Clone BS04695 Report

Search the DGRC for BS04695

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:46
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptDmn-RA
Protein status:BS04695.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS04695.3prime Sequence

918 bp (817 high quality bases) assembled on 2005-12-02

> BS04695.3prime
ATGGTCTAGAAAGCTTTCATTTGGCAGACGATATGGCCGCCACACGCTGC
TCCACCTTGGCCACCTTGCTGTTGATAGTCTCCAGATTCTGGGCGAAAGT
CTCCTGTACGGAATGCAGCAGCTCCTTGTTGTTCACCAAGCTAGTGGTGA
TGGTTCCCTGCTTCTGCTCAATCTCTGCGATGATCTTGGCGAAATTGTTT
GCATATTTATGGAGGGCCTCGAGGGCTTGCATGCGTTCGATGACGTGCGG
CAGTATTTCCACCACTGGCTCCGTGCGCTTCGCGATGTCGTATAGTTCCG
TAATCTTCTGATCTCGTTTGGCGTCCTGGGCACTGCCGCTGGACTTTTCG
GCGATAGCATCCATCTTGCCGGCCAGCGAGGTCAGGCGCTGCTCGATGGT
GTCCAGTTTATCAGGCTGTATCAGGGCCGCCTTGGTGCTTAGATGACGCA
CTGCCTCTAGTACATTGGTGGTGTTGGTGGCGGCGGTAAGGCGGCTCAAC
TTGTCCGGCTGAGCGCCCAGCACCTTCTCCAGCTGCGAGATTCGCTGCTC
TAGACTGGCTACGCGGGCCGTGGCCGCCAGATCGGTGCCAGGCGTGGGTA
TGGCTGTGAGAACGCCGGACTGCTTGAACTCCTCCACCTGGCTAATGAGT
GCTTTCACCTGCTTACTTCCAGGCGTCTGCTCCTTGCCCAGCACTTGCTC
CAGCTTCAGCGACTCCAGCACCTTTCGGGCCGTGCTGATAACCGTGGCCA
CCGCATCGTACGACTGCTTCTCCTCGTCGGCTACCTTGCGGTCCACCTGC
AAGGCGGCCACCTCGTTCAGAAGCTCGTTCATCTCGATCTGCAGGCGCTG
GCACTTCTGCACCGGCGTCTCCTTCTCGCCCTGGCCAACCAGCTCGTAGT
CGCTGGAGCCGCGCGTAT

BS04695.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG8269-PA 1143 Dmn-RA 242..1143 918..17 4510 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:06:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmn-RA 1358 CG8269-RA 364..1265 918..17 4510 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8892279..8892995 918..202 3585 100 Minus
2R 25286936 2R 8893061..8893246 202..17 930 100 Minus
Blast to na_te.dros performed on 2015-02-11 18:06:54 has no hits.

BS04695.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:55:19 Download gff for BS04695.3prime
Subject Subject Range Query Range Percent Splice Strand
Dmn-PA 242..1143 17..918 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:18:57 Download gff for BS04695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8269-PA 242..1143 17..918 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:44:07 Download gff for BS04695.3prime
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 364..1265 17..918 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:36:12 Download gff for BS04695.3prime
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 364..1265 17..918 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:36:12 Download gff for BS04695.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8892279..8892995 202..918 100 -> Minus
2R 8893062..8893246 17..201 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:44:07 Download gff for BS04695.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4779784..4780500 202..918 100 -> Minus
arm_2R 4780567..4780751 17..201 100   Minus

BS04695.5prime Sequence

902 bp (824 high quality bases) assembled on 2005-11-29

> BS04695.5prime
GAAGTTATCAGTCGACATGGCCGATCCCAAGTTCCAGAACCTACCGGGAA
TAGCTTATGACCAGCCGGACGTGTACGAAACTCCAGATGACCCGGAGCTC
GATACATCCGACTACTACGAAGAGGAGCCGGAGAACGAAGCCATCGAGCG
ACTGCACATCTCGCCGAGCGTCGCTCACAAGCGCTTCAGCGGAGCAACGG
TCGAGGGGAGTGTGGACTTCACGGATCGCATTGGACGACGCATGTGCCGG
GGTTACGATACGCGCGGCTCCAGCGACTACGAGCTGGTTGGCCAGGGCGA
GAAGGAGACGCCGGTGCAGAAGTGCCAGCGCCTGCAGATCGAGATGAACG
AGCTTCTGAACGAGGTGGCCGCCTTGCAGGTGGACCGCAAGGTAGCCGAC
GAGGAGAAGCAGTCGTACGATGCGGTGGCCACGGTTATCAGCACGGCCCG
AAAGGTGCTGGAGTCGCTGAAGCTGGAGCAAGTGCTGGGCAAGGAGCAGA
CGCCTGGAAGTAAGCAGGTGAAAGCACTCATTAGCCAGGTGGAGGAGTTC
AAGCAGTCCGGCGTTCTCACAGCCATACCCACGCCTGGCACCGATCTGGC
GGCCACGGCCCGCGTAGCCAGTCTAGAGCAGCGAATCTCGCAGCTGGAGA
AGGTGCTGGGCGCTCAGCCGGACAAGTTGAGCCGCCTTACCGCCGCCACC
AACACCACCAATGTACTAGAGGCAGTGCGTCATCTAAGCACCAAGGCGGC
CCTGATACAGCCTGATAAACTGGACACCATCGAGCAGCGCCTGACCTCGC
TGGCCGGCAAGATGGATGCTATCGCCGAAAAGTCCAGCGGCAGTGCCCAG
GACGCCAAACGAGATCAGAAGATTACGGAACTATACGACATCGCGAAGCG
CA

BS04695.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:53:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG8269-PA 1143 Dmn-RA 1..886 17..902 4430 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmn-RA 1358 CG8269-RA 123..1008 17..902 4430 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:49:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8892074..8892923 53..902 4250 100 Plus
2R 25286936 2R 8891954..8891990 17..53 185 100 Plus
Blast to na_te.dros performed on 2015-02-11 11:49:23 has no hits.

BS04695.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:55:20 Download gff for BS04695.5prime
Subject Subject Range Query Range Percent Splice Strand
Dmn-PA 1..885 17..901 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:18:59 Download gff for BS04695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8269-PA 1..885 17..901 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:20:44 Download gff for BS04695.5prime
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 118..1007 9..901 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:12:25 Download gff for BS04695.5prime
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 118..1007 9..901 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:12:25 Download gff for BS04695.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8892074..8892922 53..901 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:20:44 Download gff for BS04695.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4779579..4780427 53..901 100   Plus

BS04695.complete Sequence

1175 bp (1175 high quality bases) assembled on 2006-02-02

GenBank Submission: FJ635012

> BS04695.complete
GAAGTTATCAGTCGACATGGCCGATCCCAAGTTCCAGAACCTACCGGGAA
TAGCTTATGACCAGCCGGACGTGTACGAAACTCCAGATGACCCGGAGCTC
GATACATCCGACTACTACGAAGAGGAGCCGGAGAACGAAGCCATCGAGCG
ACTGCACATCTCGCCGAGCGTCGCTCACAAGCGCTTCAGCGGAGCAACGG
TCGAGGGGAGTGTGGACTTCACGGATCGCATTGGACGACGCATGTGCCGG
GGTTACGATACGCGCGGCTCCAGCGACTACGAGCTGGTTGGCCAGGGCGA
GAAGGAGACGCCGGTGCAGAAGTGCCAGCGCCTGCAGATCGAGATGAACG
AGCTTCTGAACGAGGTGGCCGCCTTGCAGGTGGACCGCAAGGTAGCCGAC
GAGGAGAAGCAGTCGTACGATGCGGTGGCCACGGTTATCAGCACGGCCCG
AAAGGTGCTGGAGTCGCTGAAGCTGGAGCAAGTGCTGGGCAAGGAGCAGA
CGCCTGGAAGTAAGCAGGTGAAAGCACTCATTAGCCAGGTGGAGGAGTTC
AAGCAGTCCGGCGTTCTCACAGCCATACCCACGCCTGGCACCGATCTGGC
GGCCACGGCCCGCGTAGCCAGTCTAGAGCAGCGAATCTCGCAGCTGGAGA
AGGTGCTGGGCGCTCAGCCGGACAAGTTGAGCCGCCTTACCGCCGCCACC
AACACCACCAATGTACTAGAGGCAGTGCGTCATCTAAGCACCAAGGCGGC
CCTGATACAGCCTGATAAACTGGACACCATCGAGCAGCGCCTGACCTCGC
TGGCCGGCAAGATGGATGCTATCGCCGAAAAGTCCAGCGGCAGTGCCCAG
GACGCCAAACGAGATCAGAAGATTACGGAACTATACGACATCGCGAAGCG
CACGGAGCCAGTGGTGGAAATACTGCCGCACGTCATCGAACGCATGCAAG
CCCTCGAGGCCCTCCATAAATATGCAAACAATTTCGCCAAGATCATCGCA
GAGATTGAGCAGAAGCAGGGAACCATCACCACTAGCTTGGTGAACAACAA
GGAGCTGCTGCATTCCGTACAGGAGACTTTCGCCCAGAATCTGGAGACTA
TCAACAGCAAGGTGGCCAAGGTGGAGCAGCGTGTGGCGGCCATATCGTCT
GCCAAATGAAAGCTTTCTAGACCAT

BS04695.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmn-RA 1143 CG8269-PA 1..1143 17..1159 5715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:56:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmn-RA 1358 CG8269-RA 123..1265 17..1159 5715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8892074..8892995 53..974 4610 100 Plus
2R 25286936 2R 8893061..8893246 974..1159 930 100 Plus
2R 25286936 2R 8891954..8891990 17..53 185 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:56:03 has no hits.

BS04695.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:56:21 Download gff for BS04695.complete
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 1..1143 17..1159 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:32:27 Download gff for BS04695.complete
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 110..1257 9..1159 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:47:08 Download gff for BS04695.complete
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 123..1264 17..1158 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:56:21 Download gff for BS04695.complete
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 110..1257 9..1159 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:34:29 Download gff for BS04695.complete
Subject Subject Range Query Range Percent Splice Strand
Dmn-RA 123..1264 17..1158 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:34:29 Download gff for BS04695.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8891954..8891989 17..52 100 -> Plus
2R 8892074..8892995 53..974 100 -> Plus
2R 8893062..8893245 975..1158 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:47:08 Download gff for BS04695.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4779459..4779494 17..52 100 -> Plus
arm_2R 4779579..4780500 53..974 100 -> Plus
arm_2R 4780567..4780750 975..1158 100   Plus

BS04695.pep Sequence

Translation from 16 to 1158

> BS04695.pep
MADPKFQNLPGIAYDQPDVYETPDDPELDTSDYYEEEPENEAIERLHISP
SVAHKRFSGATVEGSVDFTDRIGRRMCRGYDTRGSSDYELVGQGEKETPV
QKCQRLQIEMNELLNEVAALQVDRKVADEEKQSYDAVATVISTARKVLES
LKLEQVLGKEQTPGSKQVKALISQVEEFKQSGVLTAIPTPGTDLAATARV
ASLEQRISQLEKVLGAQPDKLSRLTAATNTTNVLEAVRHLSTKAALIQPD
KLDTIEQRLTSLAGKMDAIAEKSSGSAQDAKRDQKITELYDIAKRTEPVV
EILPHVIERMQALEALHKYANNFAKIIAEIEQKQGTITTSLVNNKELLHS
VQETFAQNLETINSKVAKVEQRVAAISSAK*

BS04695.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmn-PA 380 CG8269-PA 1..380 1..380 1881 100 Plus