Clone BS04801 Report

Search the DGRC for BS04801

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:48
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG15011-RA
Protein status:BS04801.pep: full length peptide match
Sequenced Size:2555

Clone Sequence Records

BS04801.3prime Sequence

885 bp (822 high quality bases) assembled on 2005-12-02

> BS04801.3prime
ATGGTCTAGAAAGCTTTTAACTGTCCGCGTAGAAAGCCACCACAATTGCA
CCCACAACTGTTAGAATGGATACTGCATAGATTGCTCTACGTTGCCAATC
GATCTTGGTCTTGGCCGGTCCAGAACCCACAGTTTTGCGCTCCTTGTGCT
TGCGTTTGCCGAACTTGGCCTCGAACTTCTCGAGTTCCAGGCGGTTTCTT
TCTTCCTCGTCGCGACGCTTTTGTTCCAGCTGCAGTTGCTCTGCCGCCTG
GACGCGAATTTGCTCCGCCTTGCAGTTCGAGTCGCAATCCAAGAATGTCT
GACCAGCACGGTGTTTGTCACAGGCAATCTCCTGCTTGAGTCGCTTGCAG
GCGCAGAAAATGCGAACCTTCTTGCGGCACAACTCGGGATTTGGGCACTT
GCCTGTGTGGCAGATGGCTGTGCAGCGATGTCCGCAAGGATAATTCTTCA
AGCATCGATTACCGCAGCTCCGTAGCTTTTCTCTTCGCTCGATGATCTCC
TGGACCGATCCCGTTTCATCATAATACTCGTTGCACTTGTAAACCAACTG
GTTGAGTCCACAGTGACACTTGGTCTTAATCACAAAGTTGCAGGGCGCAC
AGGGCGGTGGATGACATCCTTTGGGACAGGCGTGAATACATCCGGTTGGT
CGGGGAACGGTGCAACCCTCCTCGCAGTTGGCACAGCCAGTTTGCGCAGA
CATATCCTGNGGAAGCGGTACGAAATGGCAAACCAATGAACACTTGTGAT
TGCCGCACTTAAGCTGACGTGCACACGATCGCTGACAGGAAGTGGGTTTG
GAGTTCCAGCATGGCCAAGTGGCAACCTCATGACCTCCGATACAGGTGAC
AATGACGCCTTCCTCGCACCGTGGATGTGGTAATG

BS04801.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-PA 2523 CG15011-RA 1655..2523 885..17 4326 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:02:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-RA 2631 CG15011-RA 1680..2549 885..16 4339 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:01:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4256560..4257002 443..885 2204 99.8 Plus
3L 28110227 3L 4256073..4256499 16..442 2135 100 Plus
Blast to na_te.dros performed on 2015-02-11 18:02:04 has no hits.

BS04801.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:57:53 Download gff for BS04801.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-PA 1655..2523 17..885 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:22:21 Download gff for BS04801.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-PA 1655..2523 17..885 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:55:30 Download gff for BS04801.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 1680..2549 16..885 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:39:22 Download gff for BS04801.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 1680..2549 16..885 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:39:22 Download gff for BS04801.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4256073..4256499 16..442 100 <- Plus
3L 4256560..4257002 443..885 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:55:30 Download gff for BS04801.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4256073..4256499 16..442 100 <- Plus
arm_3L 4256560..4257002 443..885 99   Plus

BS04801.5prime Sequence

857 bp (819 high quality bases) assembled on 2005-12-02

> BS04801.5prime
GAAGTTATCAGTCGACATGGAAAAGTTTAATAAAGCGCAAGCTAAAAATT
TGGCTGCCGCCCAAAAACTGGTGGACACCTACGCCTCCAGCTCCGAGGAT
GAAGGCGAACTGGATGAGAATCACATTTTGGAACTCCTATACAAGAACTA
CAAACCGTCGGACAACGCAGGAAGCTCAAAGGAAGCGGCACGCACCAGTA
CGTTTCTGGAAAACACTCTACACTCGGGAGCGGCAACCTGTCTCATTTGC
ATCGGAAGCATTCGGCGGGTGGAGGCCATTTGGTCTTGCGAGAGCTGTTA
CTGCTTCTTTCACTTGAAGTGCATCCAACGGTGGGCCAACGACAGCATGA
TGCAGATGAAGGTAAAGGCGGCAGAGCAGCAGAACGGCCAGGGCCACTAC
AATCATCTGGGCGAATTTGTGCCGCCCAAGCGACAGAAATCCCTTCACTG
GTGCTGCCCCAAGTGCCGCAGGGACTACCAACCGGCCGATAAGCCCACGC
AGTACAACTGCTTCTGCGGCAAGGAGGTGAACCCCGAGAACCAGCCCTTC
CTTGTGCCCCACTCATGCGGAGAGCACTGCGGAAAGCTTTTGCAACCGAA
GTGTGGGCACGATTGCAAGCTGCTATGTCATCCGGGGCCATGTCCTCCTT
GTGCGCAGCAGGCGCAGGTCTCGTGCCTGTGTGGTAAATCTAGTCCTAGG
TCCGTGAGGTGCATTGACAAGCAGTGGACGTGTCAGCAGACTTGCAAGGA
ACTTCTAGCCTGCGGCAAGCACAAATGTAATCAGGTGTGTCATCAGCCAG
GAAAGTGTCCTCCATGCACCAGCAAAAGCTTACAACCTTGCGAGTGCCAG
CGGGAGT

BS04801.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:54:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-PA 2523 CG15011-RA 1..841 17..857 4205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-RA 2631 CG15011-RA 26..866 17..857 4205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:25:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4258336..4258947 742..131 3060 100 Minus
3L 28110227 3L 4258160..4258274 857..743 575 100 Minus
3L 28110227 3L 4259013..4259127 131..17 575 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:25:15 has no hits.

BS04801.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:57:54 Download gff for BS04801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-PA 1..841 17..857 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:22:22 Download gff for BS04801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-PA 1..841 17..857 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:51:02 Download gff for BS04801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..866 17..857 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:02:06 Download gff for BS04801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..866 17..857 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:02:06 Download gff for BS04801.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4258160..4258274 743..857 100 <- Minus
3L 4258336..4258946 132..742 100 <- Minus
3L 4259013..4259127 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:51:02 Download gff for BS04801.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4258160..4258274 743..857 100 <- Minus
arm_3L 4258336..4258946 132..742 100 <- Minus
arm_3L 4259013..4259127 17..131 100   Minus

BS04801.complete Sequence

2555 bp assembled on 2009-08-24

GenBank Submission: KX793809

> BS04801.complete
GAAGTTATCAGTCGACATGGAAAAGTTTAATAAAGCGCAAGCTAAAAATT
TGGCTGCCGCCCAAAAACTGGTGGACACCTACGCCTCCAGCTCCGAGGAT
GAAGGCGAACTGGATGAGAATCACATTTTGGAACTCCTATACAAGAACTA
CAAACCGTCGGACAACGCAGGAAGCTCAAAGGAAGCGGCACGCACCAGTA
CGTTTCTGGAAAACACTCTACACTCGGGAGCGGCAACCTGTCTCATTTGC
ATCGGAAGCATTCGGCGGGTGGAGGCCATTTGGTCTTGCGAGAGCTGTTA
CTGCTTCTTTCACTTGAAGTGCATCCAACGGTGGGCCAACGACAGCATGA
TGCAGATGAAGGTAAAGGCGGCAGAGCAGCAGAACGGCCAGGGCCACTAC
AATCATCTGGGCGAATTTGTGCCGCCCAAGCGACAGAAATCCCTTCACTG
GTGCTGCCCCAAGTGCCGCAGGGACTACCAACCGGCCGATAAGCCCACGC
AGTACAACTGCTTCTGCGGCAAGGAGGTGAACCCCGAGAACCAGCCCTTC
CTTGTGCCCCACTCATGCGGAGAGCACTGCGGAAAGCTTTTGCAACCGAA
GTGTGGGCACGATTGCAAGCTGCTATGTCATCCGGGGCCATGTCCTCCTT
GTGCGCAGCAGGCGCAGGTCTCGTGCCTGTGTGGTAAATCTAGTCCTAGG
TCCGTGAGGTGCATTGACAAGCAGTGGACGTGTCAGCAGACTTGCAAGGA
ACTTCTAGCCTGCGGCAAGCACAAATGTAATCAGGTGTGTCATCAGCCAG
GAAAGTGTCCTCCATGCACCAGCAAAAGCTTACAACCTTGCGAGTGCCAG
CGGGAGTCGAAGATGGTCAACTGCTCCGATCGGAAATGGAAGTGTCAGAA
TGTTTGTGGAGCTCCATTTGCTTGTGGTTTGCACATTTGCGAGAAGGTGT
GTCACGCTGGACCCTGCGGAGATGGAGAGTGTCCTTTGCAAGTCAGGAGT
TGCCCATGCGGCAAGAATACCCAGGTAAGACCCTGTAATGAGACAGAGGA
AACCTGTGGCGATACGTGCCAAAAACTTTTGTCCTGTGGCCAGCACACTT
GCACCCAGCGTTGTCATCGTGGACCTTGCATTTCCTGCCCAATAAGAACC
AAAAAGAAGTGTCGTTGTGGTCTGCACGAAAAGGAGTTGCCCTGCTCCAA
AGAGTTTGCATGCGAGACTAAATGCAAGCAAATGCGTGATTGCGGCAAGC
ATGCATGCAATAGAAAGTGCTGTGGGGACCAGTGTCCACCGTGCGAAAAG
ATTTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAATGTCAGTCCGTGTG
CCACAACGGACCTTGCTATCCGTGTAAACTGGAATCCCAGATTAACTGCC
GCTGTGGAAAGACCAAAAAAAGTGTTCCTTGTGGCAGGGAAAGAAGTGCA
CGCATTGTCTGCTTGGAACTCTGTCGCATAACTCCCAAATGTCACCATGC
CATTAAGCATCGTTGTCACAAGGGTGACTGTCCTCCATGTGGCCAAGTGT
GCGGTCTACCCAATGACACCAGCAAGTGTGGGCACATCTGTAAGGCACGA
TGCCACGAGGCAGTTAGAGTTAATAAACCCAAAGAGGCTAGGCCACAGGC
CAAAAAGTATGAGTATAAGGCATTACCACATCCACGGTGCGAGGAAGGCG
TCATTGTCACCTGTATCGGAGGTCATGAGGTTGCCACTTGGCCATGCTGG
AACTCCAAACCCACTTCCTGTCAGCGATCGTGTGCACGTCAGCTTAAGTG
CGGCAATCACAAGTGTTCATTGGTTTGCCATTTCGTACCGCTTCCCCAGG
ATATGTCTGCGCAAACTGGCTGTGCCAACTGCGAGGAGGGTTGCACCGTT
CCCCGACCAACCGGATGTATTCACGCCTGTCCCAAAGGATGTCATCCACC
GCCCTGTGCGCCCTGCAACTTTGTGATTAAGACCAAGTGTCACTGTGGAC
TCAACCAGTTGGTTTACAAGTGCAACGAGTATTATGATGAAACGGGATCG
GTCCAGGAGATCATCGAGCGAAGAGAAAAGCTACGGAGCTGCGGTAATCG
ATGCTTGAAGAATTATCCTTGCGGACATCGCTGCACAGCCATCTGCCACA
CAGGCAAGTGCCCAAATCCCGAGTTGTGCCGCAAGAAGGTTCGCATTTTC
TGCGCCTGCAAGCGACTCAAGCAGGAGATTGCCTGTGACAAACACCGTGC
TGGTCAGACATTCTTGGATTGCGACTCGAACTGCAAGGCGGAGCAAATTC
GCGTCCAGGCGGCAGAGCAACTGCAGCTGGAACAAAAGCGTCGCGACGAG
GAAGAAAGAAACCGCCTGGAACTCGAGAAGTTCGAGGCCAAGTTCGGCAA
ACGCAAGCACAAGGAGCGCAAAACTGTGGGTTCTGGACCGGCCAAGACCA
AGATCGATTGGCAACGTAGAGCAATCTATGCAGTATCCATTCTAACAGTT
GTGGGTGCAATTGTGGTGGCTTTCTACGCGGACAGTTAAAAGCTTTCTAG
ACCAT

BS04801.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:31:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-RA 2523 CG15011-PA 1..2523 17..2539 12615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:31:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-RA 2631 CG15011-RA 26..2549 17..2540 12620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4258336..4258947 742..131 3060 100 Minus
3L 28110227 3L 4256560..4257017 2113..1656 2290 100 Minus
3L 28110227 3L 4256073..4256499 2540..2114 2135 100 Minus
3L 28110227 3L 4257312..4257524 1476..1264 1065 100 Minus
3L 28110227 3L 4257076..4257257 1657..1476 910 100 Minus
3L 28110227 3L 4258114..4258274 903..743 805 100 Minus
3L 28110227 3L 4257584..4257715 1267..1136 660 100 Minus
3L 28110227 3L 4257772..4257888 1135..1019 585 100 Minus
3L 28110227 3L 4257946..4258062 1018..902 585 100 Minus
3L 28110227 3L 4259013..4259127 131..17 575 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:31:04 has no hits.

BS04801.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:28 Download gff for BS04801.complete
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..2546 17..2537 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:49:58 Download gff for BS04801.complete
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..2546 17..2537 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:33 Download gff for BS04801.complete
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..2546 17..2537 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:33 Download gff for BS04801.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4256076..4256499 2114..2537 100 <- Minus
3L 4256560..4257015 1658..2113 100 <- Minus
3L 4257076..4257256 1477..1657 100 <- Minus
3L 4257312..4257520 1268..1476 100 <- Minus
3L 4257584..4257715 1136..1267 100 <- Minus
3L 4257772..4257888 1019..1135 100 <- Minus
3L 4257946..4258062 902..1018 100 <- Minus
3L 4258116..4258274 743..901 100 <- Minus
3L 4258336..4258946 132..742 100 <- Minus
3L 4259013..4259127 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:49:58 Download gff for BS04801.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4259013..4259127 17..131 100   Minus
arm_3L 4256076..4256499 2114..2537 100 <- Minus
arm_3L 4256560..4257015 1658..2113 100 <- Minus
arm_3L 4257076..4257256 1477..1657 100 <- Minus
arm_3L 4257312..4257520 1268..1476 100 <- Minus
arm_3L 4257584..4257715 1136..1267 100 <- Minus
arm_3L 4257772..4257888 1019..1135 100 <- Minus
arm_3L 4257946..4258062 902..1018 100 <- Minus
arm_3L 4258116..4258274 743..901 100 <- Minus
arm_3L 4258336..4258946 132..742 100 <- Minus

BS04801.pep Sequence

Translation from 16 to 2538

> BS04801.pep
MEKFNKAQAKNLAAAQKLVDTYASSSEDEGELDENHILELLYKNYKPSDN
AGSSKEAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHL
KCIQRWANDSMMQMKVKAAEQQNGQGHYNHLGEFVPPKRQKSLHWCCPKC
RRDYQPADKPTQYNCFCGKEVNPENQPFLVPHSCGEHCGKLLQPKCGHDC
KLLCHPGPCPPCAQQAQVSCLCGKSSPRSVRCIDKQWTCQQTCKELLACG
KHKCNQVCHQPGKCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAP
FACGLHICEKVCHAGPCGDGECPLQVRSCPCGKNTQVRPCNETEETCGDT
CQKLLSCGQHTCTQRCHRGPCISCPIRTKKKCRCGLHEKELPCSKEFACE
TKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPC
YPCKLESQINCRCGKTKKSVPCGRERSARIVCLELCRITPKCHHAIKHRC
HKGDCPPCGQVCGLPNDTSKCGHICKARCHEAVRVNKPKEARPQAKKYEY
KALPHPRCEEGVIVTCIGGHEVATWPCWNSKPTSCQRSCARQLKCGNHKC
SLVCHFVPLPQDMSAQTGCANCEEGCTVPRPTGCIHACPKGCHPPPCAPC
NFVIKTKCHCGLNQLVYKCNEYYDETGSVQEIIERREKLRSCGNRCLKNY
PCGHRCTAICHTGKCPNPELCRKKVRIFCACKRLKQEIACDKHRAGQTFL
DCDSNCKAEQIRVQAAEQLQLEQKRRDEEERNRLELEKFEAKFGKRKHKE
RKTVGSGPAKTKIDWQRRAIYAVSILTVVGAIVVAFYADS*

BS04801.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:43:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-PA 840 CG15011-PA 1..840 1..840 4855 100 Plus
stc-PC 1095 CG3647-PC 375..902 75..604 875 33.3 Plus
stc-PA 1099 CG3647-PA 379..906 75..604 875 33.3 Plus
stc-PD 1102 CG3647-PD 382..909 75..604 875 33.3 Plus
stc-PB 1106 CG3647-PB 386..913 75..604 875 33.3 Plus
stc-PC 1095 CG3647-PC 369..915 214..682 586 28.6 Plus
stc-PA 1099 CG3647-PA 373..919 214..682 586 28.6 Plus
stc-PD 1102 CG3647-PD 376..922 214..682 586 28.6 Plus
stc-PC 1095 CG3647-PC 434..751 461..731 260 28.1 Plus
stc-PA 1099 CG3647-PA 438..755 461..731 260 28.1 Plus
stc-PD 1102 CG3647-PD 441..758 461..731 260 28.1 Plus
stc-PC 1095 CG3647-PC 453..673 508..740 212 24.1 Plus
stc-PA 1099 CG3647-PA 457..677 508..740 212 24.1 Plus
stc-PD 1102 CG3647-PD 460..680 508..740 212 24.1 Plus
stc-PC 1095 CG3647-PC 452..568 621..756 189 31.4 Plus
stc-PA 1099 CG3647-PA 456..572 621..756 189 31.4 Plus
stc-PD 1102 CG3647-PD 459..575 621..756 189 31.4 Plus