Clone Sequence Records
BS04831.3prime Sequence
309 bp (308 high quality bases) assembled on 2005-12-02
> BS04831.3prime
ATGGTCTAGAAAGCTTTTACTCTCTGTTTAAGTGGGCGCCAGTGTCCGTG
GACAGGCAGCCGGCACCACCACCGAAACCGTATCCCTTGGGACCGTATTT
GCGACCATGGCAGTTTTTGCAGAAAAGCTCCTTCTCGTGCTCCGTGCAGT
TGGTCGAGTCCAGGGCCTTGTTGCACATGCTGCACTTGAAGCAGGTCTTG
TGGAATTTGTAGCCTCCGGCAACGCGCTCCTCGGCAGCGTAGACCGACTT
GCCGCACGCGGGGCACTTGGGGGTTTCAACGGGAACGAAAGGCATGTCGA
CTGATAACT
BS04831.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:55:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33149-PA | 279 | Mlp60A-RA | 1..279 | 295..17 | 1395 | 100 | Minus |
CG1019-PA | 1488 | Mlp84B-RA | 93..165 | 206..134 | 190 | 90.4 | Minus |
CG1019-PB | 1488 | Mlp84B-RB | 93..165 | 206..134 | 190 | 90.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-RE | 440 | CG42309-RE | 83..361 | 295..17 | 1395 | 100 | Minus |
Mlp60A-RF | 670 | CG42309-RF | 50..328 | 295..17 | 1395 | 100 | Minus |
Mlp60A-RC | 2468 | CG42309-RC | 493..767 | 295..21 | 1375 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:07:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24075449..24075612 | 180..17 | 820 | 100 | Minus |
2R | 25286936 | 2R | 24075223..24075338 | 295..180 | 580 | 100 | Minus |
3R | 32079331 | 3R | 7115504..7115734 | 43..273 | 420 | 78.8 | Plus |
Blast to na_te.dros performed on 2015-02-01 09:07:57 has no hits.
BS04831.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:58:15 Download gff for
BS04831.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33149-PA | 1..279 | 17..295 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:22:50 Download gff for
BS04831.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33149-PA | 1..279 | 17..295 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:32:58 Download gff for
BS04831.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 73..361 | 17..304 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:58:50 Download gff for
BS04831.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RF | 40..328 | 17..304 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:58:50 Download gff for
BS04831.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24075213..24075337 | 181..304 | 97 | -> | Minus |
2R | 24075449..24075612 | 17..180 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:32:58 Download gff for
BS04831.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19962736..19962860 | 181..304 | 97 | -> | Minus |
arm_2R | 19962972..19963135 | 17..180 | 100 | | Minus |
BS04831.5prime Sequence
309 bp (308 high quality bases) assembled on 2005-12-02
> BS04831.5prime
GAAGTTATCAGTCGACATGCCTTTCGTTCCCGTTGAAACCCCCAAGTGCC
CCGCGTGCGGCAAGTCGGTCTACGCTGCCGAGGAGCGCGTTGCCGGAGGC
TACAAATTCCACAAGACCTGCTTCAAGTGCAGCATGTGCAACAAGGCCCT
GGACTCGACCAACTGCACGGAGCACGAGAAGGAGCTTTTCTGCAAAAACT
GCCATGGTCGCAAATACGGTCCCAAGGGATACGGTTTCGGTGGTGGTGCC
GGCTGCCTGTCCACGGACACTGGCGCCCACTTAAACAGAGAGTAAAAGCT
TTCTAGACC
BS04831.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:55:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33149-PA | 279 | Mlp60A-RA | 1..279 | 17..295 | 1395 | 100 | Plus |
CG1019-PA | 1488 | Mlp84B-RA | 93..165 | 106..178 | 190 | 90.4 | Plus |
CG1019-PB | 1488 | Mlp84B-RB | 93..165 | 106..178 | 190 | 90.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:21:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-RE | 440 | CG42309-RE | 83..361 | 17..295 | 1395 | 100 | Plus |
Mlp60A-RF | 670 | CG42309-RF | 50..328 | 17..295 | 1395 | 100 | Plus |
Mlp60A-RC | 2468 | CG42309-RC | 493..767 | 17..291 | 1375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:21:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24075449..24075612 | 132..295 | 820 | 100 | Plus |
2R | 25286936 | 2R | 24075223..24075338 | 17..132 | 580 | 100 | Plus |
3R | 32079331 | 3R | 7115504..7115734 | 269..39 | 420 | 78.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 01:21:28 has no hits.
BS04831.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:58:16 Download gff for
BS04831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33149-PA | 1..279 | 17..295 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:22:51 Download gff for
BS04831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33149-PA | 1..279 | 17..295 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 20:58:45 Download gff for
BS04831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 73..361 | 8..295 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:28:59 Download gff for
BS04831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RF | 40..328 | 8..295 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:28:59 Download gff for
BS04831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24075213..24075337 | 8..131 | 97 | -> | Plus |
2R | 24075449..24075612 | 132..295 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:58:45 Download gff for
BS04831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19962736..19962860 | 8..131 | 97 | -> | Plus |
arm_2R | 19962972..19963135 | 132..295 | 100 | | Plus |
BS04831.complete Sequence
311 bp (311 high quality bases) assembled on 2005-09-13
GenBank Submission: FJ635024
> BS04831.complete
GAAGTTATCAGTCGACATGCCTTTCGTTCCCGTTGAAACCCCCAAGTGCC
CCGCGTGCGGCAAGTCGGTCTACGCTGCCGAGGAGCGCGTTGCCGGAGGC
TACAAATTCCACAAGACCTGCTTCAAGTGCAGCATGTGCAACAAGGCCCT
GGACTCGACCAACTGCACGGAGCACGAGAAGGAGCTTTTCTGCAAAAACT
GCCATGGTCGCAAATACGGTCCCAAGGGATACGGTTTCGGTGGTGGTGCC
GGCTGCCTGTCCACGGACACTGGCGCCCACTTAAACAGAGAGTAAAAGCT
TTCTAGACCAT
BS04831.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:41:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-RE | 279 | CG42309-PE | 1..279 | 17..295 | 1395 | 100 | Plus |
Mlp60A-RF | 279 | CG42309-PF | 1..279 | 17..295 | 1395 | 100 | Plus |
Mlp60A-RC | 1461 | CG42309-PC | 1..275 | 17..291 | 1375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:41:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-RE | 440 | CG42309-RE | 83..361 | 17..295 | 1395 | 100 | Plus |
Mlp60A-RF | 670 | CG42309-RF | 50..328 | 17..295 | 1395 | 100 | Plus |
Mlp60A-RC | 2468 | CG42309-RC | 493..767 | 17..291 | 1375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:41:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24075449..24075612 | 132..295 | 820 | 100 | Plus |
2R | 25286936 | 2R | 24075223..24075338 | 17..132 | 580 | 100 | Plus |
3R | 32079331 | 3R | 7115504..7115734 | 269..39 | 420 | 78.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:41:18 has no hits.
BS04831.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:50:04 Download gff for
BS04831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 1..279 | 17..295 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:38:42 Download gff for
BS04831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 72..360 | 8..295 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:04 Download gff for
BS04831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 83..359 | 17..293 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:50:05 Download gff for
BS04831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 72..360 | 8..295 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:23 Download gff for
BS04831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RF | 50..326 | 17..293 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:23 Download gff for
BS04831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24075223..24075337 | 17..131 | 100 | -> | Plus |
2R | 24075449..24075610 | 132..293 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:04 Download gff for
BS04831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19962972..19963133 | 132..293 | 100 | | Plus |
arm_2R | 19962746..19962860 | 17..131 | 100 | -> | Plus |
BS04831.pep Sequence
Translation from 16 to 294
> BS04831.pep
MPFVPVETPKCPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKALDSTNC
TEHEKELFCKNCHGRKYGPKGYGFGGGAGCLSTDTGAHLNRE*
BS04831.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:46:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-PE | 92 | CG33149-PA | 1..92 | 1..92 | 530 | 100 | Plus |
Mlp60A-PF | 92 | CG42309-PF | 1..92 | 1..92 | 530 | 100 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 1..92 | 1..92 | 530 | 100 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 1..92 | 1..92 | 530 | 100 | Plus |
Mlp84B-PC | 495 | CG1019-PC | 4..93 | 3..92 | 410 | 76.7 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 213..287 | 11..84 | 206 | 48 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 213..287 | 11..84 | 206 | 48 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 96..174 | 2..76 | 203 | 45.6 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 96..174 | 2..76 | 203 | 45.6 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 412..484 | 11..82 | 180 | 45.2 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 412..484 | 11..82 | 180 | 45.2 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 299..390 | 2..84 | 173 | 35.9 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 299..390 | 2..84 | 173 | 35.9 | Plus |