gff for
BS04682.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10240-PA | 602..1500 | 17..915 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:17:12 Download gff for
BS04682.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 717..1622 | 8..915 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:45:12 Download gff for
BS04682.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 717..1622 | 8..915 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:45:12 Download gff for
BS04682.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14872404..14872868 | 451..915 | 100 | -> | Minus |
| 2R | 14872936..14873376 | 8..450 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:17:12 Download gff for
BS04682.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10759909..10760373 | 451..915 | 100 | -> | Minus |
| arm_2R | 10760441..10760881 | 8..450 | 99 | | Minus |
BS04682.5prime Sequence
930 bp (790 high quality bases) assembled on 2005-11-29
> BS04682.5prime
GAAGTTATCAGTCGACATGCTGGATGTAGTGGCTCTACTGCTTATTGCCC
TGGCAGTGGGCTTCTGGTTCGTGCGGACGAGATATAGCTACTGGACCCGG
CGGGGCATTGGCAGTGAGCCGGCCCGGTTTCCCGTGGGGAATATGGAGGG
ATTTCGGAAAAACAAACATTTCATCGACATTGTAACGCCAATCTATGAGA
AGTTCAAGGGCAATGGAGCACCCTTTGCCGGATTTTTTATGATGTTGAGA
CCTGTGGTCTTGGTCACAGATCTGGAACTGGCCAAACAGATCCTCATACA
GGACTTCGCCAACTTTGAGGATCGGGGAATGTATCACAATGAGCGGGATG
ATCCTCTAACTGGGCATCTATTCCGCATTGACGGGCCCAAGTGGCGACCC
TTGCGCCAGAAAATGTCCCCCACCTTTACCTCAGCTAAGATGAAGTATAT
GTTTCCGACGGTCTGCGAGGTGGGCGAGGAACTTACTCAAGTTTGTGGCG
AGTTGGCGGATAATGCCATGTGTGGAATCCTCGAGATCGGTGATCTGATG
GCTCGCTACACTTCGGACGTGATAGGACGGTGTGCCTTTGGCGTGGAATG
CAACGGCCTCCGGAATCCCGAGGCGGAGTTCGCCATAATGGGCAGGAGAG
CCTTTTCAGAGCGTCGCCACTGCAAGCTGGTCGATGGATTTATAGAGAGT
TTCCCCGAAGTGGCCAGGTTTCTGCGCATGCGCCAAATCCATCAAGACAT
TACGGATTTCTATGTGGGCATCGTTCGGGAAACTGTGAAGCAGAGGGAGG
AGCAGGGCATCGTGAGGAGCGACTTCATGAACCTGCTGATCGAAATGAAG
CAGCGCGGTGAGCTCACCATCGAGGAAATGGCCGCCCAGGCATTTATATT
CTTTGCGGCGGGATTCGACACATCCGCATC
BS04682.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:52:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10240-PA | 1500 | Cyp6a22-RA | 1..914 | 17..930 | 4570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:43:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a22-RC | 1951 | CG10240-RC | 116..1029 | 17..930 | 4570 | 100 | Plus |
| Cyp6a22-RB | 1925 | CG10240-RB | 330..1243 | 17..930 | 4570 | 100 | Plus |
| Cyp6a22-RA | 1711 | CG10240-RA | 116..1029 | 17..930 | 4570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:43:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14871803..14872716 | 17..930 | 4570 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:43:15 has no hits.
BS04682.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:54:53 Download gff for
BS04682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10240-PA | 1..914 | 17..930 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:18:21 Download gff for
BS04682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10240-PA | 1..914 | 17..930 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 11:00:36 Download gff for
BS04682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 111..1029 | 10..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:15:49 Download gff for
BS04682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 111..1029 | 10..930 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:15:49 Download gff for
BS04682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14871798..14872716 | 10..930 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 11:00:36 Download gff for
BS04682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10759303..10760221 | 10..930 | 99 | | Plus |
BS04682.complete Sequence
1532 bp (1532 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635005
> BS04682.complete
GAAGTTATCAGTCGACATGCTGGATGTAGTGGCTCTACTGCTTATTGCCC
TGGCAGTGGGCTTCTGGTTCGTGCGGACGAGATATAGCTACTGGACCCGG
CGGGGCATTGGCAGTGAGCCGGCCCGGTTTCCCGTGGGGAATATGGAGGG
ATTTCGGAAAAACAAACATTTCATCGACATTGTAACGCCAATCTATGAGA
AGTTCAAGGGCAATGGAGCACCCTTTGCCGGATTTTTTATGATGTTGAGA
CCTGTGGTCTTGGTCACAGATCTGGAACTGGCCAAACAGATCCTCATACA
GGACTTCGCCAACTTTGAGGATCGGGGAATGTATCACAATGAGCGGGATG
ATCCTCTAACTGGGCATCTATTCCGCATTGACGGGCCCAAGTGGCGACCC
TTGCGCCAGAAAATGTCCCCCACCTTTACCTCAGCTAAGATGAAGTATAT
GTTTCCGACGGTCTGCGAGGTGGGCGAGGAACTTACTCAAGTTTGTGGCG
AGTTGGCGGATAATGCCATGTGTGGAATCCTCGAGATCGGTGATCTGATG
GCTCGCTACACTTCGGACGTGATAGGACGGTGTGCCTTTGGCGTGGAATG
CAACGGCCTCCGGAATCCCGAGGCGGAGTTCGCCATAATGGGCAGGAGAG
CCTTTTCAGAGCGTCGCCACTGCAAGCTGGTCGATGGATTTATAGAGAGT
TTCCCCGAAGTGGCCAGGTTTCTGCGCATGCGCCAAATCCATCAAGACAT
TACGGATTTCTATGTGGGCATCGTTCGGGAAACTGTGAAGCAGAGGGAGG
AGCAGGGCATCGTGAGGAGCGACTTCATGAACCTGCTGATCGAAATGAAG
CAGCGCGGTGAGCTCACCATCGAGGAAATGGCCGCCCAGGCATTTATATT
CTTTGCGGCGGGATTCGACACATCCGCATCAACGCTAGGATTTGCCCTGT
ACGAGTTGGCCAAGCAGCCGGCACTGCAGGCAAAGCTACGCGAGGAAATC
GACCAGGCTCTGCGGTTACACAACGGTGAATTCACATATGATTCCATGCA
GGAGCTGCGGTACATGGAACTGGTCATAGCAGAAACCCTTCGGAAGTATC
CCATACTACCGCAGCTCACTCGGATCTCCAGGCATCTCTACGCAGCCAAG
GGCGATCGTCATTTCTACATCGAGCCGGGTCAAATGCTACTGATACCGGT
CTACGGCATCCATCATGATCCCGCCCTATATCCCGAGCCACATAAGTTCA
TCCCGGAGCGCTTTCTGGCCGATCAACTGGCGCAGCGACCCACCGCCGCA
TGGCTGCCCTTTGGCGATGGACCGCGAAATTGCATTGGAATGAGGTTTGG
CAAAATGCAGACGACCATTGGCCTGGTCAGTCTGCTCCGAAACTTTCACT
TCAGCGTCTGTCCGCGAACTGACCCAAAAATTGAGTTTCTCAAGTCCAAC
ATTCTGCTGTGCCCCGCCAACGGAATTTACTTAAAAGTCCAACAGCTTAG
CCAAATGAGTAGTTAGAAGCTTTCTAGACCAT
BS04682.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:35:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a22-RC | 1500 | CG10240-PC | 1..1500 | 17..1516 | 7500 | 100 | Plus |
| Cyp6a22-RB | 1500 | CG10240-PB | 1..1500 | 17..1516 | 7500 | 100 | Plus |
| Cyp6a22-RA | 1500 | CG10240-PA | 1..1500 | 17..1516 | 7500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:35:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a22-RC | 1951 | CG10240-RC | 116..1615 | 17..1516 | 7500 | 100 | Plus |
| Cyp6a22-RB | 1925 | CG10240-RB | 330..1829 | 17..1516 | 7500 | 100 | Plus |
| Cyp6a22-RA | 1711 | CG10240-RA | 116..1615 | 17..1516 | 7500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:35:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14871803..14872868 | 17..1082 | 5330 | 100 | Plus |
| 2R | 25286936 | 2R | 14872934..14873369 | 1081..1516 | 2180 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:35:57 has no hits.
BS04682.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:56:38 Download gff for
BS04682.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 1..1500 | 17..1516 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:32:47 Download gff for
BS04682.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 107..1618 | 10..1525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:40 Download gff for
BS04682.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 116..1615 | 17..1516 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:56:38 Download gff for
BS04682.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 107..1618 | 10..1525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:22:56 Download gff for
BS04682.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 116..1615 | 17..1516 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:22:56 Download gff for
BS04682.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14871803..14872868 | 17..1082 | 100 | -> | Plus |
| 2R | 14872936..14873369 | 1083..1516 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:40 Download gff for
BS04682.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10760441..10760874 | 1083..1516 | 100 | | Plus |
| arm_2R | 10759308..10760373 | 17..1082 | 100 | -> | Plus |
BS04682.pep Sequence
Translation from 16 to 1515
> BS04682.pep
MLDVVALLLIALAVGFWFVRTRYSYWTRRGIGSEPARFPVGNMEGFRKNK
HFIDIVTPIYEKFKGNGAPFAGFFMMLRPVVLVTDLELAKQILIQDFANF
EDRGMYHNERDDPLTGHLFRIDGPKWRPLRQKMSPTFTSAKMKYMFPTVC
EVGEELTQVCGELADNAMCGILEIGDLMARYTSDVIGRCAFGVECNGLRN
PEAEFAIMGRRAFSERRHCKLVDGFIESFPEVARFLRMRQIHQDITDFYV
GIVRETVKQREEQGIVRSDFMNLLIEMKQRGELTIEEMAAQAFIFFAAGF
DTSASTLGFALYELAKQPALQAKLREEIDQALRLHNGEFTYDSMQELRYM
ELVIAETLRKYPILPQLTRISRHLYAAKGDRHFYIEPGQMLLIPVYGIHH
DPALYPEPHKFIPERFLADQLAQRPTAAWLPFGDGPRNCIGMRFGKMQTT
IGLVSLLRNFHFSVCPRTDPKIEFLKSNILLCPANGIYLKVQQLSQMSS*
BS04682.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a22-PC | 499 | CG10240-PC | 1..499 | 1..499 | 2622 | 100 | Plus |
| Cyp6a22-PB | 499 | CG10240-PB | 1..499 | 1..499 | 2622 | 100 | Plus |
| Cyp6a22-PA | 499 | CG10240-PA | 1..499 | 1..499 | 2622 | 100 | Plus |
| Cyp6a18-PB | 507 | CG13977-PB | 10..507 | 5..494 | 1226 | 48.5 | Plus |
| Cyp6a18-PA | 507 | CG13977-PA | 10..507 | 5..494 | 1226 | 48.5 | Plus |
