Clone Sequence Records
BS04694.3prime Sequence
885 bp (762 high quality bases) assembled on 2005-12-02
> BS04694.3prime
ATGGTCTAGAAAGCTTCTAAACCGGCGAATCATATTTACAGGTCATGGTT
GCCTCGATGTCCTCCACCGTTCGCGGCACAATCGCAAAGTTCTCCACGCC
AGTCTTCGTGATGAGCACATCGTCCTCGATGCGCACACCTCCGAAATTCC
GGAAGCGATTGAACATCTCTGCGTTAATGAATTTAGCAATGTTCGGATCG
GCCAGAGCGCGGTCCATCAGCCAGTTGATGAAGTAGCAGCCGGGTTCGAT
TGTGACATACATGCCGGCCTTAAGGATGCGGGCAAAGCGCAGCTTGCTCA
GCCACGGTTCACTGGGGCGCTTGGGCTCCTTGGGCAGATAGCCGCCCACG
TCGTGCACATCCAGACCGATCAAGTGGCCCAGGCCATGTGGCTGGAACAC
GCCCGAAACACCTGCCTCGAGCATCTCCTCCACATCGCCCTTGAGCATGC
CGCCCTCCTTCAGGCGCTGCAGCAACACCCTGCCCGCCAGCTTGTGCATG
TCCACCCAGGAGACTCCGTCACGGGCTGACTCTGTGACCGCATTGCGGGC
ATCCAGCACGGCATTGTAGATGAACTTCTGGTCGTCGGTGAACTTTCCAT
TGGCCGGGAATGTGCAGGTTATGTCGGCCGCATAGCCACAATAGTTGGCT
CCCATATCGAACAGGCAGAGATCACCATCCTGGACGGGCTTGCTGTTGGG
TGCGCCCGCGTGTCCATAGTGCAAGATCGACGAGTTCGTTCCGCTGCCGC
ATATGCAGGTGTAGGAGGCATGCCGGCAGCCGCCCACGGAGTAGGCGTGG
TGCAGGAACAGGGATTCGCCCCTCAATTCCATTCTACCGGGACGCATAAA
CCGCATCACCTTGATGTGCGCGTCCGAGGATACTT
BS04694.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:53:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5663-PA | 1476 | Dip-C-RA | 672..1476 | 821..17 | 4025 | 100 | Minus |
| CG5663-PA | 1476 | Dip-C-RA | 610..668 | 883..825 | 295 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:07:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip-C-RB | 1951 | CG5663-RB | 986..1858 | 883..10 | 4300 | 99.7 | Minus |
| Dip-C-RA | 1747 | CG5663-RA | 782..1654 | 883..10 | 4300 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:07:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12411907..12412774 | 16..883 | 4295 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:07:07 has no hits.
BS04694.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:55:17 Download gff for
BS04694.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-PA | 607..1476 | 17..885 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:18:55 Download gff for
BS04694.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5663-PA | 607..1476 | 17..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:44:09 Download gff for
BS04694.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 763..1646 | 1..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:36:42 Download gff for
BS04694.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 779..1662 | 1..885 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:36:42 Download gff for
BS04694.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12411894..12412776 | 1..885 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:44:09 Download gff for
BS04694.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8237616..8238498 | 1..885 | 99 | | Plus |
BS04694.5prime Sequence
923 bp (848 high quality bases) assembled on 2005-11-29
> BS04694.5prime
GAAGTTATCAGTCGACATGGCCGCCTTTCAGATGGGATCGGGTTACGCAG
TGCCCATGACCCTCTTCCGGAACAACAGGGATCGTGCTGGCAAGGCCATC
CTTAAGGAGCTGCTGCCGGGCCTCAAGTTCAACGACGGCAACCTGCTGGT
GCTCCTCGAGGGCGGCAAGGACCAGAGCCTGTACAACACCGACGTGGACT
ACGTTTTCCGGCAGGAGTCCTATTTCCAGTACTTGTTCGGTGTCAAGGAG
CCGGGCTGCTACGGCATCCTAACCATTGATGTGAAAACTGGTGCACAGAA
AAGTGTTCTCTTTGTTCCTCGCTTTCCCGATGAGTACGGCACCTGGATGG
GCGAACTGCTTGGGCTGCAGGAGTTCAAGGCCATGTACGAGGTGGACGAG
GTGTTTTATGTTGACGAAATGAGTGTTTATCTGGAGGGGGCGTCGCCCAA
GCTGATACTCACATTGAGTGGCACCAACAGCGATAGCGGGCTCACCCTTC
AGCCGCCCGACTTTGCTGGCAAGGAGAAGTATGTGACTGACTGCAATCTG
CTGTATCCAATTCTCTCTGAGTGCCGAGTGATCAAGTCACCCGAAGAGAT
CGAGGTGCTGCGCTACGTGGCCAAGGTATCCTCGGACGCGCACATCAAGG
TGATGCGGTTTATGCGTCCCGGTAGAATGGAATTTGAGGGCGAATCCCTG
TTCCTGCACCACGCCTACTCCGTGGGCGGCTGCCGGCATGCCTCCTACAC
CTGCATATGCGGCAGCGGAACGAACTCGTCGATCTTGCACTATGGACACG
CGGGCGCACCCAACAGCAAGCCCGTCCAGGATGGTGATCTCTGCCCTGTC
GATATGGGAGCCAACTATTGTGGCTATGCGGCCGACATAACCTGCACATT
CCNGGCCAATGGAAAGTTCACCG
BS04694.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5663-PA | 1476 | Dip-C-RA | 1..829 | 17..845 | 4145 | 100 | Plus |
| CG5663-PA | 1476 | Dip-C-RA | 833..907 | 849..923 | 356 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:41:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip-C-RB | 1951 | CG5663-RB | 376..1283 | 16..923 | 4484 | 99.7 | Plus |
| Dip-C-RA | 1747 | CG5663-RA | 172..1079 | 16..923 | 4484 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12412477..12413384 | 923..16 | 4484 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:41:47 has no hits.
BS04694.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:55:18 Download gff for
BS04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-PA | 1..907 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:18:56 Download gff for
BS04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5663-PA | 1..907 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:09:52 Download gff for
BS04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 150..1063 | 9..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:00 Download gff for
BS04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 166..1079 | 9..923 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:00 Download gff for
BS04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12412477..12413387 | 9..923 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:09:52 Download gff for
BS04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8238199..8239109 | 9..923 | 99 | | Minus |
BS04694.complete Sequence
1508 bp (1508 high quality bases) assembled on 2006-02-02
> BS04694.complete
GAAGTTATCAGTCGACATGGCCGCCTTTCAGATGGGATCGGGTTACGCAG
TGCCCATGACCCTCTTCCGGAACAACAGGGATCGTGCTGGCAAGGCCATC
CTTAAGGAGCTGCTGCCGGGCCTCAAGTTCAACGACGGCAACCTGCTGGT
GCTCCTCGAGGGCGGCAAGGACCAGAGCCTGTACAACACCGACGTGGACT
ACGTTTTCCGGCAGGAGTCCTATTTCCAGTACTTGTTCGGTGTCAAGGAG
CCGGGCTGCTACGGCATCCTAACCATTGATGTGAAAACTGGTGCACAGAA
AAGTGTTCTCTTTGTTCCTCGCTTTCCCGATGAGTACGGCACCTGGATGG
GCGAACTGCTTGGGCTGCAGGAGTTCAAGGCCATGTACGAGGTGGACGAG
GTGTTTTATGTTGACGAAATGAGTGTTTATCTGGAGGGGGCGTCGCCCAA
GCTGATACTCACATTGAGTGGCACCAACAGCGATAGCGGGCTCACCCTTC
AGCCGCCCGACTTTGCTGGCAAGGAGAAGTATGTGACTGACTGCAATCTG
CTGTATCCAATTCTCTCTGAGTGCCGAGTGATCAAGTCACCCGAAGAGAT
CGAGGTGCTGCGCTACGTGGCCAAGGTATCCTCGGACGCGCACATCAAGG
TGATGCGGTTTATGCGTCCCGGTAGAATGGAATTTGAGGGCGAATCCCTG
TTCCTGCACCACGCCTACTCCGTGGGCGGCTGCCGGCATGCCTCCTACAC
CTGCATATGCGGCAGCGGAACGAACTCGTCGATCTTGCACTATGGACACG
CGGGCGCACCCAACAGCAAGCCCGTCCAGGATGGTGATCTCTGCCTGTTC
GATATGGGAGCCAACTATTGTGGCTATGCGGCCGACATAACCTGCACATT
CCCGGCCAATGGAAAGTTCACCGACGACCAGAAGTTCATCTACAATGCCG
TGCTGGATGCCCGCAATGCGGTCACAGAGTCAGCCCGTGACGGAGTCTCC
TGGGTGGACATGCACAAGCTGGCGGGCAGGGTGTTGCTGCAGCGCCTGAA
GGAGGGCGGCATGCTCAAGGGCGATGTGGAGGAGATGCTCGAGGCAGGTG
TTTCGGGCGTGTTCCAGCCACATGGCCTGGGCCACTTGATCGGTCTGGAT
GTGCACGACGTGGGCGGCTATCTGCCCAAGGAGCCCAAGCGCCCCAGTGA
ACCGTGGCTGAGCAAGCTGCGCTTTGCCCGCATCCTTAAGGCCGGCATGT
ATGTCACAATCGAACCCGGCTGCTACTTCATCAACTGGCTGATGGACCGC
GCTCTGGCCGATCCGAACATTGCTAAATTCATTAACGCAGAGATGTTCAA
TCGCTTCCGGAATTTCGGAGGTGTGCGCATCGAGGACGATGTGCTCATCA
CGAAGACTGGCGTGGAGAACTTTGCGATTGTGCCGCGAACGGTGGAGGAC
ATCGAGGCAACCATGACCTGTAAATATGATTCGCCGGTTTAGAAGCTTTC
TAGACCAT
BS04694.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:50:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip-C-RB | 1476 | CG5663-PB | 1..1476 | 17..1492 | 7380 | 100 | Plus |
| Dip-C-RA | 1476 | CG5663-PA | 1..1476 | 17..1492 | 7380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:50:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip-C-RB | 1951 | CG5663-RB | 376..1853 | 16..1493 | 7390 | 100 | Plus |
| Dip-C-RA | 1747 | CG5663-RA | 172..1649 | 16..1493 | 7390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:50:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12411907..12413384 | 1493..16 | 7390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:50:40 has no hits.
BS04694.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:56:32 Download gff for
BS04694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 1..1476 | 17..1492 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:32:39 Download gff for
BS04694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 349..1845 | 9..1508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:32:36 Download gff for
BS04694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 157..1632 | 17..1492 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:56:32 Download gff for
BS04694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 349..1845 | 9..1508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:00 Download gff for
BS04694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 173..1648 | 17..1492 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:00 Download gff for
BS04694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12411908..12413383 | 17..1492 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:32:36 Download gff for
BS04694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8237630..8239105 | 17..1492 | 100 | | Minus |
BS04694.pep Sequence
Translation from 16 to 1491
> BS04694.pep
MAAFQMGSGYAVPMTLFRNNRDRAGKAILKELLPGLKFNDGNLLVLLEGG
KDQSLYNTDVDYVFRQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFV
PRFPDEYGTWMGELLGLQEFKAMYEVDEVFYVDEMSVYLEGASPKLILTL
SGTNSDSGLTLQPPDFAGKEKYVTDCNLLYPILSECRVIKSPEEIEVLRY
VAKVSSDAHIKVMRFMRPGRMEFEGESLFLHHAYSVGGCRHASYTCICGS
GTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTFPANGK
FTDDQKFIYNAVLDARNAVTESARDGVSWVDMHKLAGRVLLQRLKEGGML
KGDVEEMLEAGVSGVFQPHGLGHLIGLDVHDVGGYLPKEPKRPSEPWLSK
LRFARILKAGMYVTIEPGCYFINWLMDRALADPNIAKFINAEMFNRFRNF
GGVRIEDDVLITKTGVENFAIVPRTVEDIEATMTCKYDSPV*
BS04694.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip-C-PB | 491 | CG5663-PB | 1..491 | 1..491 | 2602 | 100 | Plus |
| Dip-C-PA | 491 | CG5663-PA | 1..491 | 1..491 | 2602 | 100 | Plus |
| CG9581-PA | 545 | CG9581-PA | 124..510 | 45..465 | 304 | 27.4 | Plus |
