Clone BS04932 Report

Search the DGRC for BS04932

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:49
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptMnn1-RB
Protein status:BS04932.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS04932.3prime Sequence

872 bp (828 high quality bases) assembled on 2005-12-02

> BS04932.3prime
ATGGTCTAGAAAGCTTTCAACTGGACTGAAGTGTTAAATAAAATTTATAA
TGTGAAGTAATGAGTATGCTTACCTCCTCCTTTGTGGCCATCCTATTGTT
ATTGCCTTCCATTGCCTCTGATCCTGCAGCTTCCTTCGACTCCTTAGCTT
CCTTTGCTTCCTGTTCCGCCCTCGCCAGTTCCGCCTTCGCCTGCTCCGCC
TCCAGATCCTCGGGCAACTTGATGACCACCTGGGACCTAATGTCGTAATC
GAACTTGGTGATATTATTCACCAGTGGTTTGGCCCAACCAATGTGTAGAA
TGGGAGTCAAGCTATCCTCCTCCCATTGGCAGATGCCGTCGTAGAATCGC
AGCAAATTGGCGAAAACCTCAGAATCTCGTAGAATACTTCTCGCCGAATG
ACCAGAACTTTCTGTTTTCATCACGTACGGTATGAGCTCGTTGGCAATGT
CCAATAGCTCCTTGTAGATCTCCTCGTCATCACGACACTGATACGTATAC
AAACGAATAACGTCCGCCGCATTTGCCCATGCGGCAAAGGCGTCGCGGTA
TTTGAGCAATCGATTGTAGTAGTTCCCCTGGTAGGTATACGGATATACGT
GATGGTTCCGATAGTGGGTCCTCGCCGACTCTATAGCCTCGCGATATAAC
TGCTCGCAACTGATGCTGGGATGCGTGCGATGAATCTCCTCCAGCTCGCC
TAGGGTGCCCAGGGCCATCGGATAGCGTTTGAGGTGGCCCAAATCGTAGA
GTAGCCACAGCAACTGCTGTTGAAGCTCTGCCACCTCCACGCAGTCACTG
TTCGAGGTCAATGAAATATTCAGAGCGGCACAGATGGCCGCCACTTCCAT
GCCACGCTCGCAAAACACCGCC

BS04932.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:55:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG13778-PB 1593 Mnn1-RB 738..1593 872..17 4255 99.8 Minus
CG13778-PC 2292 Mnn1-RC 738..1536 872..74 3970 99.8 Minus
CG13778-PA 2292 Mnn1-RA 738..1536 872..74 3970 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:23:05
Subject Length Description Subject Range Query Range Score Percent Strand
Mnn1-RB 1927 CG13778-RB 1033..1890 872..15 4275 99.9 Minus
Mnn1-RA 4275 CG13778-RA 1777..2575 872..74 3980 99.9 Minus
Mnn1-RC 5196 CG13778-RC 1777..2575 872..74 3980 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7058400..7059257 872..15 4275 99.9 Minus
Blast to na_te.dros performed on 2015-02-10 18:23:04 has no hits.

BS04932.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:58:55 Download gff for BS04932.3prime
Subject Subject Range Query Range Percent Splice Strand
Mnn1-PB 738..1593 17..872 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:23:38 Download gff for BS04932.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13778-PB 738..1593 17..872 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:00:09 Download gff for BS04932.3prime
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RB 1033..1890 15..872 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:43:55 Download gff for BS04932.3prime
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RB 1033..1890 15..872 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:43:55 Download gff for BS04932.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 7058400..7059257 15..872 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:00:09 Download gff for BS04932.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7058400..7059257 15..872 99   Minus

BS04932.5prime Sequence

881 bp (835 high quality bases) assembled on 2005-12-02

> BS04932.5prime
GAAGTTATCAGTCGACATGTCCACGATTACCAGAAGCGCTAGCGCAAGTC
CTATGGCGCTGAACGGCGTCATCGATGCCAGCCTGTTCCCCCTAAAGTCC
ACGGCCGATGTTATCAATCTGTTCCGTCGCGCTCTAACCTCTGGAATCGA
GCCTGATCTCACCCTGCTCTCCATTGTCGTTGGATACATCGAGCTGTCTT
TGACGACGGGAGAGGCTGCTGCGCAGGCCGCTCAAGCCGCCGCGGCCGCA
GTCGCAGCAGGTGACATTAGTCAGGCGACGACAGGTGGAAATGACATCAT
CATGGGCAACAGCGTCCCGTTTCCAGTTGTTACCCACGAACTGATCGCCG
GGCTGTATAAGAAGTTCCAGACGATCCTGTCGGTGGTCGAGAAGCCCAAG
CCCCACCGCCAAGCCACCCGCGAGGTGATCAAGAAGGTGTCGGATGTGAT
CTGGAACTCGCTGATCCGCAGCAGCTACAAGGATCGGGCTCACTTGCAAA
ACCTCTACAGCTATCTGTCCGGCAACAAGTTGGACTGCTTCGGCGTTGCT
CTGGCTGTGGTGGCGGGTTGCCAGTTGCTTGGCTACAAGGACGTGCGACT
GGCCATCTCCGAGGATCATGCCTGGGTGGTATTTGGCCAAAAGCGCGTGG
AAACAATCGAAGTGACATGGCACGGCAAAGGAAGCGAGGATAAGCGGGGG
CAGGATATTCGTCCCGGGATCGAATCCGGATCCTGGCTCTACTTGGGTGG
CCTGGCGGTGGTTTGCGAGCGTGGCATGGAAGTGGCGGCCATCTGTGCCG
CTCTGAATATTTCATTGACCTCGAACAGTGACTGCGTGGAGGTGGCAGAG
CTTCAACAGCAGTTGCTGTGGCTACTCTACA

BS04932.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG13778-PC 2292 Mnn1-RC 1..864 17..880 4320 100 Plus
CG13778-PB 1593 Mnn1-RB 1..864 17..880 4320 100 Plus
CG13778-PA 2292 Mnn1-RA 1..864 17..880 4320 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
Mnn1-RA 4275 CG13778-RA 1039..1903 16..880 4325 100 Plus
Mnn1-RB 1927 CG13778-RB 295..1159 16..880 4325 100 Plus
Mnn1-RC 5196 CG13778-RC 1039..1903 16..880 4325 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7057861..7058327 282..748 2335 100 Plus
2L 23513712 2L 7057406..7057677 16..287 1360 100 Plus
2L 23513712 2L 7058392..7058526 746..880 675 100 Plus
Blast to na_te.dros performed on 2015-02-11 16:45:19 has no hits.

BS04932.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:58:56 Download gff for BS04932.5prime
Subject Subject Range Query Range Percent Splice Strand
Mnn1-PA 1..864 17..880 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:23:39 Download gff for BS04932.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13778-PA 1..864 17..880 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:41:16 Download gff for BS04932.5prime
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RC 1039..1903 16..880 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:59:53 Download gff for BS04932.5prime
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RC 1039..1903 16..880 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:59:53 Download gff for BS04932.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7057864..7058325 285..746 100 -> Plus
2L 7057406..7057674 16..284 100 -> Plus
2L 7058393..7058526 747..880 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:41:16 Download gff for BS04932.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7057406..7057674 16..284 100 -> Plus
arm_2L 7057864..7058325 285..746 100 -> Plus
arm_2L 7058393..7058526 747..880 100   Plus

BS04932.complete Sequence

1625 bp (1625 high quality bases) assembled on 2005-09-13

GenBank Submission: FJ635027

> BS04932.complete
GAAGTTATCAGTCGACATGTCCACGATTACCAGAAGCGCTAGCGCAAGTC
CTATGGCGCTGAACGGCGTCATCGATGCCAGCCTGTTCCCCCTAAAGTCC
ACGGCCGATGTTATCAATCTGTTCCGTCGCGCTCTAACCTCTGGAATCGA
GCCTGATCTCACCCTGCTCTCCATTGTCGTTGGATACATCGAGCTGTCTT
TGACGACGGGAGAGGCTGCTGCGCAGGCCGCTCAAGCCGCCGCGGCCGCA
GTCGCAGCAGGTGACATTAGTCAGGCGACGACAGGTGGAAATGACATCAT
CATGGGCAACAGCGTCCCGTTTCCAGTTGTTACCCACGAACTGATCGCCG
GGCTGTATAAGAAGTTCCAGACGATCCTGTCGGTGGTCGAGAAGCCCAAG
CCCCACCGCCAAGCCACCCGCGAGGTGATCAAGAAGGTGTCGGATGTGAT
CTGGAACTCGCTGATCCGCAGCAGCTACAAGGATCGGGCTCACTTGCAAA
ACCTCTACAGCTATCTGTCCGGCAACAAGTTGGACTGCTTCGGCGTTGCT
CTGGCTGTGGTGGCGGGTTGCCAGTTGCTTGGCTACAAGGACGTGCGACT
GGCCATCTCCGAGGATCATGCCTGGGTGGTATTTGGCCAAAAGCGCGTGG
AAACAATCGAAGTGACATGGCACGGCAAAGGAAGCGAGGATAAGCGGGGG
CAGGATATTCGTCCCGGGATCGAATCCGGATCCTGGCTCTACTTGGGTGG
CCTGGCGGTGGTTTGCGAGCGTGGCATGGAAGTGGCGGCCATCTGTGCCG
CTCTGAATATTTCATTGACCTCGAACAGTGACTGCGTGGAGGTGGCAGAG
CTTCAACAGCAGTTGCTGTGGCTACTCTACGATTTGGGCCACCTCAAACG
CTATCCGATGGCCCTGGGCACCCTAGGCGAGCTGGAGGAGATTCATCGCA
CGCATCCCAGCATCAGTTGCGAGCAGTTATATCGCGAGGCTATAGAGTCG
GCGAGGACCCACTATCGGAACCATCACGTATATCCGTATACCTACCAGGG
GAACTACTACAATCGATTGCTCAAATACCGCGACGCCTTTGCCGCATGGG
CAAATGCGGCGGACGTTATTCGTTTGTATACGTATCAGTGTCGTGATGAC
GAGGAGATCTACAAGGAGCTATTGGACATTGCCAACGAGCTCATACCGTA
CGTGATGAAAACAGAAAGTTCTGGTCATTCGGCGAGAAGTATTCTACGAG
ATTCTGAGGTTTTCGCCAATTTGCTGCGATTCTACGACGGCATCTGCCAA
TGGGAGGAGGATAGCTTGACTCCCATTCTACACATTGGTTGGGCCAAACC
ACTGGTGAATAATATCACCAAGTTCGATTACGACATTAGGTCCCAGGTGG
TCATCAAGTTGCCCGAGGATCTGGAGGCGGAGCAGGCGAAGGCGGAACTG
GCGAGGGCGGAACAGGAAGCAAAGGAAGCTAAGGAGTCGAAGGAAGCTGC
AGGATCAGAGGCAATGGAAGGCAATAACAATAGGATGGCCACAAAGGAGG
AGGTAAGCATACTCATTACTTCACATTATAAATTTTATTTAACACTTCAG
TCCAGTTGAAAGCTTTCTAGACCAT

BS04932.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:55:15
Subject Length Description Subject Range Query Range Score Percent Strand
Mnn1-RB 1593 CG13778-PB 1..1593 17..1609 7965 100 Plus
Mnn1-RA 2292 CG13778-PA 1..1536 17..1552 7680 100 Plus
Mnn1-RC 2292 CG13778-PC 1..1536 17..1552 7680 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:55:16
Subject Length Description Subject Range Query Range Score Percent Strand
Mnn1-RB 1927 CG13778-RB 295..1890 16..1611 7980 100 Plus
Mnn1-RA 4275 CG13778-RA 1039..2575 16..1552 7685 100 Plus
Mnn1-RC 5196 CG13778-RC 1039..2575 16..1552 7685 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:55:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7058392..7059257 746..1611 4330 100 Plus
2L 23513712 2L 7057861..7058327 282..748 2335 100 Plus
2L 23513712 2L 7057406..7057677 16..287 1360 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:55:15 has no hits.

BS04932.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:31:08 Download gff for BS04932.complete
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RB 1..1593 17..1609 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:15:03 Download gff for BS04932.complete
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RB 290..1885 16..1611 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:57 Download gff for BS04932.complete
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RB 296..1887 17..1608 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:31:08 Download gff for BS04932.complete
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RB 290..1885 16..1611 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:03 Download gff for BS04932.complete
Subject Subject Range Query Range Percent Splice Strand
Mnn1-RB 296..1887 17..1608 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:03 Download gff for BS04932.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7057407..7057674 17..284 100 -> Plus
2L 7057864..7058325 285..746 100 -> Plus
2L 7058393..7059254 747..1608 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:57 Download gff for BS04932.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7057407..7057674 17..284 100 -> Plus
arm_2L 7057864..7058325 285..746 100 -> Plus
arm_2L 7058393..7059254 747..1608 100   Plus

BS04932.pep Sequence

Translation from 16 to 1608

> BS04932.pep
MSTITRSASASPMALNGVIDASLFPLKSTADVINLFRRALTSGIEPDLTL
LSIVVGYIELSLTTGEAAAQAAQAAAAAVAAGDISQATTGGNDIIMGNSV
PFPVVTHELIAGLYKKFQTILSVVEKPKPHRQATREVIKKVSDVIWNSLI
RSSYKDRAHLQNLYSYLSGNKLDCFGVALAVVAGCQLLGYKDVRLAISED
HAWVVFGQKRVETIEVTWHGKGSEDKRGQDIRPGIESGSWLYLGGLAVVC
ERGMEVAAICAALNISLTSNSDCVEVAELQQQLLWLLYDLGHLKRYPMAL
GTLGELEEIHRTHPSISCEQLYREAIESARTHYRNHHVYPYTYQGNYYNR
LLKYRDAFAAWANAADVIRLYTYQCRDDEEIYKELLDIANELIPYVMKTE
SSGHSARSILRDSEVFANLLRFYDGICQWEEDSLTPILHIGWAKPLVNNI
TKFDYDIRSQVVIKLPEDLEAEQAKAELARAEQEAKEAKESKEAAGSEAM
EGNNNRMATKEEVSILITSHYKFYLTLQSS*

BS04932.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:22:25
Subject Length Description Subject Range Query Range Score Percent Strand
Mnn1-PB 530 CG13778-PB 1..530 1..530 2715 100 Plus
Mnn1-PA 763 CG13778-PA 1..514 1..514 2629 99.8 Plus
Mnn1-PC 763 CG13778-PC 1..514 1..514 2629 99.8 Plus