Clone Sequence Records
BS05043.3prime Sequence
921 bp (811 high quality bases) assembled on 2005-12-02
> BS05043.3prime
ATGGTCTAGAAAGCTTTTAAGGTAAAAACTGCATGCTGGGAATAAAAGTC
AATGCCTTGGAAGTGGGGCTTTTGGGATTCCCCAGATCTTTGGCGATTCC
CTGCACGCGGGCCACCACGTCACTGCGCTGGATATCGCCCCGGTCCAACA
TCCTTTTAAATAGAGTATACAATTGCCTGGCCGCCGAAACCTGTGACAAG
GCATGCAGCTCCACCAGCAGATTCTCGGAATATCCCTCGTACTTGCTCAG
ACTCGCCGCCTTAGCATCGCGCTTTAGCAGATCGTAAACCAGCAGGAAAT
CCACATAGGGCTTAGTGGGAGGAACTCTCTTTTTGCCTGCGATCGAGGCG
GTGCTCCATCGATCCATCGCGGACTCAGAACCGAAAGCGGCCCTTCCGTA
GTTATCGTCGTAGAGGCGCAAAAAGTTATCCAGTGACTCCACATCGTTGG
TAAAGTCGTAGCGCTCGCTTTGAATATCACGGATCAAAGACAAAGGCAGG
GTATCAAAGTCGCTATCATCTTTGATTTCTGCAAATAGATCGTTGCCCTC
AAGGGACTTTTCCGGCGGCGCAGTTGGTGCAAAAATTGCCGGACGGTGCG
GCACAGTGGGTGGCGATGTGGGTCTCTCGGTTGTGGATGATCTCTTCGGC
GTTTCCCACCAACTTGGCGGCTGCCACCAGCCCATGCCACCAGATCCAGA
CGCACCTGCTCCAATCGGTCGCCTTGTGGTAGTGGTTCTCATCCTCGTGG
GCAACGGTGTGGATGGGCGCGGATTTGCAGTGGTGGATTCCATACCTTCT
TCATCCGCACTGAAAGGAGGCTCCACTGTTGTGCTTGATAGTGGCTCGTA
CTGCAGCAGGTCAATATAGTATGCCAAGGGCTGCATGGAGGCGGGCAGAT
AGCTAGTCAGTAGGTTAGCCG
BS05043.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:56:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2723-PA | 978 | ImpE3-RA | 74..978 | 921..17 | 4500 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:23:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 1094 | CG2723-RB | 139..1043 | 921..17 | 4510 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:23:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8028504..8029408 | 17..921 | 4510 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:23:14 has no hits.
BS05043.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:00:21 Download gff for
BS05043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-PA | 74..978 | 17..921 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:25:29 Download gff for
BS05043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2723-PA | 74..978 | 17..921 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:55:52 Download gff for
BS05043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 139..1051 | 6..921 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:54:31 Download gff for
BS05043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 139..1051 | 6..921 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:54:31 Download gff for
BS05043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8028496..8029408 | 6..921 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:55:52 Download gff for
BS05043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3854218..3855130 | 6..921 | 99 | | Plus |
BS05043.5prime Sequence
914 bp (869 high quality bases) assembled on 2005-11-29
> BS05043.5prime
GAAGTTATCAGTCGACATGCGCAGTGGGCTAACGGTTCGTCCAATGCTGG
TGGTGCTTCTAGTGGGTCACCTAGTGGATCCAGTGGCGCCGGCTAACCTA
CTGACTAGCTATCTGCCCGCCTCCATGCAGGCCTTGGCATACTATATTGA
CCTGCTGCAGTACGAGCCACTATCAAGCACAACAGTGGAGCCTCCTTTCA
GTGCGGATGAAGAAGGTATGGAATCCACCACTGCAAATCCGCGCCCATCC
ACACCGTTGCCCACGAGGATGAGAACCACTACCACAAGGCGACCGATTGG
AGCAGGTGCGTCTGGATCTGGTGGCATGGGCTGGTGGCAGCCGCCAAGTT
GGTGGGAAACGCCGAAGAGATCATCCACAACCGAGAGACCCACATCGCCA
CCCACTGTGCCGCACCGTCCGGCAATTTTTGCACCAACTGCGCCGCCGGA
AAAGTCCCTTGAGGGCAACGATCTATTTGCAGAAATCAAAGATGATAGCG
ACTTTGATACCCTGCCTTTGTCTTTGATCCGTGATATTCAAAGCGAGCGC
TACGACTTTACCAACGATGTGGAGTCACTGGATAACTTTTTGCGCCTCTA
CGACGATAACTACGGAAGGGCCGCTTTCGGTTCTGAGTCCGCGATGGATC
GATGGAGCACCGCCTCGATCGCAGGCAAAAAGAGAGTTCCTCCCACTAAG
CCCTATGTGGATTTCCTGCTGGTTTACGATCTGCTAAAGCGCGATGCTAA
GGCGGCGAGTCTGAGCAAGTACGAGGGATATTCCGAGAATCTGCTGGTGG
AGCTGCATGCCTTGTCACAGGTTTCGGCGGCCAGGCAATTGTATACTCTA
TTTAAAAGGATGTTGGACCGGGGCGATATCCAGCGCAGTGACGTGGTGGC
CCGCGTGCAAGGAA
BS05043.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:56:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2723-PA | 978 | ImpE3-RA | 1..893 | 17..909 | 4465 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:29:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 1094 | CG2723-RB | 66..963 | 17..914 | 4475 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8028584..8029481 | 914..17 | 4475 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:29:43 has no hits.
BS05043.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:00:23 Download gff for
BS05043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-PA | 1..895 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:25:30 Download gff for
BS05043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2723-PA | 1..895 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:37:08 Download gff for
BS05043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 63..963 | 14..914 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:02:57 Download gff for
BS05043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 63..963 | 14..914 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:02:57 Download gff for
BS05043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8028584..8029484 | 14..914 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:37:08 Download gff for
BS05043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3854306..3855206 | 14..914 | 99 | | Minus |
BS05043.complete Sequence
1010 bp (1010 high quality bases) assembled on 2005-09-12
GenBank Submission: FJ635047
> BS05043.complete
GAAGTTATCAGTCGACATGCGCAGTGGGCTAACGGTTCGTCCAATGCTGG
TGGTGCTTCTAGTGGGTCACCTAGTGGATCCAGTGGCGCCGGCTAACCTA
CTGACTAGCTATCTGCCCGCCTCCATGCAGGCCTTGGCATACTATATTGA
CCTGCTGCAGTACGAGCCACTATCAAGCACAACAGTGGAGCCTCCTTTCA
GTGCGGATGAAGAAGGTATGGAATCCACCACTGCAAATCCGCGCCCATCC
ACACCGTTGCCCACGAGGATGAGAACCACTACCACAAGGCGACCGATTGG
AGCAGGTGCGTCTGGATCTGGTGGCATGGGCTGGTGGCAGCCGCCAAGTT
GGTGGGAAACGCCGAAGAGATCATCCACAACCGAGAGACCCACATCGCCA
CCCACTGTGCCGCACCGTCCGGCAATTTTTGCACCAACTGCGCCGCCGGA
AAAGTCCCTTGAGGGCAACGATCTATTTGCAGAAATCAAAGATGATAGCG
ACTTTGATACCCTGCCTTTGTCTTTGATCCGTGATATTCAAAGCGAGCGC
TACGACTTTACCAACGATGTGGAGTCACTGGATAACTTTTTGCGCCTCTA
CGACGATAACTACGGAAGGGCCGCTTTCGGTTCTGAGTCCGCGATGGATC
GATGGAGCACCGCCTCGATCGCAGGCAAAAAGAGAGTTCCTCCCACTAAG
CCCTATGTGGATTTCCTGCTGGTTTACGATCTGCTAAAGCGCGATGCTAA
GGCGGCGAGTCTGAGCAAGTACGAGGGATATTCCGAGAATCTGCTGGTGG
AGCTGCATGCCTTGTCACAGGTTTCGGCGGCCAGGCAATTGTATACTCTA
TTTAAAAGGATGTTGGACCGGGGCGATATCCAGCGCAGTGACGTGGTGGC
CCGCGTGCAGGGAATCGCCAAAGATCTGGGGAATCCCAAAAGCCCCACTT
CCAAGGCATTGACTTTTATTCCCAGCATGCAGTTTTTACCTTAAAAGCTT
TCTAGACCAT
BS05043.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:02:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 978 | CG2723-PB | 1..978 | 17..994 | 4890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:02:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 1094 | CG2723-RB | 66..1043 | 17..994 | 4890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:02:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8028504..8029481 | 994..17 | 4890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:02:51 has no hits.
BS05043.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:33:15 Download gff for
BS05043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RA | 1..978 | 17..994 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:17:41 Download gff for
BS05043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RA | 962..1950 | 14..1005 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:25 Download gff for
BS05043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 66..1041 | 17..992 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:33:15 Download gff for
BS05043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RA | 962..1950 | 14..1005 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:13:28 Download gff for
BS05043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 66..1041 | 17..992 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:13:28 Download gff for
BS05043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8028506..8029481 | 17..992 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:25 Download gff for
BS05043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3854228..3855203 | 17..992 | 100 | | Minus |
BS05043.pep Sequence
Translation from 16 to 993
> BS05043.pep
MRSGLTVRPMLVVLLVGHLVDPVAPANLLTSYLPASMQALAYYIDLLQYE
PLSSTTVEPPFSADEEGMESTTANPRPSTPLPTRMRTTTTRRPIGAGASG
SGGMGWWQPPSWWETPKRSSTTERPTSPPTVPHRPAIFAPTAPPEKSLEG
NDLFAEIKDDSDFDTLPLSLIRDIQSERYDFTNDVESLDNFLRLYDDNYG
RAAFGSESAMDRWSTASIAGKKRVPPTKPYVDFLLVYDLLKRDAKAASLS
KYEGYSENLLVELHALSQVSAARQLYTLFKRMLDRGDIQRSDVVARVQGI
AKDLGNPKSPTSKALTFIPSMQFLP*
BS05043.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:10:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-PB | 325 | CG2723-PB | 1..325 | 1..325 | 1686 | 100 | Plus |
