Clone Sequence Records
BS04711.5prime Sequence
378 bp (377 high quality bases) assembled on 2005-11-29
> BS04711.5prime
GAAGTTATCAGTCGACATGCTCCACTCCGTCGTTAAGGGCGGCTGCCAGC
TCGCCGTTGAACTGCAGCAGGCAACCCAGAGCCCCAAAGTATCCCTCGTG
CTCCAGGAAAAGACCCTTCATTGTGCCATTGGACCAGAACTCCATTGCGT
ACGCCAGCAGCTTCATGGAAATGGGGTTAACTCGCAGAAAGTTGCCCACA
AAGACGACCTGAAATGGGTTTGTTGCTCAGTCTACGAGGATATGTATGTA
ACGAAAATTGATACTTACCCTATCGATCTTCTCATTCAGCGCGCACATCC
TTGCTATGGAGCCGATATTATTCGTTATGGTGACCAGAGTGGCGTTGGCC
AGATCTTCGCGTGAAAGCTTTCTAGACC
BS04711.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:53:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5725-PD | 1206 | fbl-RD | 909..1101 | 209..17 | 965 | 100 | Minus |
| CG5725-PB | 1254 | fbl-RB | 957..1149 | 209..17 | 965 | 100 | Minus |
| CG5725-PA | 1260 | fbl-RA | 963..1155 | 209..17 | 965 | 100 | Minus |
| CG5725-PC | 1206 | fbl-RC | 909..1101 | 209..17 | 965 | 100 | Minus |
| CG5725-PE | 1539 | fbl-RE | 1242..1434 | 209..17 | 965 | 100 | Minus |
| CG5725-PD | 1206 | fbl-RD | 814..911 | 364..267 | 490 | 100 | Minus |
| CG5725-PB | 1254 | fbl-RB | 862..959 | 364..267 | 490 | 100 | Minus |
| CG5725-PA | 1260 | fbl-RA | 868..965 | 364..267 | 490 | 100 | Minus |
| CG5725-PC | 1206 | fbl-RC | 814..911 | 364..267 | 490 | 100 | Minus |
| CG5725-PE | 1539 | fbl-RE | 1147..1244 | 364..267 | 490 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:42:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 209..17 | 965 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 209..17 | 965 | 100 | Minus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 209..17 | 965 | 100 | Minus |
| fbl-RG | 2352 | CG5725-RG | 1229..1326 | 364..267 | 490 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 706..803 | 364..267 | 490 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390730..20391077 | 364..17 | 1740 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:42:56 has no hits.
BS04711.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:55:39 Download gff for
BS04711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PA | 868..962 | 270..364 | 100 | | Minus |
| CG5725-PA | 963..1157 | 14..209 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:19:23 Download gff for
BS04711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PB | 862..956 | 270..364 | 100 | == | Minus |
| CG5725-PB | 957..1151 | 14..209 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 11:00:31 Download gff for
BS04711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1263..1357 | 270..364 | 100 | == | Minus |
| fbl-RE | 1358..1552 | 14..209 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:15:07 Download gff for
BS04711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1263..1357 | 270..364 | 100 | == | Minus |
| fbl-RE | 1358..1552 | 14..209 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:15:07 Download gff for
BS04711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20390730..20391079 | 14..364 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 11:00:31 Download gff for
BS04711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20383830..20384179 | 14..364 | 99 | | Minus |
BS04711.3prime Sequence
378 bp (377 high quality bases) assembled on 2005-12-02
> BS04711.3prime
ATGGTCTAGAAAGCTTTCACGCGAAGATCTGGCCAACGCCACTCTGGTCA
CCATAACGAATAATATCGGCTCCATAGCAAGGATGTGCGCGCTGAATGAG
AAGATCGATAGGGTAAGTATCAATTTTCGTTACATACATATCCTCGTAGA
CTGAGCAACAAACCCATTTCAGGTCGTCTTTGTGGGCAACTTTCTGCGAG
TTAACCCCATTTCCATGAAGCTGCTGGCGTACGCAATGGAGTTCTGGTCC
AATGGCACAATGAAGGGTCTTTTCCTGGAGCACGAGGGATACTTTGGGGC
TCTGGGTTGCCTGCTGCAGTTCAACGGCGAGCTGGCAGCCGCCCTTAACG
ACGGAGTGGAGCATGTCGACTGATAACT
BS04711.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:53:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5725-PD | 1206 | fbl-RD | 909..1101 | 172..364 | 965 | 100 | Plus |
| CG5725-PB | 1254 | fbl-RB | 957..1149 | 172..364 | 965 | 100 | Plus |
| CG5725-PA | 1260 | fbl-RA | 963..1155 | 172..364 | 965 | 100 | Plus |
| CG5725-PC | 1206 | fbl-RC | 909..1101 | 172..364 | 965 | 100 | Plus |
| CG5725-PE | 1539 | fbl-RE | 1242..1434 | 172..364 | 965 | 100 | Plus |
| CG5725-PD | 1206 | fbl-RD | 814..911 | 17..114 | 490 | 100 | Plus |
| CG5725-PB | 1254 | fbl-RB | 862..959 | 17..114 | 490 | 100 | Plus |
| CG5725-PA | 1260 | fbl-RA | 868..965 | 17..114 | 490 | 100 | Plus |
| CG5725-PC | 1206 | fbl-RC | 814..911 | 17..114 | 490 | 100 | Plus |
| CG5725-PE | 1539 | fbl-RE | 1147..1244 | 17..114 | 490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 172..364 | 965 | 100 | Plus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 172..364 | 965 | 100 | Plus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 172..364 | 965 | 100 | Plus |
| fbl-RG | 2352 | CG5725-RG | 1229..1326 | 17..114 | 490 | 100 | Plus |
| fbl-RF | 1370 | CG5725-RF | 706..803 | 17..114 | 490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390730..20391077 | 17..364 | 1740 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:25:18 has no hits.
BS04711.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:55:38 Download gff for
BS04711.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PA | 868..962 | 17..111 | 100 | | Plus |
| CG5725-PA | 963..1157 | 172..367 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:19:22 Download gff for
BS04711.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PB | 862..956 | 17..111 | 100 | == | Plus |
| CG5725-PB | 957..1151 | 172..367 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:00:26 Download gff for
BS04711.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1263..1357 | 17..111 | 100 | == | Plus |
| fbl-RE | 1358..1552 | 172..367 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:49:29 Download gff for
BS04711.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1358..1552 | 172..367 | 99 | | Plus |
| fbl-RE | 1263..1357 | 17..111 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:49:29 Download gff for
BS04711.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20390730..20391079 | 17..367 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:00:26 Download gff for
BS04711.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20383830..20384179 | 17..367 | 99 | | Plus |
BS04711.complete Sequence
380 bp (380 high quality bases) assembled on 2006-02-02
> BS04711.complete
GAAGTTATCAGTCGACATGCTCCACTCCGTCGTTAAGGGCGGCTGCCAGC
TCGCCGTTGAACTGCAGCAGGCAACCCAGAGCCCCAAAGTATCCCTCGTG
CTCCAGGAAAAGACCCTTCATTGTGCCATTGGACCAGAACTCCATTGCGT
ACGCCAGCAGCTTCATGGAAATGGGGTTAACTCGCAGAAAGTTGCCCACA
AAGACGACCTGAAATGGGTTTGTTGCTCAGTCTACGAGGATATGTATGTA
ACGAAAATTGATACTTACCCTATCGATCTTCTCATTCAGCGCGCACATCC
TTGCTATGGAGCCGATATTATTCGTTATGGTGACCAGAGTGGCGTTGGCC
AGATCTTCGCGTGAAAGCTTTCTAGACCAT
BS04711.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 14:21:17 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 209..17 | 965 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 209..17 | 965 | 100 | Minus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 209..17 | 965 | 100 | Minus |
| fbl-RG | 2352 | CG5725-RG | 1229..1326 | 364..267 | 490 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 706..803 | 364..267 | 490 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390730..20391077 | 364..17 | 1740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:21:16 has no hits.
BS04711.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 23:21:37 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:30 Download gff for
BS04711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33969-RB | 2266..2615 | 14..364 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:45 Download gff for
BS04711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1264..1357 | 270..363 | 100 | == | Minus |
| fbl-RE | 1358..1550 | 17..209 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:37 Download gff for
BS04711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33969-RB | 2266..2615 | 14..364 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:09:26 Download gff for
BS04711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1358..1550 | 17..209 | 100 | | Minus |
| fbl-RE | 1264..1357 | 270..363 | 100 | == | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:09:26 Download gff for
BS04711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20390731..20391077 | 17..363 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:45 Download gff for
BS04711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20383831..20384177 | 17..363 | 100 | | Minus |
BS04711.pep Sequence
Translation from 16 to 363
> BS04711.pep
MLHSVVKGGCQLAVELQQATQSPKVSLVLQEKTLHCAIGPELHCVRQQLH
GNGVNSQKVAHKDDLKWVCCSVYEDMYVTKIDTYPIDLLIQRAHPCYGAD
IIRYGDQSGVGQIFA*
Sequence BS04711.pep has no blast hits.
