Clone Sequence Records
BS04684.3prime Sequence
932 bp (819 high quality bases) assembled on 2005-12-02
> BS04684.3prime
ATGGTCTAGAAAGCTTTTAAATGCGCAAATGGAAATTATGGCCATTGACG
ACGCACGATCGGCCCGGGACGCTGTACGTGGGCAGCGGCGAATGCACAAA
CTTTGGCACCCTCTGGTTGGTTGCCATGTAGCCGACACAGAACGACTGCG
TCGTGTGGCTCCACATCACCTCGCCGCTGCTCTGGCCCGGATAATAGAGT
AGCGTCAGAGCTCCAGCGTACAGATCCTGCTGTCGGGGCAGCAGCGGGGA
GTCCAGGAACTTTTGCTTGAACGTCTTGTGAAGACTGGTCACCGCACAAT
CACTGCTAAATGCCCCATGGCAGATCTCTCGGGCCAGCAGCGTTTTCATC
AGGTACTCGCCGTTTCCGGTTGTGCAGGTGGCTATGGCCAGTTCGTCCGT
ATCGGTGGCCCAACAGCCGGCACCATAAGTAGCCGCCTGCCCCACTCTGC
CCGGAACTTTGAGCAGTATGCCACCGGAGCTACATCCAGCTGCTGTGTTC
CCTGCCCCATCAACACATACCGCTCCCACTGTGTCCAAAGCAGCGGCAAG
TTCCACCTCGTTTCCTGGTTCCGGCACTTGTACGGATTCCTCGGACGTTG
CCTTGCCCAATCTGCTGTTGACCACGAGGTCGTACTTGCTTTTGTAGTGA
TTAAACTGGAACTTGGCCTTAGATGAGATCAGTACGCCGGGCTCCACCAT
GGAGCAACCCACCTCGTCGGCATAGTGTTCCGCTCCAGTGCCGGCGAGGA
TCATCGGTGGAATGCGCTCCAGAAGCTGCGGACTGGACTGGGCATCGCAG
ATGCGTCTCGCCAACTGTATGGGGTTCTTCACCCGACTAACGTTCGTGCA
GGCGCCAAAGTTAAGCGTTGAGCCATCCATTATAGCCGCATCGCACTGCA
CAGAGCCGTCCATGCAGAGATTGGAGCCATAG
BS04684.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:52:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5241-PA | 1098 | CG5241-RA | 183..1098 | 932..17 | 4580 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taspase1-RB | 2159 | CG5241-RB | 268..1184 | 932..16 | 4585 | 100 | Minus |
| Taspase1-RA | 1503 | CG5241-RA | 268..1184 | 932..16 | 4585 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16086351..16087182 | 101..932 | 4160 | 100 | Plus |
| 3L | 28110227 | 3L | 16086196..16086282 | 16..102 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:25:24 has no hits.
BS04684.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:54:56 Download gff for
BS04684.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5241-PA | 183..1098 | 17..932 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:18:25 Download gff for
BS04684.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5241-PA | 183..1098 | 17..932 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:00:28 Download gff for
BS04684.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 268..1184 | 16..932 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:49:43 Download gff for
BS04684.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 268..1184 | 16..932 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:49:43 Download gff for
BS04684.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16086196..16086280 | 16..100 | 100 | <- | Plus |
| 3L | 16086351..16087182 | 101..932 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:00:28 Download gff for
BS04684.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16079296..16079380 | 16..100 | 100 | <- | Plus |
| arm_3L | 16079451..16080282 | 101..932 | 100 | | Plus |
BS04684.5prime Sequence
934 bp (781 high quality bases) assembled on 2005-11-29
> BS04684.5prime
GAAGTTATCAGTCGACATGGCCGGCTTCGTCGCGGTGCACACGGGGGCTG
GGAACTGCATCGACGAGACGAAGTACCAGCGGGTGATTAAGGAGGCCTGC
CTGCGCGCCACGGAGATCCTTCGCAACGGCGGATCCGCCGTCGATGCCTG
CGAGGCGGCCATTGTGCGGCTGGAGAACTGCGGCTACACAAACGCCGGCT
ATGGCTCCAATCTCTGCATGGACGGCTCTGTGCAGTGCGATGCGGCTATA
ATGGATGGCTCAACGCTTAACTTTGGCGCCTGCACGAACGTTAGTCGGGT
GAAGAACCCCATACAGTTGGCGAGACGCATCTGCGATGCCCAGTCCAGTC
CGCAGCTTCTGGAGCGCATTCCACCGATGATCCTCGCCGGCACTGGAGCG
GAACACTATGCCGACGAGGTGGGTTGCTCCATGGTGGAGCCCGGCGTACT
GATCTCATCTAAGGCCAAGTTCCAGTTTAATCACTACAAAAGCAAGTACG
ACCTCGTGGTCAACAGCAGATTGGGCAAGGCAACGTCCGAGGAATCCGTA
CAAGTGCCGGAACCAGGAAACGAGGTGGAACTTGCCGCTGCTTTGGACAC
AGTGGGAGCGGTATGTGTTGATGGGGCAGGGAACACAGCAGCTGGATGTA
GCTCCGGTGGCATACTGCTCAAAGTTCCGGGCAGAGTGGGGCAGGCGGCT
ACTTATGGTGCCGGCTGTTGGGCCACCGATACGGACGAACTGGCCATAGC
CACCTGCACAACCGGAAACGGCGAGTACCTGATGAAAACGCTGCTGGCCC
GAGAGATCTGCCATGGGGCATTTAGCAGTGATTGTGCGGTGACCAGTCTT
CACAAGACGTTCAAGCAAAAGTTCCTGGGACTCCCGCTGCTGCCCCGACA
GCAGGATCTGTACGCTGGAGCTCTGACGCTACTC
BS04684.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:52:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5241-PA | 1098 | CG5241-RA | 1..862 | 17..878 | 4310 | 100 | Plus |
| CG5241-PA | 1098 | CG5241-RA | 867..918 | 883..934 | 260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:26:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taspase1-RB | 2159 | CG5241-RB | 84..1003 | 15..934 | 4555 | 99.8 | Plus |
| Taspase1-RA | 1503 | CG5241-RA | 84..1003 | 15..934 | 4555 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 04:25:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16086447..16087337 | 934..44 | 4395 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-04 04:25:59 has no hits.
BS04684.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:54:57 Download gff for
BS04684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5241-PA | 1..918 | 17..934 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:18:26 Download gff for
BS04684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5241-PA | 1..918 | 17..934 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:11:20 Download gff for
BS04684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 78..1003 | 7..934 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:51:54 Download gff for
BS04684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 78..1003 | 7..934 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:51:54 Download gff for
BS04684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16086447..16087336 | 45..934 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:11:20 Download gff for
BS04684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16079547..16080436 | 45..934 | 99 | <- | Minus |
BS04684.complete Sequence
1130 bp (1130 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635006
> BS04684.complete
GAAGTTATCAGTCGACATGGCCGGCTTCGTCGCGGTGCACACGGGGGCTG
GGAACTGCATCGACGAGACGAAGTACCAGCGGGTGATTAAGGAGGCCTGC
CTGCGCGCCACGGAGATCCTTCGCAACGGCGGATCCGCCGTCGATGCCTG
CGAGGCGGCCATTGTGCGGCTGGAGAACTGCGGCTACACAAACGCCGGCT
ATGGCTCCAATCTCTGCATGGACGGCTCTGTGCAGTGCGATGCGGCTATA
ATGGATGGCTCAACGCTTAACTTTGGCGCCTGCACGAACGTTAGTCGGGT
GAAGAACCCCATACAGTTGGCGAGACGCATCTGCGATGCCCAGTCCAGTC
CGCAGCTTCTGGAGCGCATTCCACCGATGATCCTCGCCGGCACTGGAGCG
GAACACTATGCCGACGAGGTGGGTTGCTCCATGGTGGAGCCCGGCGTACT
GATCTCATCTAAGGCCAAGTTCCAGTTTAATCACTACAAAAGCAAGTACG
ACCTCGTGGTCAACAGCAGATTGGGCAAGGCAACGTCCGAGGAATCCGTA
CAAGTGCCGGAACCAGGAAACGAGGTGGAACTTGCCGCTGCTTTGGACAC
AGTGGGAGCGGTATGTGTTGATGGGGCAGGGAACACAGCAGCTGGATGTA
GCTCCGGTGGCATACTGCTCAAAGTTCCGGGCAGAGTGGGGCAGGCGGCT
ACTTATGGTGCCGGCTGTTGGGCCACCGATACGGACGAACTGGCCATAGC
CACCTGCACAACCGGAAACGGCGAGTACCTGATGAAAACGCTGCTGGCCC
GAGAGATCTGCCATGGGGCATTTAGCAGTGATTGTGCGGTGACCAGTCTT
CACAAGACGTTCAAGCAAAAGTTCCTGGACTCCCCGCTGCTGCCCCGACA
GCAGGATCTGTACGCTGGAGCTCTGACGCTACTCTATTATCCGGGCCAGA
GCAGCGGCGAGGTGATGTGGAGCCACACGACGCAGTCGTTCTGTGTCGGC
TACATGGCAACCAACCAGAGGGTGCCAAAGTTTGTGCATTCGCCGCTGCC
CACGTACAGCGTCCCGGGCCGATCGTGCGTCGTCAATGGCCATAATTTCC
ATTTGCGCATTTAAAAGCTTTCTAGACCAT
BS04684.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taspase1-RB | 1098 | CG5241-PB | 1..1098 | 17..1114 | 5490 | 100 | Plus |
| Taspase1-RA | 1098 | CG5241-PA | 1..1098 | 17..1114 | 5490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:48:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taspase1-RB | 2159 | CG5241-RB | 84..1184 | 15..1115 | 5505 | 100 | Plus |
| Taspase1-RA | 1503 | CG5241-RA | 84..1184 | 15..1115 | 5505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:48:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16086351..16087337 | 1030..44 | 4935 | 100 | Minus |
| 3L | 28110227 | 3L | 16086196..16086282 | 1115..1029 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:48:19 has no hits.
BS04684.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:56:39 Download gff for
BS04684.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5241-RA | 1..1098 | 17..1114 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:32:49 Download gff for
BS04684.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 63..1169 | 7..1115 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:59:54 Download gff for
BS04684.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 86..1181 | 17..1112 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:56:40 Download gff for
BS04684.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5241-RA | 63..1169 | 7..1115 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:26:49 Download gff for
BS04684.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 86..1181 | 17..1112 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:26:49 Download gff for
BS04684.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16086199..16086280 | 1031..1112 | 100 | <- | Minus |
| 3L | 16086351..16087336 | 45..1030 | 100 | <- | Minus |
| 3L | 16087413..16087440 | 17..44 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:59:54 Download gff for
BS04684.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16079299..16079380 | 1031..1112 | 100 | <- | Minus |
| arm_3L | 16079451..16080436 | 45..1030 | 100 | <- | Minus |
| arm_3L | 16080513..16080540 | 17..44 | 100 | | Minus |
BS04684.pep Sequence
Translation from 16 to 1113
> BS04684.pep
MAGFVAVHTGAGNCIDETKYQRVIKEACLRATEILRNGGSAVDACEAAIV
RLENCGYTNAGYGSNLCMDGSVQCDAAIMDGSTLNFGACTNVSRVKNPIQ
LARRICDAQSSPQLLERIPPMILAGTGAEHYADEVGCSMVEPGVLISSKA
KFQFNHYKSKYDLVVNSRLGKATSEESVQVPEPGNEVELAAALDTVGAVC
VDGAGNTAAGCSSGGILLKVPGRVGQAATYGAGCWATDTDELAIATCTTG
NGEYLMKTLLAREICHGAFSSDCAVTSLHKTFKQKFLDSPLLPRQQDLYA
GALTLLYYPGQSSGEVMWSHTTQSFCVGYMATNQRVPKFVHSPLPTYSVP
GRSCVVNGHNFHLRI*
BS04684.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taspase1-PB | 365 | CG5241-PB | 1..365 | 1..365 | 1926 | 100 | Plus |
| Taspase1-PA | 365 | CG5241-PA | 1..365 | 1..365 | 1926 | 100 | Plus |
| CG7860-PB | 332 | CG7860-PB | 8..254 | 7..264 | 287 | 32.6 | Plus |
| CG7860-PA | 332 | CG7860-PA | 8..254 | 7..264 | 287 | 32.6 | Plus |
