Clone BS05015 Report

Search the DGRC for BS05015

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:50
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG8745-RA
Protein status:BS05015.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05015.3prime Sequence

925 bp (826 high quality bases) assembled on 2005-12-02

> BS05015.3prime
ATGGTCTAGAAAGCTTTCAGACGGACTTGATAAGGCGATCCTGCCGCTCG
AAGAGTTTCGTCTTGTTGGCCAGTGTCTCAGTGGCTGTTGCAATGACACC
ACTGGTAGCAGCCATGGCGGCTGATGTGGCACTGGCCAGCCGCTCCTGCA
TCACGGCGGTCAAGCACTCCCGGAATCCCAGCAGGAATTCATCTGCATTC
TCCCGGTTGAAGCACATGGGTGGCTTTAGCTTGATCACGTTATCGTTGGG
ACCGTCGGAGGAAACGAGCACCCGGTGGAGCTGCTTCATCCGGTTGACCA
CCCAGTGGGCAGCCTTCTTGTCGGGAATACGCTCCTTCCGATCCTGGACC
AGCTCTATGCCCACGAAGAGTCCAGCGCCTCGCACATCGCCAATGCACTC
GAATTCTTGCTTCAGACGATTGCACTCCTCCAAAAGATAATCGCCCAAAA
CAAGAGCCTTCTGTTGCAGACCCTCCTCCTCGATAACGCGCATCACTGCA
TTGGCGATCGCACAGGAGACCGGATTGCCGCCATAAGTGTTAAAGTAAGC
AACTCCGGTGGCATGGAAGGCCTGAGCGATTTCCGGAGTGGTAACTACCG
CACCCACCGGATGTCCATTGCCCATGGGCTTGGCCACACACACAATATCG
GGGATTACGTTTTGGGTCTCGAATGCCCAATAGTGGCTGCCCACGCGTCC
AAATCCCACCTGAACCTCGTCAGCAATGCAAACGCCTCCGGCAGAGCGTA
CCGCATCGTAGACTGCCTGGAAGTATCCGGCTGGTGGCAAAATCTGTCCA
CCGCAACTCTGCAGACTCTCGGCAATGAAGGCGGCGACGCCCTGTCCTTT
GGCCAACTGCTTCTGGCAGATCTCCTCGATGGGCTGAGCATACAGGGCAC
CCATGTCAGCATCCGGATACATCTT

BS05015.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG8745-PA 1485 CG8745-RA 577..1485 925..17 4545 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8745-RA 2429 CG8745-RA 791..1699 925..17 4545 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13860757..13861665 17..925 4545 100 Plus
Blast to na_te.dros performed on 2015-02-02 19:03:45 has no hits.

BS05015.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:59:38 Download gff for BS05015.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8745-PA 577..1485 17..925 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:24:29 Download gff for BS05015.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8745-PA 577..1485 17..925 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:14:14 Download gff for BS05015.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 791..1702 13..925 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:56:50 Download gff for BS05015.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 791..1702 13..925 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:56:50 Download gff for BS05015.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 13860754..13861665 13..925 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:14:14 Download gff for BS05015.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13853854..13854765 13..925 99   Plus

BS05015.5prime Sequence

862 bp (803 high quality bases) assembled on 2005-11-29

> BS05015.5prime
GAAGTTATCAGTCGACATGCCTTTCGCCCACGAGCAACTGAATCTGGTGG
CCAGCGAGCAGCTGAGCAAAACGGAGACCATCAAGCTGCGCAACCAGCAC
ATCGGACAAGCCTGCCAGCTCTTCTATCGCTCTGATCCCCTGAAAATTGT
GCGCGGTCAAGGTCAATATATGTTTGATGAGGAGGGCACCCGGTATCTGG
ACTGCATCAACAATGTAGCCCACGTGGGTCATTGCCATCCGGAGGTGGTG
CGAGCTGGAGCCCTGCAGATGGCCACCATCTCGACGAACAACCGCTTCCT
CCACGACGAACTGGTCCAGTGTGCTCGCACGTTGACCAGCAAAATGCCGG
AGCCTCTGTCCGTTTGCTTCTTCGTCAATTCCGGATCCGAGGCCAATGAC
CTGGCCCTTCGATTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCAC
TCTCGACCATGCCTATCATGGTCATCTGCAGTCGGTGATGGAGGTGTCTC
CATACAAATTTAACCAGCCCGGCGGCGAGGCCAAGCCCGACTACGTGCAT
GTGGCGCCGTGCCCGGACGTTTATGGCGGAAAGTTTACGGACAAGATGTA
TCCGGATGCTGACATGGGTGCCCTGTATGCTCAGCCCATCGAGGAGATCT
GCCAGAAGCAGTTGGCCAAAGGACAGGGCGTCGCCGCCTTCATTGCCGAG
AGTCTGCAGAGTTGCGGTGGACAGATTTTGCCACCAGCCGGATACTTCCA
GGCAGTCTACGATGCGGTACGCTCTGCCGGAGGCGTTTGCATTGCTGACG
AGGTTCAGGTGGGATTTGGACGCGTGGGCAGCCACTATTGGGCATTCGAG
ACCCAAACGTAA

BS05015.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:56:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG8745-PA 1485 CG8745-RA 1..841 17..857 4205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG8745-RA 2429 CG8745-RA 215..1061 17..862 4210 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 04:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13861401..13861798 857..460 1990 100 Minus
3L 28110227 3L 13861919..13862154 459..224 1180 100 Minus
3L 28110227 3L 13865317..13865436 224..105 600 100 Minus
3L 28110227 3L 13866603..13866691 105..17 445 100 Minus
Blast to na_te.dros performed on 2015-02-04 04:27:09 has no hits.

BS05015.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:59:39 Download gff for BS05015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8745-PA 1..845 17..860 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:24:31 Download gff for BS05015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8745-PA 1..845 17..860 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:11:36 Download gff for BS05015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 215..1061 17..862 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:52:04 Download gff for BS05015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 215..1061 17..862 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:52:04 Download gff for BS05015.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 13861395..13861798 460..862 99 <- Minus
3L 13861919..13862153 225..459 100 <- Minus
3L 13865317..13865435 106..224 100 <- Minus
3L 13866603..13866691 17..105 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:11:36 Download gff for BS05015.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13854495..13854898 460..862 99 <- Minus
arm_3L 13855019..13855253 225..459 100 <- Minus
arm_3L 13858417..13858535 106..224 100 <- Minus
arm_3L 13859703..13859791 17..105 100   Minus

BS05015.complete Sequence

1517 bp (1517 high quality bases) assembled on 2005-09-12

GenBank Submission: FJ635037

> BS05015.complete
GAAGTTATCAGTCGACATGCCTTTCGCCCACGAGCAACTGAATCTGGTGG
CCAGCGAGCAGCTGAGCAAAACGGAGACCATCAAGCTGCGCAACCAGCAC
ATCGGACAAGCCTGCCAGCTCTTCTATCGCTCTGATCCCCTGAAAATTGT
GCGCGGTCAAGGTCAATATATGTTTGATGAGGAGGGCACCCGGTATCTGG
ACTGCATCAACAATGTAGCCCACGTGGGTCATTGCCATCCGGAGGTGGTG
CGAGCTGGAGCCCTGCAGATGGCCACCATCTCGACGAACAACCGCTTCCT
CCACGACGAACTGGTCCAGTGTGCTCGCACGTTGACCAGCAAAATGCCGG
AGCCTCTGTCCGTTTGCTTCTTCGTCAATTCCGGATCCGAGGCCAATGAC
CTGGCCCTTCGATTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCAC
TCTCGACCATGCCTATCATGGTCATCTGCAGTCGGTGATGGAGGTGTCTC
CATACAAATTTAACCAGCCCGGCGGCGAGGCCAAGCCCGACTACGTGCAT
GTGGCGCCGTGCCCGGACGTTTATGGCGGAAAGTTTACGGACAAGATGTA
TCCGGATGCTGACATGGGTGCCCTGTATGCTCAGCCCATCGAGGAGATCT
GCCAGAAGCAGTTGGCCAAAGGACAGGGCGTCGCCGCCTTCATTGCCGAG
AGTCTGCAGAGTTGCGGTGGACAGATTTTGCCACCAGCCGGATACTTCCA
GGCAGTCTACGATGCGGTACGCTCTGCCGGAGGCGTTTGCATTGCTGACG
AGGTTCAGGTGGGATTTGGACGCGTGGGCAGCCACTATTGGGCATTCGAG
ACCCAAAACGTAATCCCCGATATTGTGTGTGTGGCCAAGCCCATGGGCAA
TGGACATCCGGTGGGTGCGGTAGTTACCACTCCGGAAATCGCTCAGGCCT
TCCATGCCACCGGAGTTGCTTACTTTAACACTTATGGCGGCAATCCGGTC
TCCTGTGCGATCGCCAATGCAGTGATGCGCGTTATCGAGGAGGAGGGTCT
GCAACAGAAGGCTCTTGTTTTGGGCGATTATCTTTTGGAGGAGTGCAATC
GTCTGAAGCAAGAATTCGAGTGCATTGGCGATGTGCGAGGCGCTGGACTC
TTCGTGGGCATAGAGCTGGTCCAGGATCGGAAGGAGCGTATTCCCGACAA
GAAGGCTGCCCACTGGGTGGTCAACCGGATGAAGCAGCTCCACCGGGTGC
TCGTTTCCTCCGACGGTCCCAACGATAACGTGATCAAGCTAAAGCCACCC
ATGTGCTTCAACCGGGAGAATGCAGATGAATTCCTGCTGGGATTCCGGGA
GTGCTTGACCGCCGTGATGCAGGAGCGGCTGGCCAGTGCCACATCAGCCG
CCATGGCTGCTACCAGTGGTGTCATTGCAACAGCCACTGAGACACTGGCC
AACAAGACGAAACTCTTCGAGCGGCAGGATCGCCTTATCAAGTCCGTCTG
AAAGCTTTCTAGACCAT

BS05015.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG8745-RA 1485 CG8745-PA 1..1485 17..1501 7425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG8745-RA 2429 CG8745-RA 215..1699 17..1501 7425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13860757..13861798 1501..460 5210 100 Minus
3L 28110227 3L 13861919..13862154 459..224 1180 100 Minus
3L 28110227 3L 13865317..13865436 224..105 600 100 Minus
3L 28110227 3L 13866603..13866691 105..17 445 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:27:25 has no hits.

BS05015.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:33:18 Download gff for BS05015.complete
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 1..1485 17..1501 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:17:43 Download gff for BS05015.complete
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 195..1682 17..1505 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:58:45 Download gff for BS05015.complete
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 215..1698 17..1500 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:33:18 Download gff for BS05015.complete
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 195..1682 17..1505 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:01:40 Download gff for BS05015.complete
Subject Subject Range Query Range Percent Splice Strand
CG8745-RA 215..1698 17..1500 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:01:40 Download gff for BS05015.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13860758..13861798 460..1500 100 <- Minus
3L 13861919..13862153 225..459 100 <- Minus
3L 13865317..13865435 106..224 100 <- Minus
3L 13866603..13866691 17..105 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:58:45 Download gff for BS05015.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13853858..13854898 460..1500 100 <- Minus
arm_3L 13855019..13855253 225..459 100 <- Minus
arm_3L 13858417..13858535 106..224 100 <- Minus
arm_3L 13859703..13859791 17..105 100   Minus

BS05015.pep Sequence

Translation from 16 to 1500

> BS05015.pep
MPFAHEQLNLVASEQLSKTETIKLRNQHIGQACQLFYRSDPLKIVRGQGQ
YMFDEEGTRYLDCINNVAHVGHCHPEVVRAGALQMATISTNNRFLHDELV
QCARTLTSKMPEPLSVCFFVNSGSEANDLALRLARNFTKRQDVITLDHAY
HGHLQSVMEVSPYKFNQPGGEAKPDYVHVAPCPDVYGGKFTDKMYPDADM
GALYAQPIEEICQKQLAKGQGVAAFIAESLQSCGGQILPPAGYFQAVYDA
VRSAGGVCIADEVQVGFGRVGSHYWAFETQNVIPDIVCVAKPMGNGHPVG
AVVTTPEIAQAFHATGVAYFNTYGGNPVSCAIANAVMRVIEEEGLQQKAL
VLGDYLLEECNRLKQEFECIGDVRGAGLFVGIELVQDRKERIPDKKAAHW
VVNRMKQLHRVLVSSDGPNDNVIKLKPPMCFNRENADEFLLGFRECLTAV
MQERLASATSAAMAATSGVIATATETLANKTKLFERQDRLIKSV*

BS05015.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG8745-PA 494 CG8745-PA 1..494 1..494 2590 100 Plus
CG11241-PA 508 CG11241-PA 52..489 12..436 736 39.6 Plus
CG11241-PC 518 CG11241-PC 52..516 12..463 731 37.9 Plus
CG11241-PB 518 CG11241-PB 52..516 12..463 731 37.9 Plus
Oat-PA 431 CG8782-PA 49..422 37..437 297 25.9 Plus